Basic Information

Insect: Bombus sibiricus
Gene Symbol: slc38a11
Assembly: GCA_014737505.1
Location: JACXIM010000160.1:634608-653004[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.015 1.7 9.6 0.7 2 23 732 753 731 753 0.95

2 11 0.0058 0.65 10.9 0.9 1 23 761 784 761 784 0.95

3 11 0.00033 0.037 14.8 3.3 1 23 841 863 841 863 0.98

4 11 2.8e-06 0.00032 21.3 1.5 2 23 913 934 912 934 0.97

5 11 2.6e-05 0.0029 18.3 0.8 1 23 939 962 939 962 0.96

6 11 7.2e-06 0.00081 20.1 0.3 1 23 1000 1022 1000 1022 0.98

7 11 1.2e-06 0.00014 22.5 0.9 1 23 1032 1054 1032 1054 0.96

8 11 3.4e-06 0.00039 21.1 1.2 1 23 1060 1082 1060 1082 0.99

9 11 1.7e-05 0.0019 18.9 0.2 1 23 1088 1110 1088 1110 0.98

10 11 0.00013 0.015 16.1 4.6 1 23 1116 1138 1116 1138 0.98

11 11 0.00052 0.058 14.2 0.4 1 21 1144 1164 1144 1165 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.015	1.7	9.6	0.7	2	23	732	753	731	753	0.95
2	11	0.0058	0.65	10.9	0.9	1	23	761	784	761	784	0.95
3	11	0.00033	0.037	14.8	3.3	1	23	841	863	841	863	0.98
4	11	2.8e-06	0.00032	21.3	1.5	2	23	913	934	912	934	0.97
5	11	2.6e-05	0.0029	18.3	0.8	1	23	939	962	939	962	0.96
6	11	7.2e-06	0.00081	20.1	0.3	1	23	1000	1022	1000	1022	0.98
7	11	1.2e-06	0.00014	22.5	0.9	1	23	1032	1054	1032	1054	0.96
8	11	3.4e-06	0.00039	21.1	1.2	1	23	1060	1082	1060	1082	0.99
9	11	1.7e-05	0.0019	18.9	0.2	1	23	1088	1110	1088	1110	0.98
10	11	0.00013	0.015	16.1	4.6	1	23	1116	1138	1116	1138	0.98
11	11	0.00052	0.058	14.2	0.4	1	21	1144	1164	1144	1165	0.94

