Basic Information

Insect: Bombus pascuorum
Gene Symbol: slc38a11
Assembly: GCA_905332965.1
Location: HG995279.1:12881122-12899809[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0059 0.62 11.0 1.2 2 23 666 687 665 687 0.95

2 11 0.0056 0.59 11.0 0.9 1 23 695 718 695 718 0.95

3 11 0.0014 0.15 12.9 3.0 1 23 775 797 775 797 0.98

4 11 2.8e-06 0.00029 21.4 1.5 2 23 847 868 846 868 0.97

5 11 2.5e-05 0.0027 18.4 0.8 1 23 873 896 873 896 0.96

6 11 7e-06 0.00074 20.2 0.3 1 23 934 956 934 956 0.98

7 11 1.2e-06 0.00012 22.6 0.9 1 23 966 988 966 988 0.96

8 11 3.3e-06 0.00035 21.2 1.2 1 23 994 1016 994 1016 0.99

9 11 1.7e-05 0.0018 19.0 0.2 1 23 1022 1044 1022 1044 0.98

10 11 0.00013 0.013 16.2 4.6 1 23 1050 1072 1050 1072 0.98

11 11 0.0005 0.053 14.3 0.4 1 21 1078 1098 1078 1099 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0059	0.62	11.0	1.2	2	23	666	687	665	687	0.95
2	11	0.0056	0.59	11.0	0.9	1	23	695	718	695	718	0.95
3	11	0.0014	0.15	12.9	3.0	1	23	775	797	775	797	0.98
4	11	2.8e-06	0.00029	21.4	1.5	2	23	847	868	846	868	0.97
5	11	2.5e-05	0.0027	18.4	0.8	1	23	873	896	873	896	0.96
6	11	7e-06	0.00074	20.2	0.3	1	23	934	956	934	956	0.98
7	11	1.2e-06	0.00012	22.6	0.9	1	23	966	988	966	988	0.96
8	11	3.3e-06	0.00035	21.2	1.2	1	23	994	1016	994	1016	0.99
9	11	1.7e-05	0.0018	19.0	0.2	1	23	1022	1044	1022	1044	0.98
10	11	0.00013	0.013	16.2	4.6	1	23	1050	1072	1050	1072	0.98
11	11	0.0005	0.053	14.3	0.4	1	21	1078	1098	1078	1099	0.94

