Bsko000200.1
Basic Information
- Insect
- Bombus skorikovi
- Gene Symbol
- nfil3
- Assembly
- GCA_014737355.1
- Location
- JACXIH010000046.1:1256862-1258229[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.5e-14 3.3e-11 43.1 0.7 2 60 154 212 153 216 0.92 2 2 0.84 7.9e+02 0.3 0.1 40 52 415 427 406 431 0.59
Sequence Information
- Coding Sequence
- ATGGTGGCAGAAATTGTCGCCCGCCAGAGTGGATCGCCTATCAATGGTGAGACCGCGTGTTTGAACAGCAATATGCCGGCCACCCACACAATGGCGCACGCCGGTCACGGTGTTCATGGTGGACACGATGCCCATGGACCGTTGCCTCCGTTGACGCATCCGGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGACGCCCAACAGGTGACACACCCAGAAAATTTCCCTCCGAACTTCGACATCAGAAAAGAGCTATTTTCTCAGCGCAAGCAACGGGAGTTCATTCCGGACAACAAGAAGGACGACAGCTACTGGGACCGCAGGAGACGCAACAACGAGGCAGCCAAACGGTCCCGAGAGAAAAGGCGTTTCAACGACATGGTACTCGAGCAACGAGTCATGGAGCTGAGCAAGGAAAACCACATCCTGAAGGCGCAACTCGAGGCGATCAGGGATAAGTTCGGTATATGCGGTGAGTCTGTGATCAGCACGGAACACGTGCTCGCGGCTCTACCCGCTGACCCGCCCATCGTCAAAAGGGCGAAACTGCCAGCCTCGGCGGCTCTTCTCTACGCAAGAACACCAAGTCCTGTGCATACTTCGGTGATCCATCAACCAGTCAGTGGTGCACGATCGCCCAGGTCACCCGCGCAGCTGTACGTTCCCGAAACGACCTCGTACCCTGAGACAGAAAGTTTTCAATATCCTTATCCTCATCCGGCGATGCACCTCGACACGACCAGCGCTCTAAACCTATCTCGTGGTCGACGCGCTCAATCGCCGTTTGAATTATCATCCGGCAGCGGAGACGAAGGTCCACAATTGGTGGTCAGCTCGCAGAATCCAGCGGCTAACAACAGTCTACCTCACAAGCTGAGGCACAAATCGCGTATCGGCGACAAGGACGCGGCCAGCGCGTTACTCGCGCTTCAGGGTATCAAACAAGAACCAGGACCCAGAGCATCACCACCATGGGACAACGAAGGTTCCAGCGACGAGCGTGACTCGGGCATTTCCTTGGGCGCCGAATGGACCGGCCCCAGCGTGTCTACCGTTCCTGAGAGCGAGAGGGAAGTGAAATCGAGGCTGGACCGTCTCGCCTCCGAAGTTGCCTCCCTTCAGTCGATACTCCGCATCGGCAAGCCGACGGAGAGCAGTCTGGTCACGGGACACGCGTTACCCGCAAACGCCACAGTCAATGGGCCGTGA
- Protein Sequence
- MVAEIVARQSGSPINGETACLNSNMPATHTMAHAGHGVHGGHDAHGPLPPLTHPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAQQVTHPENFPPNFDIRKELFSQRKQREFIPDNKKDDSYWDRRRRNNEAAKRSREKRRFNDMVLEQRVMELSKENHILKAQLEAIRDKFGICGESVISTEHVLAALPADPPIVKRAKLPASAALLYARTPSPVHTSVIHQPVSGARSPRSPAQLYVPETTSYPETESFQYPYPHPAMHLDTTSALNLSRGRRAQSPFELSSGSGDEGPQLVVSSQNPAANNSLPHKLRHKSRIGDKDAASALLALQGIKQEPGPRASPPWDNEGSSDERDSGISLGAEWTGPSVSTVPESEREVKSRLDRLASEVASLQSILRIGKPTESSLVTGHALPANATVNGP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00232993; iTF_00224998; iTF_00225672; iTF_00220233; iTF_00226355; iTF_00221017; iTF_00227036; iTF_00229116; iTF_00229789; iTF_00224318; iTF_00168139; iTF_00686955; iTF_00684559; iTF_00216148;
- 90% Identity
- iTF_00229116;
- 80% Identity
- -