Bopu003360.1
Basic Information
- Insect
- Bombus opulentus
- Gene Symbol
- SNAPC4
- Assembly
- GCA_034509555.1
- Location
- CM067411.1:1382224-1384815[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.072 57 4.1 0.1 3 18 168 183 166 185 0.93 2 5 2e-11 1.6e-08 34.6 2.1 1 45 248 294 248 295 0.96 3 5 1.8e-07 0.00014 22.0 0.5 4 42 304 346 302 350 0.97 4 5 5.3e-13 4.2e-10 39.7 0.0 1 45 356 401 356 402 0.97 5 5 8.9e-10 7e-07 29.4 0.1 3 42 411 450 410 453 0.97
Sequence Information
- Coding Sequence
- ATGAACACGATACTCAACGAAGGTGATGAAAATAATGATCTAGTCGAGATGTTGTTAGAAAGTATATTTCCCAAATGTAAAGATGGAAATCATTTTGagaataattacgaaataaataatattgaattaatcGATAACTTAAAACAAGAATCTATTAAAGATCGAATAAGTGTACAAAAAGAATGCCAAACCAAAGATGACTTTACGGAATGTAGTATCGAAAATTGCTATGATATGTTAGATTATAACAAACagataatttcttctttaatggATTTAAAAAGCAACATAATGCTAGCTCTTacaaaatgtcaaaaaaaaTTAGCAGTGatagaatgtaatttaaaaaaaaatatagctaaagatacaaaaatttcaatttgcaatGCCGGTATGCCTTATTTtaaggataaaaattatttttttgcttCCAATAACgaagatgaaatattgaaGGAAAGCTATAAAGAATTACAGCTCAAAAATCTTCCCAAAATTTCTGCATggactaaaaaggaaagagatgTGCTTTTAGATGCGGTAAAAGAAGAAGCTGAAGGGAGAAAGGAATGCAAAGatgggaaaaagaaattttcatctaCAGACATTTTACAAACAGTCAAGCCATTAcaacaaaaagaatttgattggtttaaaatatcatctaattattttgaagATGTCCATTCTCCGTTTGATTGTCGTATCATGTGGAATGTTTTTCTTCACCCTAACATCAACAGGAAGCATTGGACAAAGTCAGAAATTACTAAACTCAGGAGAatagtaaaaaagaataaatttcaaaactgGGACAAAATTGCTGAAGAATTGAATACAAATCGTAGCGCGTATCAATGTCTTATCAGATATAATACAAGAAAAAGATTACCTAAAGTCCATTGCATTTgggaaaatgaagaagataaaagactTTTGAAACtagtagaaatatttcaaattggTGACTTTATTCCTTGGGGCAATGTAACTAGTTGGATGCAAAATAGAACTAAGCAGCAAGTTTATTTTCGATGGTCATACAGCTTATCACCATATTTAACTAAAGGCAGATTTACTAAAACTGAGGACAATATCTTGAAAGATGCTGTTACTAAATATGGTACTAACTTTCGTAAAATATCAGCTGCATTAATGCCTAATAGATCTACCATTCAACTTCATGATCGTTATCAAACGTTAACCATTAACCAAATTGAAAGTTGGACTTCGTGGACGCTTGAAGAAGATACAAAGTTACTTCATTTTTTTGAGTGCATTGGTCCAAATTGGTCTGTAATAGCTAAAAACTTTTCGTGCAAAACTAGGACTCAATTAAGACATAGATACACAgctttgcaaaaatatattaagagaggtgtttctatatttgaactgcataaatatcaattacacAATGGAGTACAACGttcagaaaatgaaaacaaggaacaaagaaaaaaagaattttgtaaaaatatcttcaaacCTAATAATAGTATTATCAATGAAGAtcatgataataatattacgaatatagaTCAAGAGTTAATTGActattttcgtaaaaaatataaagcagAACAATTGATACATAGGCGGGAACTTCATAACGTGGAAAAGTTGGAATGTAATACAATAAgcttgtataatattttacaagcaTTGAATGCCAAACTTTGTATATCCAACAacattattgataaaaaattaaacaatagaGATCAACAGCTTTTGCATTCATTAAgggaatatataaaactaaaaagcGATAAGAAAAAGTACTTTCAAATTGTAGAGGAGTACAAATCACGCATGTTTAAACGCAATGAGTCTGAACAAGATTCTTGTTTTTTACCTCCATGTCCTTTTGATtcgcaaataaaattgaagaaattaaagaaatgtatCGATTATGATATAGATAGAAgcaataaatttgtattcgaACTACCTACAGACTTTAATACATCAGAGCTTATAGTTTCTTACATCGGTGGTGATGAACaagaattacaatttcaaaaatttgctCATTCCTTTCAagttaataattcaaaatgcAGTGAATCAGCCTTTGAAGCTCAAAACtgttctacatttttaacaaaattattattacaacaTCGATGTCGTGCCAATAATAGCAACGATAGAAACAATTCAACTgacaaaacattaaaaaaattggaatcAGTCGTTAGTTTCGACATTGGCACTGCTGCATCTCATGAAAATGACGATGGTTACAAATCTCAGCATGTGGAATTTCAAAGCAAATGTCTATCTAACTGTACCACAGAAATTACTCAAAACCATGATACATCTATTATGTATGCTAGCCATGCAACTTTGATAAGTTTCAAAAACTTGACATATTTGAAAcgattaaatgaaaagtataGTATTcttgatgaatattttataccatCAAACGAATTACAAGaagcatttaatttattggaaacacgtttagaacaattatttaagtacCCATTAGGTCTGTCAAATATCTTATTGCCACAAGTTTATGTAGAGGATACATCTTTGTTCGAAGATATTCCACCGAAAAAGAGACGTCTCAAATATTAG
- Protein Sequence
- MNTILNEGDENNDLVEMLLESIFPKCKDGNHFENNYEINNIELIDNLKQESIKDRISVQKECQTKDDFTECSIENCYDMLDYNKQIISSLMDLKSNIMLALTKCQKKLAVIECNLKKNIAKDTKISICNAGMPYFKDKNYFFASNNEDEILKESYKELQLKNLPKISAWTKKERDVLLDAVKEEAEGRKECKDGKKKFSSTDILQTVKPLQQKEFDWFKISSNYFEDVHSPFDCRIMWNVFLHPNINRKHWTKSEITKLRRIVKKNKFQNWDKIAEELNTNRSAYQCLIRYNTRKRLPKVHCIWENEEDKRLLKLVEIFQIGDFIPWGNVTSWMQNRTKQQVYFRWSYSLSPYLTKGRFTKTEDNILKDAVTKYGTNFRKISAALMPNRSTIQLHDRYQTLTINQIESWTSWTLEEDTKLLHFFECIGPNWSVIAKNFSCKTRTQLRHRYTALQKYIKRGVSIFELHKYQLHNGVQRSENENKEQRKKEFCKNIFKPNNSIINEDHDNNITNIDQELIDYFRKKYKAEQLIHRRELHNVEKLECNTISLYNILQALNAKLCISNNIIDKKLNNRDQQLLHSLREYIKLKSDKKKYFQIVEEYKSRMFKRNESEQDSCFLPPCPFDSQIKLKKLKKCIDYDIDRSNKFVFELPTDFNTSELIVSYIGGDEQELQFQKFAHSFQVNNSKCSESAFEAQNCSTFLTKLLLQHRCRANNSNDRNNSTDKTLKKLESVVSFDIGTAASHENDDGYKSQHVEFQSKCLSNCTTEITQNHDTSIMYASHATLISFKNLTYLKRLNEKYSILDEYFIPSNELQEAFNLLETRLEQLFKYPLGLSNILLPQVYVEDTSLFEDIPPKKRRLKY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00219036;
- 90% Identity
- iTF_00219720;
- 80% Identity
- -