Bpas012899.1
Basic Information
- Insect
- Bombus pascuorum
- Gene Symbol
- SNAPC4
- Assembly
- GCA_905332965.1
- Location
- HG995275.1:16119732-16124173[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6.6e-12 8.3e-09 35.7 2.1 1 45 12 58 12 59 0.96 2 4 8.5e-08 0.00011 22.6 0.5 4 42 68 110 66 114 0.97 3 4 1.9e-13 2.4e-10 40.7 0.0 1 45 120 165 120 166 0.97 4 4 4.3e-10 5.5e-07 29.9 0.1 3 42 175 214 174 217 0.97
Sequence Information
- Coding Sequence
- ATGTGGAATGTTTTTCTTCACCCTAACATCAACAGGAAGCATTGGACAAAGTCAGAAATTACTAAACTCAAGAGAATAGTAAAAAAGAATAAATTTCAAAACTGGGACAAAATTGCTGAAGAATTGAATACAAATCGTAGCGCATATCAATGTCTTATCAGATATAATACAAGAAAAAGATTACCTAAAGTCCATTGCATTTGGGAAAATGAAGAAGATAAAAGACTTTTGAAACTAGTAGAAATATTTCAAATTGGTGACTTTATTCCTTGGGGCAATGTAACTAGTTGGATGCAAAATAGAACTAAGCAGCAAGTTTATTTTCGATGGTCATACAGCTTATCACCATATTTAACTAAAGGCAGATTTACTAAAACTGAGGACGATATCTTGAAAGATGCTGTTACTAAATATGGTACTAACTTTCGTAAAATATCAGCTGCATTAATGCCTAATAGATCTACCATTCAACTACATGATCGTTATCAAACGTTAACCATTAACCAAATTGAAAGTTGGACTTCGTGGACGCTTGAAGAAGATACAAAGTTACTTCATTTTTTTGAGTGCATTGGTCCAAATTGGTCTGTAATAGCTAAAAACTTTTCGTGCAAAACTAGGACTCAATTAAGACATAGATACACAGCTTTGCAAAAATATATTAAGAGAGGTGTTTCTATACTTGAACTGCATAAATATCAATTACACAATGGAGTACAACGTTCAGAAAATGAAAACAAGGAACAAAGAAAAGAATTTTGTAAAAATATCTTCAAACCTAATAATAGTATTATCAATGAAGATCATGATAATAATATTACGAATATAGATCAAGAGTTAATTGACTATTTTCGTAAAAAATATAAAGCAGAACAATTGATACATAGGCGGGAACTTCATAACGTGGAAAAGTTGGAATGTAATACAATAAGCTTGTATAATATTTTACAAGCATTGAATGCCAAACTTTGTATATCCAACAACATTATTGATAAAAAATTAAACAATAGAGATCAACAGCTTTTGCATTCATTAAGGGAATATATAAAACTAAAAAGCGATAAGAAAAAGTACTTTCAAATTGTAGAGGAGTACAAATCACGCATGTTTAAACGCAATGAGTCTGAACAAGATTCTTGTTTTTTACCTCCATGTCCTTTTGATTCGCAAATAAAATTGAAGAAATTAAAGAAATGTATCGATTATGATATAGATAGAAGCAATAAATTTGTATTCGAACTACCTACAGACTTTAATACATCAGAGCTTATAGCTTCTTACATCGGTGGTGATGAACAAGAATTACAATTTCAAAAATTTGCTCATTCCTTTCAAGTTAATAATTCAAAATGCAGTGAATCAGCCTTTGAAGCTCAAAACTGTTCTACATTTTTAACAAAATTATTATTACAACATCGATGTCGTACCAATAATAGCAACGATAGAAACAATTCAACTGACAAAACATTAAAAAAATTGGAATCAGTCGTTCGTTTTGACATTGACACCGCTGCATCTCATGAAAATGACGATGGTTACAAATCTCAGCATGTGGAATTTCAAAGCAAATGTCTATCTAACTGTACCACAGAAATTACTCAAAACCATGATACATCTATTATGTATGCTAGCCATGCAACTTTGATAAGTTTCAAAAACTTGACATATTTGAAACGATTAAATGAAAAGTATAGTATTCTTGATGAATATTTTATACCATCAAACGAATTACAAGAAGCATTTAATTTATTGGAAACACGTTTAGAACAATTATTTAAGTACCCATTAGGTCTGTCAAATATCTTATTGCCACAAGTTTATGTAGAGGATACATTTTTGTTCGAAGATATTCCACCAAAAAAGAGACGTCTCAAATATTAG
- Protein Sequence
- MWNVFLHPNINRKHWTKSEITKLKRIVKKNKFQNWDKIAEELNTNRSAYQCLIRYNTRKRLPKVHCIWENEEDKRLLKLVEIFQIGDFIPWGNVTSWMQNRTKQQVYFRWSYSLSPYLTKGRFTKTEDDILKDAVTKYGTNFRKISAALMPNRSTIQLHDRYQTLTINQIESWTSWTLEEDTKLLHFFECIGPNWSVIAKNFSCKTRTQLRHRYTALQKYIKRGVSILELHKYQLHNGVQRSENENKEQRKEFCKNIFKPNNSIINEDHDNNITNIDQELIDYFRKKYKAEQLIHRRELHNVEKLECNTISLYNILQALNAKLCISNNIIDKKLNNRDQQLLHSLREYIKLKSDKKKYFQIVEEYKSRMFKRNESEQDSCFLPPCPFDSQIKLKKLKKCIDYDIDRSNKFVFELPTDFNTSELIASYIGGDEQELQFQKFAHSFQVNNSKCSESAFEAQNCSTFLTKLLLQHRCRTNNSNDRNNSTDKTLKKLESVVRFDIDTAASHENDDGYKSQHVEFQSKCLSNCTTEITQNHDTSIMYASHATLISFKNLTYLKRLNEKYSILDEYFIPSNELQEAFNLLETRLEQLFKYPLGLSNILLPQVYVEDTFLFEDIPPKKRRLKY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -