Bsib002550.1
Basic Information
- Insect
- Bombus sibiricus
- Gene Symbol
- Mblk-1
- Assembly
- GCA_014737505.1
- Location
- JACXIM010000211.1:3287648-3302130[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.8e-18 9.9e-15 54.4 0.1 1 45 591 636 591 636 0.96 2 2 1.2e-18 3e-15 56.0 0.0 1 43 1038 1081 1038 1083 0.94
Sequence Information
- Coding Sequence
- ATGTCCGAATGTAACAAGTTGACAAATTACAACGAGAGAAAAAAAAAATCAGTCTTCGTATGGTCATACCGAAACAAAAATACACAAGTCTGTCTGGAACGGGTAGCGGAGGAGTTGATGGGCCGTAGGAGATGGAAGCATTATCAGGACACCCTGTACAGCGGTACTCGCAGCAGCGAATCAGTGACGGCACAGCCCCACCACCGGCTCTACCCGGCGTTCTCGTCGTCCTGCGACCCGGTGGTGCCCGGGAATTTGGAACAAATTGGGTCGCGTCCGCTTCATCCTGCGTCCTCCTCGTTACCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCCCGATCAAGCAGGAGAGCCTGCAAAGGCATCACCTGCAGAACCACCATCACCTACAGCCCTCCGCCGTTCAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCGCCTAAGGCCAGACGAGATCAAAGTCGAGGTCGGCGAGGACGAGTTCGCGAACGGTGTCGCCCGAGAGGAATCGGCTACGAAGACCGCGGATACGTCGACGACGACCACGGTAACGACGGGCACAACGACCACGTCGACGACGACGACAACGGGAACGAGCATACTTGCTACCAGTACCGCGACCGGCACGATCGCGACGATCACCACGCCGAATACCACCGCCGTTATGACCACGGGAACCACGACGATCGCGACGAGGCGGCGACGCAAACGCCGGCAGAACGACGGAGAGGCCACCGACGACAGAGAGGACGACGAAGAGAACGAGGAAGAGGAGGATGGAAGGGGGCAGGCCGAAGCGGAAAAACGGCTGAAGCTCGACGAAGACGCCGACAGGCCCGTCAGTCCTCTGAGAAGGGAGAACGATCGAGGATCTCGGGATTATCCGACTGCCAACGCTACAGATACGGAAGGGACCAAGGAACGAACGGAAGAAGTCGCGTTGGAGCGGACACCGGTGACGCAGGGTTCATTGAGAGTGAAAACGGAGGAGGAGTTGCAAGGAGTGCCGAGTTCTGGAGGCGGTCCAACGATATTGACGACACCGACGCCGGATTCGGATGCGATCAGGTCAGGGTTGCCGTGTCGGGAGGTTGAAGCAGCCGCTAGAAACGCGGTACCGCCGTTTCTTATTGGAAGCCGACGCATCAGCCCACCGCCAGAAGACTGGAAGCCGCTAGACAAATGTTACTTTTGCCTGGACGGCAAGCTACCGCACGATGATCAACCACCTCTCAGTCCGCAGAGCGACAGTAGCAGCAGCTCGCGATCGGCCGAGTCACCGATGTCGGTCCAGGTGGACCCGATGGCGGCGTCCGTGGTCGCCGCGGCTCTCACCGGTACCTACCCTACCTTACTGCCTCAGTGGTGTCTGCCACCAAGGGAGGCGCCTCTCGTTGGGGTGCAGCCTCATCAGGACAGTGCAACGCCAGCCGATCAACCTCTCGACCTCTCGGCCAAACCGAAAAATTCTCAGGATAACAACATATCTCTATTGGAACAACAGAAAATACCTCTGAGGATGACAGCAGGTATCGACCCCAAGAGTATCTTTAATTCTTGTTATCGTGCAAAACCACGTATGACCGGGCCAGTGGCGGCCGTGGCGGCGGCAGCAGCAGCTGCGGCAGGCGTCGGTGGTGTCCCCGTGGTGGGTGCCGGGGGTGGCCGGAGGGCCTACACCGAGGAGGAACTGCAAGCCGCGCTCAGGGATATCCAGAGTGGCAAGCTCGGCACACGAAGGGCGGCCGTGATCTACGGGATACCGCGTAGCACCCTGCGCAACAAGGTCTACAAGCTTGCGATGGAACGCGAAAGGGACGCGTCCCTGTCTAGCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATACGACCCAAAACGCCTCCGCGACCACTCCGCCCCCGCAAGTGGATGAGTTTAACACACGGCCGCTTGGTCTTGGCGAGGTTGCAAGACTCGAGGTGGACGACAAAGAACTGTCCGGAGCGGAAGAGGAGAAAGAAGTGGAGAAAGCTCTGTTGAAGCCACTGTTGTCCTTGGAAGACCTTGTCAGGTTTTCCGCCCTCGAAGGAAGCGGCGGTGATTCCCTCAGAACGTTGCTGCAACGAGGACACGAGACGGGAGCCGAGTGGCCAGGGCTCGAACACGCCAACATCGGCCCGTATATTCAAAAGATGCTTGCAGCAGCTGCGCCATTTAAAGGCATGGAGACGCAAGACTATCGCATTCCAGAGGTGATGAGAAGGCTGATGAGCGAAGACAAGAGGCTAAACAAAAGCGTAAACGGGGACCAGTCGCAGCCACCGCATCAGCAGCTCCATCACCATCAACCGCACTCGACGCACCCGCAAGCCCAGGCACAGTCGCAGACGCAGCAGCAGCAGCAACGTGGCCCGATGACGAACGACGACTTCAACCCAAATATCGAGGAAGAGGCGAGCGACAGTGCTCAAGGCAGAGCGATCCTCAAGATTCCGTCCTACAAGCCCGCGAGCACGCCTGGATGTTCGAGCAAAAACGGCGAGCCAACTTCGGCCGCATTCGCGCAAGGATTCGCGGCCGCGACAGCAGCCTCGAGTCCGGGTCTCCTGGAACGAGCGAGTCCGGCGTTCTCCGGCACCAGTAGCCCAACCAACTCGTTGGTGGGGAAAACGGTGGCCGTGAATTTCCGCGACGTGATCGCGAAAAGCATCAGCGTCAAATTCCAAGAGGGTCAAACGGTCGCGACAGCCGGAATGCCCGGATGTCAACCGGCCGGAGTGGTACAGTCGCAGCAAGCGATAATGACGGATCCAAGTCCGTTCAAAAGAGGCAGATACACACCGCCTCAGCCGGCGTCGCAGCAAGCCCAGTCGCAGGCGAAACCGCAGGCCCAAGAAGCGAACAAACCGAAACCAGCTACCGGTGGCAAAGGAACCAGACCGAAACGCGGAAAGTATAGGAACTACGACAGGGATAGCCTGGTGGAGGCTGTGCGCGCGGTTCAGCGGGGTGAAATGAGCGTGCATCGTGCAGGCAGCTATTACGGAGTGCCACACTCCACCCTCGAGTACAAAGTTAAGGAACGGCACCTGATGAGGCCAAGGAAGAGGGACCAGAAGCAGTCGGACGATAAAACGAAAGAGACCTCAGCCGTGGCAGCGGCGGCAGCAGCCGCGAACATACGACCAGGTACGGCGGACAAGAAACCACAATTAAAGCCACAGAAACCGTTCACGTCACCGGGCGGTATCCCAGGACCGAACGGGATCAAGATGCCGCCGTTCATAGAAGGCATGCCTCATTTGCCATTCACGCCGTTCAATTTCTGGAGTCCGCCGCCGTTCATGCCATCGCCGTTCATGGCAGGAGCGCCGAACGTTCCAACGATCCTACCGGAACAGTACTTCGCGACGAGTAGGATCCGCGGTCTGCAGGAACAACAAAGGAACGCGGCCATGGTGCAGCAACAACAACAACACCAACAACGTGACAGGGACGGGATAGGCGTCGCTGCTGGCACCGCTGAATCACCTGGAACCTCGAATTCTCGTAGCACGCCGATGAGCAAACCATCACGGGAGGTATCCGAGAGCTTGTACGATGGTTCGGGAGCGAACGGCAGTTTCTTGGACAATTTGATCAGGTCGAGCCTCGAGACGGGAATTCCAAGGGACCAGAGGGCAATGACCGACGCGAGGAACCAGCAGCAGTCGTCCTCGCAGCAACAACTCCCGGAATCGATGAGGGGCAAAACGTTGATCGATCAACTGTGCAGAAACTCGAGGAGAACGCCGGTGTCGAGGCTGACTCAGGATAGCAGCGAGGACGAGAGCTACAGGGGACCATCGACAACCGGTAGGCCGATCCCGGAAAGACCGGAACGCGTGCCCACCGTCGACCTTAGCCCGTCACCGTCGGAACGTGGCCGGAACGACGACGGCAGCGATCGACTCACCATGGAAGACTCCGTTGAGCAGTAG
- Protein Sequence
- MSECNKLTNYNERKKKSVFVWSYRNKNTQVCLERVAEELMGRRRWKHYQDTLYSGTRSSESVTAQPHHRLYPAFSSSCDPVVPGNLEQIGSRPLHPASSSLPXXXXXXXXXXXXXXXXXXXXXXXXXGPIKQESLQRHHLQNHHHLQPSAVQXXXXXXXXXXXXXXXXXXXXXXXXRLRPDEIKVEVGEDEFANGVAREESATKTADTSTTTTVTTGTTTTSTTTTTGTSILATSTATGTIATITTPNTTAVMTTGTTTIATRRRRKRRQNDGEATDDREDDEENEEEEDGRGQAEAEKRLKLDEDADRPVSPLRRENDRGSRDYPTANATDTEGTKERTEEVALERTPVTQGSLRVKTEEELQGVPSSGGGPTILTTPTPDSDAIRSGLPCREVEAAARNAVPPFLIGSRRISPPPEDWKPLDKCYFCLDGKLPHDDQPPLSPQSDSSSSSRSAESPMSVQVDPMAASVVAAALTGTYPTLLPQWCLPPREAPLVGVQPHQDSATPADQPLDLSAKPKNSQDNNISLLEQQKIPLRMTAGIDPKSIFNSCYRAKPRMTGPVAAVAAAAAAAAGVGGVPVVGAGGGRRAYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDASLSSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTTQNASATTPPPQVDEFNTRPLGLGEVARLEVDDKELSGAEEEKEVEKALLKPLLSLEDLVRFSALEGSGGDSLRTLLQRGHETGAEWPGLEHANIGPYIQKMLAAAAPFKGMETQDYRIPEVMRRLMSEDKRLNKSVNGDQSQPPHQQLHHHQPHSTHPQAQAQSQTQQQQQRGPMTNDDFNPNIEEEASDSAQGRAILKIPSYKPASTPGCSSKNGEPTSAAFAQGFAAATAASSPGLLERASPAFSGTSSPTNSLVGKTVAVNFRDVIAKSISVKFQEGQTVATAGMPGCQPAGVVQSQQAIMTDPSPFKRGRYTPPQPASQQAQSQAKPQAQEANKPKPATGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDQKQSDDKTKETSAVAAAAAAANIRPGTADKKPQLKPQKPFTSPGGIPGPNGIKMPPFIEGMPHLPFTPFNFWSPPPFMPSPFMAGAPNVPTILPEQYFATSRIRGLQEQQRNAAMVQQQQQHQQRDRDGIGVAAGTAESPGTSNSRSTPMSKPSREVSESLYDGSGANGSFLDNLIRSSLETGIPRDQRAMTDARNQQQSSSQQQLPESMRGKTLIDQLCRNSRRTPVSRLTQDSSEDESYRGPSTTGRPIPERPERVPTVDLSPSPSERGRNDDGSDRLTMEDSVEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00215624;
- 90% Identity
- iTF_00215624;
- 80% Identity
- -