Bopu003359.1
Basic Information
- Insect
- Bombus opulentus
- Gene Symbol
- SNAPC4
- Assembly
- GCA_034509555.1
- Location
- CM067411.1:1382224-1384815[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 7.1 5.6e+03 -2.3 0.0 22 42 58 80 49 83 0.69 2 5 8.4e-12 6.6e-09 35.9 2.1 1 45 90 136 90 137 0.96 3 5 7.3e-08 5.7e-05 23.3 0.5 4 42 146 188 144 192 0.97 4 5 2.2e-13 1.7e-10 40.9 0.0 1 45 198 243 198 244 0.97 5 5 3.7e-10 2.9e-07 30.6 0.1 3 42 253 292 252 295 0.97
Sequence Information
- Coding Sequence
- ATGAACACGATACTCAACGAAGGTGATGAAAATAATGATCTAGTCGAGATGTTGTTAGAAAATGCGGTAAAAGAAGAAGCTGAAGGGAGAAAGGAATGCAAAGatgggaaaaagaaattttcatctaCAGACATTTTACAAACAGTCAAGCCATTAcaacaaaaagaatttgattggtttaaaatatcatctaattattttgaagATGTCCATTCTCCGTTTGATTGTCGTATCATGTGGAATGTTTTTCTTCACCCTAACATCAACAGGAAGCATTGGACAAAGTCAGAAATTACTAAACTCAGGAGAatagtaaaaaagaataaatttcaaaactgGGACAAAATTGCTGAAGAATTGAATACAAATCGTAGCGCGTATCAATGTCTTATCAGATATAATACAAGAAAAAGATTACCTAAAGTCCATTGCATTTgggaaaatgaagaagataaaagactTTTGAAACtagtagaaatatttcaaattggTGACTTTATTCCTTGGGGCAATGTAACTAGTTGGATGCAAAATAGAACTAAGCAGCAAGTTTATTTTCGATGGTCATACAGCTTATCACCATATTTAACTAAAGGCAGATTTACTAAAACTGAGGACAATATCTTGAAAGATGCTGTTACTAAATATGGTACTAACTTTCGTAAAATATCAGCTGCATTAATGCCTAATAGATCTACCATTCAACTTCATGATCGTTATCAAACGTTAACCATTAACCAAATTGAAAGTTGGACTTCGTGGACGCTTGAAGAAGATACAAAGTTACTTCATTTTTTTGAGTGCATTGGTCCAAATTGGTCTGTAATAGCTAAAAACTTTTCGTGCAAAACTAGGACTCAATTAAGACATAGATACACAgctttgcaaaaatatattaagagagTCGTTAGTTTCGACATTGGCACTGCTGCATCTCATGAAAATGACGATGGTTACAAATCTCAGCATGTGGAATTTCAAAGCAAATGTCTATCTAACTGTACCACAGAAATTACTCAAAACCATGATACATCTATTATGTATGCTAGCCATGCAACTTTGATAAGTTTCAAAAACTTGACATATTTGAAAcgattaaatgaaaagtataGTATTcttgatgaatattttataccatCAAACGAATTACAAGaagcatttaatttattggaaacacgtttagaacaattatttaagtacCCATTAGGTCTGTCAAATATCTTATTGCCACAAGTTTATGTAGAGGATACATCTTTGTTCGAAGATATTCCACCGAAAAAGAGACGTCTCAAATATTAG
- Protein Sequence
- MNTILNEGDENNDLVEMLLENAVKEEAEGRKECKDGKKKFSSTDILQTVKPLQQKEFDWFKISSNYFEDVHSPFDCRIMWNVFLHPNINRKHWTKSEITKLRRIVKKNKFQNWDKIAEELNTNRSAYQCLIRYNTRKRLPKVHCIWENEEDKRLLKLVEIFQIGDFIPWGNVTSWMQNRTKQQVYFRWSYSLSPYLTKGRFTKTEDNILKDAVTKYGTNFRKISAALMPNRSTIQLHDRYQTLTINQIESWTSWTLEEDTKLLHFFECIGPNWSVIAKNFSCKTRTQLRHRYTALQKYIKRVVSFDIGTAASHENDDGYKSQHVEFQSKCLSNCTTEITQNHDTSIMYASHATLISFKNLTYLKRLNEKYSILDEYFIPSNELQEAFNLLETRLEQLFKYPLGLSNILLPQVYVEDTSLFEDIPPKKRRLKY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -