Basic Information

Insect: Bombus sibiricus
Gene Symbol: ct_1
Assembly: GCA_014737505.1
Location: JACXIM010000008.1:1217261-1241206[-]

Transcription Factor Domain

TF Family: CUT
Domain: Homeobox|CUT
PFAM: PF02376
TF Group: Helix-turn-helix
Description: The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 5.4e-28 6.3e-24 84.2 0.0 2 72 441 512 440 517 0.95

2 3 1.3e-32 1.5e-28 99.0 0.0 3 77 848 923 846 925 0.96

3 3 5.4e-31 6.3e-27 93.8 0.0 3 75 1079 1152 1077 1156 0.95

#	of	c-Evalue	i-Evalue	score	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	5.4e-28	6.3e-24	84.2	2	72	441	512	440	517	0.95
2	3	1.3e-32	1.5e-28	99.0	3	77	848	923	846	925	0.96
3	3	5.4e-31	6.3e-27	93.8	3	75	1079	1152	1077	1156	0.95

Sequence Information

Coding Sequence: ATGTCAGTGTATCATAAAGATATCAGTCAGCTGGTCGAGGAAGTGTCCAGGTTACAGCAGAGCCTGCAGCGTCTTCAAGAGACGAGCGCACAGGCGACGGCGCGGCTCGAGGAAGAACTCGAGGCGCGCAGACAGCACATCAACAGACTAGAGAGCAAACTAGAACGACAGAGGGACTATGACGACCTAAAACGCGAGATAAACGCACTAAGGTCGGTCGATCTCTCACAGATACCAACCGGTGAACCTGGCAAGAGCTTGGAGCACCTTCTAATGGAACGCTCGAAGGCGCTTCAGCAAACCGAGAGCTTGAAGCCATCCAATACTCCGGACGCGCTCGGTGGACTATCGTCACCCCTGCAGCGCGCCTCAACCGCCTCACCCCACGGGGTCGGAGGTGTGCCGCCTTCGTCCCACGTGTCCTCCCAGCAACCACCGCCACCGCCCCCAGCAGCAGTCTCCCTACCTCCGCGTTCCACTCCGACACCATCTTCGGCCACCTCGACGACATCCAGCCTCCTCTTCCCACCTCCTCTGCAAAACGTCGAGACCTTCGGCTCCTTCCTCGGCGAAGAGATCGTCGCCAACTGGAGGCGGACGTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTAAATCATCTTCCATCGCCAACGGATCCATCATCCAGCTCCAACACGCCAGCCAAGTCGAACACCCCGTTAGGAACCACTCCATTGAGTTGCCTTGACGCCGAGAAGGCACCGACCCCGGTGTCCGGACACGAAACACCCGCACCACCTACCCCATCTTCTACCACCGCGTTGACATCACCGCCGAGCTTTCAACCGCCGACGTCGATGGTCGAGACAACCACCTCCTCCGCTTCCGTGAACGGTGGAAGCGTGACACCCGCCGTTTCAACGGCACCACCACCTAAGAGCCCAGCAGACCAGGAATCCTGCCACAATAACAACAACAGCCACCATCTAGCGAACAACAACATCGGAGGTCTGAGTGTGCTGGACACACTGAAGAGCCCGTTTCGGTTCGACGACAGGACGCATCCGTTTCGATTCAGCGACGAATTCGGTGCTGCTGGAATGGCTGGAAGATTGGGTGAATCGCTCATCCCAAAGGGCGACCCTATGGAGGCAAGGTTACAAGAGATGCTACGATACAACATGGACAAGTACGCCTCGCAGAATCTAGACACGCTGCACATAGCCAGGAGGGTCAGGGAGCTGCTGTCGATACACAACATCGGTCAAAGGCTGTTTGCCAAGTATGTGCTCGGCCTCAGCCAAGGAACCGTCAGCGAGTTGCTAAGCAAACCGAAGCCTTGGGACAAGCTGACGGAAAAAGGTCGCGATAGCTACAGGAAGATGCACGGCTGGGCGTGCGACGAAAACGCTGTAATGCTGCTTAAATCTCTGATACCCAAGAAAGGCAAGGAGCAGGGAATGCCAGCGTTCGCGCGTGGTCCACAGGAAGGTGGTCCGCCGGAAATGAGTGACGAAAGGTTGGCGCATATCCTCTCGGAATCGGGCCACCTACAGATGAGGGGTGAGCACGAGGTGTCGAACGACGCGGACAGCAAAAGTCCGAATAGAATCGGTTGTCCGAGCCCATTTAACAAAGACAGGCTCGACAGTCAAAATAGGAGACTGAAGAAATACGAGAACGATGACATTCCGCAAGAAAAGGTAGTCAGGATTTACCAGGAGGAGCTGGCTAAACTTATGGGAAGAAGGGTGGAGGATCTACGTGGACCCAGAGAGTTCTCTTCCAGCGCGATGTTCCCGCACTTTTTCAGCGGCACGCAAGGTGGTCTTCAGGGTATAGAGCGGACGCAGGAGGACATCAGGTTGGCGCTTGACGCGTACCACCGTGAACTACAGAAGCTGAACGCGACGCCAGGTCAGAATCCTTCGTTGACAGGACTGCCAGGATTACCTGGCCTACCTGGCCTCTTGGCTCTACAGCAGCAAGCGCTTCAACAACATCATCTCGCTACAAACGGTGGTGGTGTCCAAGATCTGAGTCTCGGTAAAGTCGATCCAAGAAATAAGATGATAAACGGAGTGTCCGAGGAGGAGAAAGAGAAGATAGAGGAAGCAATGAGACACGCAGGAAGCGCTTTCTCGTTGGTCAGGCCAAAACAGGAACCAACCACCGCACCCCAATCGACGCCAGGTGGATCTAGCGCGAGTTCACCGCTTGGCAACTCGATTCTTCCACCAGCAATGACACCTAGCGAGGAATTCTCGGGTGCAGCGGCGGCCAGTCCTCTTCAGAGGATGGCCTCTATCACGAATAGTCTGATCAGTCAACCGTCCACGCCTACCCACCACGCGGCCAACCAGAGGCCACTGAAAGCTGTACTTCCTCCCATTACCCAGCAACAGTTCGACTTGTACAATAACTTGAACACAGAAGACATTGTTAAGAGAGTGAAGGAGCAGTTGTCTCAATACTCGATCTCGCAACGTCTGTTCGGTGAATCCGTGTTGGGCCTGTCGCAGGGTTCCGTGTCAGATCTGCTGGCGCGTCCGAAGCCATGGCACATGCTGACGCAGAAAGGCCGCGAGCCCTTCATCAGGATGAAGATGTTCCTCGAGGACGATAACGCGGTGCACAAACTGGTCGCCAGCCAATACAAGATCGCGCCAGAGAAGTTGATGAGGACCGGCGGCTACGGTGGCCTGCCTCGTAAGTTTAACTCAGCCTGTGGAACACCAATGAAGCCAATGCCTCCGACGAAACTGGTACAGGAACAGCTACAGAACGCAGCGAAGGCGCAAGCAGCGGCGCAAGCTGCAGCTCAGGCAGCAGCGCAACACCAGCAGGAGAATCAAATGCAGCTTGGTCCGCCTCAACAGAGTCCGCAACACCCTCAACACCCACAGCCACCACCGCCAATGATGCTGACACCACCTGGACCTCATCATCCCCATTCACAGCTCAGCATGCAGGAACTGCAGAAAAAGCAACAGCAACAACAGCAACAGCAGATGAACCTCCATTCCCCGCATCACCAGATGACCCCATCACCTCTCCGTGGTCTTCATCCACATATCTCGCCGAGTGTATACGAAATGGCCGCGTTGACGCAAGATCTGGACACGCAGACGATCACGACGAAGATCAAAGAAGCGTTGCTGGCCAATAATATCGGCCAGAAGATCTTTGGCGAGGCTGTGCTCGGACTGTCGCAAGGCTCGGTCAGCGAATTACTCAGCAAACCAAAGCCATGGCATATGCTGAGCATAAAGGGCAGAGAACCTTTCATAAGAATGCAATTGTGGTTATCGGATGCGCACAACGTGGACCGGTTACAGGCGCTGAAAAACGAGCGTAGAGAGGCGAACAAAAGAAGGCGTAGCAGCGGGCCAGGTCACGATAATAGTTCGGACACGTCGAGTAACGACACGGCCGAGTTCTATCACGCAGCGTCACCCGGACCTGGACCAGCCTCCGCTAAGAAGCAAAGAGTCCTCTTCTCCGAAGAACAGAAAGAAGCACTGAGGCTTGCCTTCGCGCTCGATCCATATCCCAACGTGGCCACCATCGAGTTCCTCGCTGGTGAACTAGCGTTATCCTCGCGGACGATAACCAACTGGTTTCACAATCATCGGATGAGACTGAAACAGCAGACACCGCACGGTCAGCCGGAGCCTCAATCGCCAAGAGAGCCTGGCCAGCCATTCGACCCAGTTCAGTTTAGATTGCTGTTAAACCAAAGACTGTTGGAGATCCAAAAAGAGAGACTAGGCTTGGGCAACGTGCCTCTGCCTTACACGCCGTACTTCAACCCTAATCTGGCTGCCTTAGTAGGGAACGCGCTCAAGGAACAGTGTTCCGGACTGGATCTTTCTATGAACGCTCTGAAGAGGGAGCCAAACCAAGAATTCGAGGACGAGGATGTGGAAGACGCTATGAGCAATCTCGGTAGTGAGGATTCGGAAGGATCTGCGGGGAGTATAAAGAGAGAACCGGCGGAAACGCCTACAGCACCGGCCACTGTCAGATCGAACAGAAGAAAACCTGCAGCGCCGCAGTGGGTGAATCCTGAGTGGCAGGAACCAGCCAGAACAGGGGACGAAGTGATCATCAATGGTGTCTGCGTGATGCAAACGGATGATTACGGCGTTAAGAGAGAAGCCGAAGAAACGATTAGGGTAGAACCGACTCCGGTACAGGACAGATACGAGGAAGACGCGCAAAGTGACGTGTCTTCTGTTTCTGGAAACAACGGTCAGGACCGAGATAGCCCTCTGCCCAGTCCAAAGTCTGGACAGAACAGTCCGGTGACCTCGCCCAGGCCACCCTCGACGCAGCAGACGCAGCAGTCCACCGATGAGAGCCCCAAGGACAGCGTGGTGAAACACGAACCCGAGGAAACGTGGGATTATTAA
Protein Sequence: MSVYHKDISQLVEEVSRLQQSLQRLQETSAQATARLEEELEARRQHINRLESKLERQRDYDDLKREINALRSVDLSQIPTGEPGKSLEHLLMERSKALQQTESLKPSNTPDALGGLSSPLQRASTASPHGVGGVPPSSHVSSQQPPPPPPAAVSLPPRSTPTPSSATSTTSSLLFPPPLQNVETFGSFLGEEIVANWRRTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNHLPSPTDPSSSSNTPAKSNTPLGTTPLSCLDAEKAPTPVSGHETPAPPTPSSTTALTSPPSFQPPTSMVETTTSSASVNGGSVTPAVSTAPPPKSPADQESCHNNNNSHHLANNNIGGLSVLDTLKSPFRFDDRTHPFRFSDEFGAAGMAGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDENAVMLLKSLIPKKGKEQGMPAFARGPQEGGPPEMSDERLAHILSESGHLQMRGEHEVSNDADSKSPNRIGCPSPFNKDRLDSQNRRLKKYENDDIPQEKVVRIYQEELAKLMGRRVEDLRGPREFSSSAMFPHFFSGTQGGLQGIERTQEDIRLALDAYHRELQKLNATPGQNPSLTGLPGLPGLPGLLALQQQALQQHHLATNGGGVQDLSLGKVDPRNKMINGVSEEEKEKIEEAMRHAGSAFSLVRPKQEPTTAPQSTPGGSSASSPLGNSILPPAMTPSEEFSGAAAASPLQRMASITNSLISQPSTPTHHAANQRPLKAVLPPITQQQFDLYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAQHQQENQMQLGPPQQSPQHPQHPQPPPPMMLTPPGPHHPHSQLSMQELQKKQQQQQQQQMNLHSPHHQMTPSPLRGLHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHAASPGPGPASAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELALSSRTITNWFHNHRMRLKQQTPHGQPEPQSPREPGQPFDPVQFRLLLNQRLLEIQKERLGLGNVPLPYTPYFNPNLAALVGNALKEQCSGLDLSMNALKREPNQEFEDEDVEDAMSNLGSEDSEGSAGSIKREPAETPTAPATVRSNRRKPAAPQWVNPEWQEPARTGDEVIINGVCVMQTDDYGVKREAEETIRVEPTPVQDRYEEDAQSDVSSVSGNNGQDRDSPLPSPKSGQNSPVTSPRPPSTQQTQQSTDESPKDSVVKHEPEETWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01394913;
90% Identity: iTF_00982081;
80% Identity: iTF_00227166;