Basic Information

Insect: Bombus pascuorum
Gene Symbol: pnr
Assembly: GCA_905332965.1
Location: HG995280.1:6688953-6695760[-]

Transcription Factor Domain

TF Family: zf-GATA
Domain: zf-GATA domain
PFAM: PF00320
TF Group: Zinc-Coordinating Group
Description: This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 0.55 1.8e+03 -1.0 0.2 2 13 230 246 230 253 0.75

2 2 9.5e-17 3.1e-13 49.4 5.1 1 35 417 450 417 451 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	0.55	1.8e+03	-1.0	0.2	2	13	230	246	230	253	0.75
2	2	9.5e-17	3.1e-13	49.4	5.1	1	35	417	450	417	451	0.98

Sequence Information

Coding Sequence: ATGTTCGATGTACCGCCCAAGTTCTACGAGCTGTGTCGCCTTTGTTTATCGTCGGACGGTGTCAAATTGTCCATATTCGAAGAGGAAGGCGCCCAGCGGAACTTCGCCGATAAGATACTGACGTGCCTCTCGATTACGGTAAAAGATGGAGATTCTTTGCCACCAATCATTTGTCACCGGTGCGTATACAAGTTGGATGTACTGCACAACTTCCGTGAAGTGTCACACAAATCTGATGTCATACTCAAACAGTACCTGGATTATGCCAAGCAGTTATCATCACATGATGATCAGAAGAAATCTTTCTCCACTGCCAAAGTAGCAGGCTTAAGTCCTCTACAGTCATTTCTCCAATTGAACAAAACATTGTTCAATGAGGAGCCTAACTCTCCGGCCAGCATTAATCAAAACGTTATACCTCAGACTCAAACACATCATTTGGAGTTGTGCACCAATGACATGCCTGAGCATGATAATATTAAGTGTGAACCAGAAGATGATACGTGTTCAAATAGTTCTGATCCAGACAGATTAGAAATAGAAGATCGAGATGAACAAGATACTGAGGGGGAAGAAAATGGTTATGATATGACCATTAACAAAAGAATGAAAGTAGAAACGAATTACGATGAATCAAAAGCAAGTACCCCTAATCGCAGTCCAGTAAATAGAATGGATACACCAGAAAGTAATTGTTCAGATACAAATATTGATCAAGAAACAACAAAGTTGTGGCAAGCATTAGCAAACAACAGGAGTTTAGAGATTACTAGGACAAATGGTGACAAACTAAATAATGGGTTTACTGGTGAAGCGACTAATTTACTGCGTTCCCTGATCAACAACAGACAAATCGGTATTACTGCCGTTGATTCGGGCAGAATATCTCCGCAAATTAGGTTTTACAGAGACACCCAGGGGACAACGATCGAACGTACCGTACCCGACTGTTCTGTACTCGGCAATCGTACTAATGTTTCGTGTATAGAAAACAAGGGTACATCCGTGGACAGTAATCCGTCGAGCCCTGCCAGTATCGGTCGGAAGGAGACCAAGTGTCGTAGAAAACAAAGTTATCCTAGTAAAGCTCCAATGAGTCCAGACGTTGTTAATTATCAACATGAATCTAATGAAGAGCAAGCACAAGACTTTACAGCATGGTCAAATAAAATGAAGGGAAAAGTGGAGGACCAGAAACAACAATTTGATCAACACAGTGGTAATATGGCGAAAAAGGTAGATATGTCCTGTACAAATTGCGGCACCATGACCACAACCATTTGGAGAAGGAATATGAAGGGGGAAATGGTTTGTAACGCTTGTGGGCTCTATTACAAACTGCATGGAGTAAATCGTCCAGTTACCATGAGAAGGGACACAATACATACACGTAGACGCAGACCCAAAGGCGAGAAACCGACAAGGCATAGAAAAAAAGGTGACTCAATTTTGGCACCACAATCAGAGCAAATGGATGCAGAAAGTGCGGACATGTTGGCAGCTCTTCGTCGACAAATTCAACCCCATTTGATGATGGCTGCATTAACGCCACCACGTATACCTGGTGCCCATCCACCAACCCCTACCGCTCAACTTAATTACTCTCTTCCCTTACCTAGTTATATGATGCATCATGTAAAGGCAGAAGGGCGAGAACAATGTCATCTATCAACGGAAGCAGAAGAAACTGAAGGAGGAGATGAAGAAAATGTCTCGGACGTACCATTGAATTTAGTTGCGACGTCGTTATCCGAAGAAGCACACTGA
Protein Sequence: MFDVPPKFYELCRLCLSSDGVKLSIFEEEGAQRNFADKILTCLSITVKDGDSLPPIICHRCVYKLDVLHNFREVSHKSDVILKQYLDYAKQLSSHDDQKKSFSTAKVAGLSPLQSFLQLNKTLFNEEPNSPASINQNVIPQTQTHHLELCTNDMPEHDNIKCEPEDDTCSNSSDPDRLEIEDRDEQDTEGEENGYDMTINKRMKVETNYDESKASTPNRSPVNRMDTPESNCSDTNIDQETTKLWQALANNRSLEITRTNGDKLNNGFTGEATNLLRSLINNRQIGITAVDSGRISPQIRFYRDTQGTTIERTVPDCSVLGNRTNVSCIENKGTSVDSNPSSPASIGRKETKCRRKQSYPSKAPMSPDVVNYQHESNEEQAQDFTAWSNKMKGKVEDQKQQFDQHSGNMAKKVDMSCTNCGTMTTTIWRRNMKGEMVCNACGLYYKLHGVNRPVTMRRDTIHTRRRRPKGEKPTRHRKKGDSILAPQSEQMDAESADMLAALRRQIQPHLMMAALTPPRIPGAHPPTPTAQLNYSLPLPSYMMHHVKAEGREQCHLSTEAEETEGGDEENVSDVPLNLVATSLSEEAH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01538418;
90% Identity: iTF_00862241;
80% Identity: iTF_00224238;