Sequence Information

Coding Sequence: ATGGCTTTGGACGCGAACGAGAAGAGCTATATCCTGGACGCGAGGAACAACTACGAGGATGGTGGCAGTCTGGGTTCGGAGGAATCTTACGATGACATGCGACAACTTGTCGGGGAAAAGAACGAAGAATCTGGAAAATTCAGTAGTCTACCTCTGGCCAGTTTTAATTTCATCAATTCCATCATTGGCAGTGGTGTTATTGGTATACCCTACGCTCTTCATCAGGCTGGATTTGGCCTCGGGATAGTATTATTAATACTAGTAGCAGGCCTCACTGATTACTCTTTAATTTTAATGATTAGGAGTGGAAACATTTGCGGTGAAATGAGTTACCAGGGTTTAATGAGAGCCAGTTTCGGTCGTACAGGATTCTACATTCTTACGACTCTGCAGTTCATTTATCCATTCATAGCGATGGTCTCTTATAACGTTGTTGTCGGCGACACGGTTACGAAAGTGCTAATAAGGGTAACAGGGATGAGCGAGACAAGCATTTTCGCTCATCGTCAAGTGGTCGTCTTGTTCGCGACCGTTTGCATCACTATACCGCTGTGTCTTTATAGAAATGTTGCTCGTTTGGCCAAGATCTCGTTTCTTTCGTTGGTCTGCGTTGGTTTCATTCTATTGGCTATTTTAATTCGGATGGGTACGATGTCGGCAATTGTGCCAAGCCAAGAGGATAGTTGGCGATTCGCGAATTTCCCTGGCATTATTCCATCCGTTGGAATTATGGCATTCGCCTTTATGTGCCACCATAATACATTCCTTATCTACGAGTCTATAGAAAGGGCTACTCAACAAAAGTGGGACATCGTCACCCATTGGTCGCTCTTCACTTCCTTCGTGATCGCAACAGCTTTTGGAATCATCGGGTATGCCACGTTTACCGCATACGTTCAGGGCGATCTTATGGAAAATTATTGCTGGGACGATGATCTCATGAACTTTGCCAGAATCATGTTCAGCGGGACTATTCTACTTACTTTTCCCATTGAATGCTTCGTCACAAGGGAGGTAATACTGACAGCGATTAAAGGGACCGATGAACTCGAAGATCATACTGCATACGTCCCTAACTCCGACCGGAAATACTTGATAATAACTTTGTCGATAGTGGTTGTCGCATACCTGATATCGATGTCAACAGATTGTCTGGGTGTGGTTCTCGAATTGAATGGAATCCTCGCTGCTGTACCTCTAGCTTACGTTCTACCTGGCCTGTGCTACCTCAAACTCGAAGATGGACCAATTCTTTCTTCCAAAAAGCTTCCGGCGCTTGGTTTGATGTCCGCTGGTGTGTTTGCCGCGGTCTCTGGTTTGCTGTTGCTGATCCTGAACAACGATACATCCAGTTCCTGCGTGCATGGACAGAGGGGGAGATCGAGTCGTAGCTTGACTCCCAAATGCATTAAAATGGAAGTTTCGAAAAACGAGCAATTAGTTGATACATATGAGAAAATTTATGGAGATGAATGCCGAATCTGTTTGAAAAAAGCTGTTGAAATTTGTGAACTTTTTAAAAATGGGGACGCTATTCCTCGAAAACTTATGGCCGTTGCTTCTGTACAGGTTGCAGAAGGAGACGGTTTACCACCAGTGATTTGCTTGCCTTGTAATCAGCGTTTAGATGCATCCTACGATTTTAAATGTCAAATACAAAATTCAGATGAGAAGCTTCGTCAAATTCTAAAGCTGAAATCCTCTTCAAACGATTCTGTTACCAACGCCAGCACTATAGTTACAGCAATAATTGCTGATGTGATATCTAGTGTAATATCTTCTGAGAAAGAAAATACAGAAAAACAAGAAGTTTGTTCTACAAATTTCTGCAATGATAATTTTTGCTTTACGAAAGATGAAACAGCTTTTTGTCTCAATTCAGAGAAGAACTTGTTTTGTTACGAAAAAGAATCATCACACAGTCGATTAAACGATACAGAGCAAAGAAAGAGCCTAGAAAATGTAAATGTTTATAAAAGTTTATTAGAGGATGATTCTGTAAGACAAATCGATTCGATAAAACAAGAGTTTGTTTTATTAGACGATCATATGGTACAAACTAAAGATGTTCGATTAAAAGGAGAAGCGAGTATCGAAGAAAGTCAACAGATGTCAGAAGAGACATCAAAGACAGATAGTGTTCAAGATGATGATGATGATGAAAAACCATTAATTTCACGCACAACTAGATTACGTTGTGCACAATGTATCAAGTCTTTTCATACAAAAGTGGCTTTGCAGAGACACGCCATTGTACATAAACGTAAAACCAAATTACGTTATGTTTGTTATGTTTGCGATAAACAATATTCTACGCTTGCAAAAGTGAAAAATCATGTTGCAATTTGCCACGAAGCTCGCGATAGAAAAGAAAATATTCAACATAAGAGAATTAGTTATGAGCAAAATAAAGCAATCGCGAGTGTACAAGATAAAAGGATTAATAGTAATGTCCAAGATAAAAGAATAAAAATTCAAAAATATGATGACTCTCCTAAGGAACAACGAAAAAGCTTAAAATTTACTTGTAAAGTGTGTTCAAAACAATTTACTTATCAAAAATCTTTTATCACACACGCTAAAAGTCATCCAGAGTATAAACTGGAAGAATTAGATGATTCGTCTCAATGTTGGGTAAAAGAAAGATGTACAGAAACCGTGGTGGAAGAAGAAGAAAATGAAGAAGAGGAAGACGAAGAAGATGAGGAAGATGAAAACCTTCCTGCTGAAAGTTTACAGTGCACTCAGTGTGGGAAATTATTTGCAACAAAAAGAAATCTTAAAAGGCATGTCTCCACACATAGTGGATTAAAATATACGTGTGAAACATGTGGTAAAGGATTCTCAAGAGTGGATAAATTAAAAGATCATGAACAATCAAAGCACAAGGCTGAATTATTCGACAATTCTGATTTAGATGATAAAGAGGACACAGACAATGTAGTTAATAAAGGTGACTGTTTAGAAGGAAGAAAGAAAGATCGTCACAATAGACCTCACAAATGTGCAATCTGCCCTAAATCGTTCGCGCAAGCGCAATCGCTAGCGAATCACATAGAACGTCATAAGCGGGTAAAAGAAACTCAAAAAAGATTTCTTTGCGAAGTCTGTAGCAAGTGTTTTGCACAGAGTGGTTCTCTGGTTGCGCACATGCGTACACATACAGGAGTTAAGCCATACGTTTGTAACGTGTGTAGTAGAGCATTTACAAAGAGCACTTATCTACAATTGCATCTACGTACTCATAGTGGTGAAAAACCTTATATTTGCCAGTATTGTAGCAGGGCGTTTGCACGTGCTAACACATTAGCACGGCACATAACGATGCATACAGGGGAAGCAAAATATCATTGTCAGATTTGTACAAAATCATTTAGAAGACTGACTTCGTTGAATGAACACACTTATACGCACACTGGGCAGAGACCATATGCTTGCAAAATTTGTACAAAGAGATATAACAATGCAGGGTCACTTTACGCGCATAGAAAGAAGTGCAAGGCACAGCAATTATCTAACCCTGGATTCGCGGTTTCCGTGGAAACCTGTACTGTATCAGAACAACAAGAAGTAGACGTTCCACAAGTTTTGATCTATTCCCACAGGAAATTAGTAGAGGACGCAACTGTTGGGCAAGTCACGCCCACACCACAGTACATGCTCGCAAATGTACACAATCAGAAAAATTTGGGATCAAATATTATACAACCGTTTCCAGTGGATGATTCAAATGTTTATACAATTAATACGAAGCAATTTAAGAATCCCTATTATACAATTTATCCAAACATGTAA
Protein Sequence: MALDANEKSYILDARNNYEDGGSLGSEESYDDMRQLVGEKNEESGKFSSLPLASFNFINSIIGSGVIGIPYALHQAGFGLGIVLLILVAGLTDYSLILMIRSGNICGEMSYQGLMRASFGRTGFYILTTLQFIYPFIAMVSYNVVVGDTVTKVLIRVTGMSETSIFAHRQVVVLFATVCITIPLCLYRNVARLAKISFLSLVCVGFILLAILIRMGTMSAIVPSQEDSWRFANFPGIIPSVGIMAFAFMCHHNTFLIYESIERATQQKWDIVTHWSLFTSFVIATAFGIIGYATFTAYVQGDLMENYCWDDDLMNFARIMFSGTILLTFPIECFVTREVILTAIKGTDELEDHTAYVPNSDRKYLIITLSIVVVAYLISMSTDCLGVVLELNGILAAVPLAYVLPGLCYLKLEDGPILSSKKLPALGLMSAGVFAAVSGLLLLILNNDTSSSCVHGQRGRSSRSLTPKCIKMEVSKNEQLVDTYEKIYGDECRICLKKAVEICELFKNGDAIPRKLMAVASVQVAEGDGLPPVICLPCNQRLDASYDFKCQIQNSDEKLRQILKLKSSSNDSVTNASTIVTAIIADVISSVISSEKENTEKQEVCSTNFCNDNFCFTKDETAFCLNSEKNLFCYEKESSHSRLNDTEQRKSLENVNVYKSLLEDDSVRQIDSIKQEFVLLDDHMVQTKDVRLKGEASIEESQQMSEETSKTDSVQDDDDDEKPLISRTTRLRCAQCIKSFHTKVALQRHAIVHKRKTKLRYVCYVCDKQYSTLAKVKNHVAICHEARDRKENIQHKRISYEQNKAIASVQDKRINSNVQDKRIKIQKYDDSPKEQRKSLKFTCKVCSKQFTYQKSFITHAKSHPEYKLEELDDSSQCWVKERCTETVVEEEENEEEEDEEDEEDENLPAESLQCTQCGKLFATKRNLKRHVSTHSGLKYTCETCGKGFSRVDKLKDHEQSKHKAELFDNSDLDDKEDTDNVVNKGDCLEGRKKDRHNRPHKCAICPKSFAQAQSLANHIERHKRVKETQKRFLCEVCSKCFAQSGSLVAHMRTHTGVKPYVCNVCSRAFTKSTYLQLHLRTHSGEKPYICQYCSRAFARANTLARHITMHTGEAKYHCQICTKSFRRLTSLNEHTYTHTGQRPYACKICTKRYNNAGSLYAHRKKCKAQQLSNPGFAVSVETCTVSEQQEVDVPQVLIYSHRKLVEDATVGQVTPTPQYMLANVHNQKNLGSNIIQPFPVDDSNVYTINTKQFKNPYYTIYPNM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00141354;
90% Identity: iTF_00233379;
80% Identity: -