Sequence Information

Coding Sequence: ATGGCTTTGGACGCGAACGAGAAGAGCTATATCCTGGACGCGAGGAACAACTACGAGGACGGTGGCAGTCTGGGTTCGGAGGAATCTTACGACGACATGCGACAACTTGTCGGGGAAAAGAACGAAGAATCTGGAAAATTCAGTAGTCTACCCCTGGCCAGTTTTAATTTCATCAATTCCATCATTGGCAGTGGTGTTATTGGTATACCCTACGCTCTTCACCAGGCTGGATTTGGCCTCGGGATAGTATTATTAATACTAGTAGCAGGCCTCACTGATTACTCTTTAATTTTAATGATTAGAAGTGGAAACATTTGCGGTGAAATGAGTTACCAGGGTTTAATGAGAGCCAGTTTCGGTCGTACAGGATTCTATATTCTTACGACTCTGCAGTTCATTTATCCATTCATAGCGATGGTCTCTTATAACGTTGTTGTCGGCGACACGGTGACGAAAGTGCTAATAAGGGTAACAGGGATGAGCGAGACAAGCATTTTCGCTCATCGTCAAGTGGTTGTCTTGTTCGCGACCGTTTGCATCACTATACCGCTGTGTCTTTATAGAAATGTTGCTCGTTTGGCCAAGATCTCGTTTCTTTCGTTGGTCTGCGTTGGTTTCATTCTATTGGCTATTTTAATTCGGATGGGTACGATGTCAGCAATTGTGCCAAGCCAAGAGGATAGTTGGCGATTCGCGAATTTCCCCGGCATTATTCCATCCGTTGGAATTATGGCATTCGCCTTTATGTGCCATCATAATACATTCCTTATCTACGAGTCTATAGAAAGGGCTACTCAACAAAAGTGGGACATCGTCACCCATTGGTCGCTCTTCACTTCCTTCGTGATCGCAACAGCTTTTGGAATCATCGGATATGCCACGTTTACCGCGTACGTTCAGGGTGATCTTATGGAAAATTATTGCTGGGACGATGATCTCATGAACTTTGCCAGAATCATGTTCAGCGGGACTATTCTACTTACTTTTCCCATTGAATGCTTCGTCACAAGGGAGGTAATACTGACGGCGATCAAAGGGACCGATGAGCTCGAAGATCATACTGCATACGTCCCTAACTCCGACCGGAAATACTTGATAATAACTTTGTCGATAGTGGTTGTCGCATACCTGATATCGATGTCAACAGATTGTCTGGGTGTGGTTCTCGAATTGAATGGAATCCTCGCTGCTGTACCTCTAGCTTACGTTCTACCTGGCCTGTGCTACCTCAAACTCGAAGATGGACCAATTCTTTCCTCCAAAAAGCTTCCGGCGCTTGGTTTGATGTCCGCTGGCGTGTTTGCCGCGGTCTCTGGTTTGCTGTTGCTGATCCTGAACAACGATACTTCCAGTTCCTGCGTGCATGGACAGATTGCAGAAGGAGACGGTTTACCACCAGTCATCTGCGTGCCTTGTAACCAGCGTTTAGATGCATCGTATGATTTTAAATGTCAAATACAAAATTCAGATGAGAAGCTTCGTCAAATTCTAAAGCTGAAATCCTCTTCTAACGATTCTGTTACCAATGCCAGCAGCATAGTTACAGCAATAATCGCTGATGTGATATCTAGCGTAATATCTTCTGAGAAAGAAAATACAGAAAAACAAGAAGTTTGTTCTACAAATTTCTGCAATGATAATTTTTGCTTTACGAAAGATGAAACAGCTTTTTGTCTCAATTCAGAGAAGAACTTGTTTTGTTACGAAAAGGAATCATCGCACAGTCGATTAAACGATACAGAGCAAAGAAAGAGCCTAGAAAATGTAAATGTTTATAAGAGTTTATTAGAGGATGATTCTGTAAGACAAATCGATTCGATAAAACAAGAGTTTGTTTTATTAGACGAACATATGGTACAAACTAAAGATGTTCCATTAAAAGGAGAAGCGAGTATCGAAGAAAGTCAACAAATGTCAGAAGAGACATCAAAGACAGATAGTATTCAAGATGATGATGATGATGAAAAACCATTAATTTCACGCACAACTAGATTACGCTGTACACAATGTATCAAGTCTTTTCATACAAAAGTGGCCTTGCAGAGACACGCCATTGTACATAAACGTAAAACAAAATTACGTTATGTTTGTTATGTTTGCGATAAGCAATATTCTACGCTTGCAAAAGTGAAAAATCATGTTGCAATTTGCCATGAAGCTCGCGATAGGAAAGAAAATATTCAACATAAGAGAATCAACTATGAGCAAAGTAAAGCAATCGCGAGTGTACAAGATAAAAGGATTAATAGTAATGTCCAAGATAAAAGAACAAAAATTCAAAAAAATGATGACTCTCCTAAGGAACAACGAAAAAGCTTAAAATTTACTTGCAAAGTGTGTTTGAAACAATTTACTTATCAAAAATCTTTTATCACACACGCTAAAAGTCATCCAGAGTATAAACTGGAAGAATTGGATGATTCGTCTCAATGTTGGGTAAAAGAAAGATGTACAGAAACCGTGGTGGAAGAAGAAGAAAATGAAGAAGAGGAAGACGAAGAAGACGAGGAAGATGAAAACCTTCCTGCTGAAAGTTTACAATGCACTCAGTGTGGGAAATTATTTGCAACAAAAAGAAATCTTAAAAGGCATGTCTCCACACATAGTGGATTAAAATATACGTGTGAAACATGTGGCAAAGGATTCTCAAGAGTGGATAAATTAAAAGATCATGAACAATCAAAGCACAAGGCTGAATTATTCGGCAATTCTGATTTGGATGATAAAGAGGACACAGACAATGTAGTTAATAAAGGTGACTGTTTAGAAGGAAGAAAGAAAGATCGTCACAATAGACCCCACAAATGTGCAATCTGCCCTAAATCGTTCGCGCAAGCGCAATCGCTAGCGAATCACATAGAACGCCATAAGCGGGTAAAAGAAACTCAAAAAAGATTTCTTTGCGAAGTCTGTAGCAAGTGTTTTGCACAGAGTGGTTCTCTGGTTGCGCACATGCGTACACATACAGGAGTTAAGCCGTACGTTTGTAACGTGTGTAGTAGAGCATTTACAAAGAGCACTTATCTACAATTACATCTACGTACTCATAGCGGTGAAAAACCTTATATTTGCCAGTATTGTAGCAGGGCGTTTGCACGTGCTAACACATTAGCACGACACATAACAATGCATACAGGGGAAGCAAAATATCATTGTCAGATTTGTACAAAATCATTTAGAAGACTGACTTCGTTGAATGAACATACTTATACGCACACTGGACAGAGACCATACGCTTGCAAAATTTGTACAAAGAGATATAACAATGCAGGGTCACTTTACGCGCATAGAAAGAAGTGCAAGGCGCAGCAATTATCTAACCCTGGATTCGCGGTTTCCGTGGAAACCAGTACTGTATCAGAACAACAAGAAGTAGACGTTCCACAAGTTTTAATCTATTCCCACAGGAAATTAGTAGAGGACGCAACTGTTGGACAAGTCACGCCCACACCACAGTACATGCTCGCAAATGTACATAATCAGAAGAATTTGGGATCAAATATTATACAACCGTTTCCAGTGGATGATTCAAACGTTTATACAATTAATACGAAGCAATTTAAGAATCCCTATTATACAATTTATCCAAACATGTAA
Protein Sequence: MALDANEKSYILDARNNYEDGGSLGSEESYDDMRQLVGEKNEESGKFSSLPLASFNFINSIIGSGVIGIPYALHQAGFGLGIVLLILVAGLTDYSLILMIRSGNICGEMSYQGLMRASFGRTGFYILTTLQFIYPFIAMVSYNVVVGDTVTKVLIRVTGMSETSIFAHRQVVVLFATVCITIPLCLYRNVARLAKISFLSLVCVGFILLAILIRMGTMSAIVPSQEDSWRFANFPGIIPSVGIMAFAFMCHHNTFLIYESIERATQQKWDIVTHWSLFTSFVIATAFGIIGYATFTAYVQGDLMENYCWDDDLMNFARIMFSGTILLTFPIECFVTREVILTAIKGTDELEDHTAYVPNSDRKYLIITLSIVVVAYLISMSTDCLGVVLELNGILAAVPLAYVLPGLCYLKLEDGPILSSKKLPALGLMSAGVFAAVSGLLLLILNNDTSSSCVHGQIAEGDGLPPVICVPCNQRLDASYDFKCQIQNSDEKLRQILKLKSSSNDSVTNASSIVTAIIADVISSVISSEKENTEKQEVCSTNFCNDNFCFTKDETAFCLNSEKNLFCYEKESSHSRLNDTEQRKSLENVNVYKSLLEDDSVRQIDSIKQEFVLLDEHMVQTKDVPLKGEASIEESQQMSEETSKTDSIQDDDDDEKPLISRTTRLRCTQCIKSFHTKVALQRHAIVHKRKTKLRYVCYVCDKQYSTLAKVKNHVAICHEARDRKENIQHKRINYEQSKAIASVQDKRINSNVQDKRTKIQKNDDSPKEQRKSLKFTCKVCLKQFTYQKSFITHAKSHPEYKLEELDDSSQCWVKERCTETVVEEEENEEEEDEEDEEDENLPAESLQCTQCGKLFATKRNLKRHVSTHSGLKYTCETCGKGFSRVDKLKDHEQSKHKAELFGNSDLDDKEDTDNVVNKGDCLEGRKKDRHNRPHKCAICPKSFAQAQSLANHIERHKRVKETQKRFLCEVCSKCFAQSGSLVAHMRTHTGVKPYVCNVCSRAFTKSTYLQLHLRTHSGEKPYICQYCSRAFARANTLARHITMHTGEAKYHCQICTKSFRRLTSLNEHTYTHTGQRPYACKICTKRYNNAGSLYAHRKKCKAQQLSNPGFAVSVETSTVSEQQEVDVPQVLIYSHRKLVEDATVGQVTPTPQYMLANVHNQKNLGSNIIQPFPVDDSNVYTINTKQFKNPYYTIYPNM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00141354;
90% Identity: iTF_00233379;
80% Identity: -