Bopu004942.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Bombus opulentus
Gene Symbol
Arid4b
Assembly
GCA_034509555.1
Location
CM067412.1:7464168-7470872[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.6e-28 1.9e-24 86.0 0.1 1 89 337 424 337 424 0.95

Sequence Information

Coding Sequence
ATGTCTCGCCTAAAGTACCTTCGAGGTTACAACTATTACCTGATGTCTGAGAAATCGACAGGCTGTCACGAACGTAGTGGACTTCGTTTTGAAAACGGAGACGATCCACCGTACCTATCAGTGGGTACGGAGGTTAGTGCTAAATACAAGGGTGCCTTTTGTGAAGCAAAAATTCGGAAAGTAGTAAGATCAGTGAAATGCAGAGTGACTTATAAACAAGGCTTGGGTACAGCAACAGTAGCTGATGATCAGATAAAAGGGACTTTAAGAGTAGGTGCATCTGTTGAAGCTAAACATGgagatagaaaagaatttgtgGAAGCTACTATCACTAAAATTCAAGATTGTAGTCAATATACTGTAGTTTTTGATGATGGAGATATTACTACATTAAGAAGAACTGCACTTTGTTTGAAAAGTGGAAGACATTTTGCAGAGAGTGAAACTTTGGACCAACTTCCTTTGACACATCCAGAACATTTTGGAAATCCAGTAAttggaggaagaagaggacgGCGGTCTAGACAAGCACAaGATGAAAGTAGTGATGATGAAGATAGTCCTCCACGAGGAACTCGTGATTCCGGTTCTAGTGGAACAGGCAAAGAAGGAATGGAGACAGAACCTGAAATTGGACGAGTTGTATGTGTGGAACTTggagataaaaagaagaaagataattgGTTCCCTGGATTAGTGGTTGCTCCAACTGCTCAAGATACAGTAAGAATTCGAGTGAGAGATGACTACCTTGTGCGATCATTTAAGGATGCACGATATTATACAGTTCCAAAGAAAGAGGCCACTGAATTCACAAAAGAACTTGTCAACAAAGTTGAGAATAGTACATTGAAGGTTGCAGTAGAGAAGGCATTGctatttttagaaaagaatGAGTTACCTCCCCATTGGGATAGAGATTCTCTTTTTGGACATTCTGTATCAAGCGGAAACAGTGACTCAGATGGGGAACTTGATTCTGATagTTCTGACGATGAACCgcgcgaagaaaaagatcaCTTTGTGGCACAACTGTATAAGTTTATGGATGACCGTGGTACACCTATTAACAACTGTCCAATGATAGGTTCTGAGGACATAGATCTATATAGGTTATTTCGAGCTGTCTATAAGTTAGGTGGTTATAATCGTGTGACAAATCAAAATCaatggaaattaataacaCGTCGCTTGAGCTTTACAATGCAAAATTCACCATCGACGCACAATTTGGTTAAACAGGCCTATAAGAAATTCTTACATTCctttgaagatttttatagGAAGTTAGGTTGTACTATGGTAAATCATCCAAGGGGTACTATGCGTAAACAACGTCCTGGAAGAAGTCTGATTAGGGATAAAGACAGAAATACGCCCGTACCACCTCAAGTGTctaatatcaaaaatgaaaaagaggaagaagataaaaagatcatggaagaagaaaagaaagagaaaaaggagacaaaaaaagaacaatcaataaaagaagaagaaattgtgaagataaagaagaaagatgaatTTGAAGAAAGCGGTAGCGGACAAGACAGTGACGTAAACGTTGAAGGTGAAGCTGAATCTTCATCTAGTAGTGAAAAATCTCAAAAAATATCAACATCCTTATCCTTACCAAACAGAGgcaaatctaaaaataaagaagacacaaagaaaaaagtaatagaaaaaaagaaaactgaacctaaaagacaagaaaagaaagacgataaaatgaaagaagaagatgctGCTAAAACAAGATCTAAATCTAAAGATGataatgtaaaaagtaaaatgtcTTCTGAAAATAGGGAAACACGAACTCCATCAAGAGAATCGGAAAGAAAAACTTTATCTAAGCAAAGACGATTGATGGATGAAGATTTAAAGAAACGGGggagaaaacgaaaagagTATGAGGCAGAAAAATCACGTACAGACGAACAGTCAACAGATTCAGCTCCTTGTTACAAAGGACCTGTAGAATTAGGAGATAGACTAAAAGTATATTATGGACCTACTCATGAATCTAAAGTTACTTATGAAGCAAAAGTTATTGATATGGAAAAAGATGGTACAGAACCAATGTATTTAGTGCATTATACTGGATGGAATACGAGATATGATGAATGGATTAAACCATCGAGGATAGCACAGAATTTTACACAAGCTCAAGGTAAAGTAAAACGAATTAAAGCTACTTCACGACCTCAAACTCCCAGTacgaatttatcaaataacatCAATAAGTCatcaaaaattgtttctaacACTAATTCAAATGCATCTCAAAATAGACGTCGAGCGCAAAGTGTTGCACCTACTACATCGGTTGTTTCATCTACTACGACAAGAGAAATCAAGAAAGAagataaggaaaaagaaatatctcaaCCGACTAGATCTACGACTCCATTGTCTGTTATAAGTTCTAGTTCTAGAACCAAAAGTCCAGCAACACCAGCAAACAATCGTCAAACACGAACAAGAAATAATGATACATCTAGCACAGAACATCGAAGGCGTACTAGGAGAACTTCCGGACATGCGGATATAGTTCCATCGGAAACTGAAGAAAGTGAAACATATGATTCAGATACTACAGAATCTGAACAAACAAGAACGAAATCTAAGATTACAGAGGAAAGAAAACGTAGAGAAGCGAGATACAGAGTTGAAGACAGAATAAAACCTGACGAAACTAGCGAGGGTGAAGAAGACAAAGATAATTTAGAAGAACCACGTAGAGGTAGACGTTTAAGAAGAACAATTAGTAAATCGCAAGGTATAAAATCTGAACCAGATAGCGATGAAGAACAACCGAAAGGTCGAGATTTTGACTTAAATCAAATACGATCTGAATTAAAAGGTTTTGATAAAGCAGTGAAATTGGAACTTGTTAGGGTTGAACCAGATCCAgaggatgaaataaaaatagaagaaaaagagaatgttGTTTCAGTATCAccaaaattggaaaaaaaattagagccatcaaaattagaaacaatGCCTGAATCTAAAATAGTAGATAGTACAGAagatatatatgaatttaaagaaCCAGAACCATTTGAATTTGAGGTACGAAATAAACGAGATACAAGTGGAGAAAAAGACAAGATAAAAAAGAGGGTGTTTGAAGAAGAACCGAAAAGCcctaaaaagaaacaaaaaatagttGTATCACCAGttataaaagaaactaaatcAGAAACCGACAACGATTCacgaaaaaaagtaaagaaattattcagtAAAAGGACTGATGATATTACAGACAATTTATCTTCTCACAAATCACTACAATCTACATCATTAGCAACATGTGAAGAAGCATTCGATAAGCTTTGTGAATCACCTTCATTTAATTCGGCGAAACCAATACCTATTATTGAGGAAacgagtaaaataaataatggtatagATCTTTTATTTAGTGATTTACCTGGAGATGATGATGCTACTCATGACGACTCAGAAGATCGTTTAATAATATCAGAGGCGGAAGTTTCAGAAGCAGAACAAGAAAACTTATTTACATATCAGCAAGAAATGTTTCCTTCTAATGATGGAAATGATTCAATGGAATCCAATAAAGAAGACACAAGTTTACAAATTGAATCGGTAAGAGAGGATATAACATTAACAGTTTCAAATAAACCTGATATAGCTGTTGAACAGAAACAAAGCATTAAATCTCCTTTACATTGTCAATCTCCAGAATTAAAACCATTAGATCCAAAGTTATTAGATATTACACCTGTTTCATCTTCAATTGTAACAATTCCAGCACCAATTAGTGCAAGATTACCAGCTACATCTACAATCGAAGAAAAACTTTCAGCTGCAATGGGTTTTCGTAATAAAACTAAAgatgttaaaaaagaagatgaaattcCAGAAGTTGTATGGAAACCctcaaaagaaatttctaagaaGTTAGATATTGTAGTTGCacaaaaaagtaaagaagatCAGCATGGGCCTAAGACTGAAAGTGAGaataagaaacgagaagaggaagagattgtaataaataatgaaaaccaatgtaaagaaataatgtgtgtagtaattaaacaaaaagaagaagaacttCAACaatttaaacttaaaaaagaagtagaaataaaaaaattcgttgaaaCAAAAACAGAACATAAAAAGATACCTGAAactgaagaagaagaatggaaACATATAGAAAATGAGAAGTCTAAGAAAACAGAAGATGAATTTAAAGAACacgattttaaagaaaaggaaaaggaaaatcaTAAGAAGATAATCAGCCAAGATATGGTAGATTCTGCAGATAGTAGTGATTCTGAACAGAggttaataatcgataatgaGGAATCACAAGATGTGAAAAGTTCGTCAAATTTTGATGTTAAATTAAGAGCAGAGTTAGATAGGCTTCAAGACACACAAGAAAGGTTCCCACTATTACAATCGCAAAAATCTATGCAACCATTAAAACATCAGCCACAAGAATGTATTGCTGAATTTAAAGCAGAGATCAAAGAAACACCTGTCATAAAAACAGATGAGGAGGGAGAGGCAATTAATTCTTTGTTATGTGAGGAAGAAATACCAGGTTCACCAGCACCTATTActgaaaatatagaacaaataAATGCTGGTCCATCCTGTTCACCTCCAAAAGTTGAAACTACAGAAAATAGTATAGTATTAATGGAAATGCCATTTGCAAGTGCTCCTACATCTGGTCAGAGTACAACCAGCAGCACTGTTGCCACTCTGAGTATGGCACTGCCAAAAACTGTAGAAACATCTGTCCCAGTTTCTTTATCTATACAACAAAATCCTACTCTGGGTATGAGACAACAGCAGTCTCATCATCAACACTTACCTGCACTAATGCCTGCACAGAGGAGAGAAAGCAATGAAGCAGCACCTGTAATGGATAATACACCTCCAACTACACCTGATTCAAGCATTTCCAATATCTCTGGATCCCCAAGAGAAGAAAGGACAGGTGGTTCATCACCAACTTCAGAGgataatatgaaacataatCGTGATAGTTCTGAAGCAGACAATGACAGTGGTGGGAAAGGTCCAGGATTCAGTGAAGATGACACATTGCCAAATGTTGAAGGAAATTCTGCagatagaatattaaaacCACCAGCAAAGCGATCCATTGAAGAAACACAATCGCCTAAAAAACGTAAAAGGAGTAGGAAGCACTCAGAATGTGATAAAAATACTACTAAAAAAGCGGGAAGACATGGTAATAGACATGGTAGACATGGTGGCGGAAGCGATAGCGATGACACAAGTGAAGGTTCTAATTTATGTGGAATTAATACAACTTCAACAAATCACACGAATATCACTAGTGTTCCTGATCTTAGTAATTACTCATCGAGATCACCTCGACcgacgaaatataatttttatgtggAATTAGATCCTGAATTGGATGGCAGTCAAAGGATAGCTGTACTACAGCAAAAATTAGCTGAGTTACGTAAAACATATAATGCTGTGAAAGTTGAACTTGCTGCTATTGAAAGACgcagaaaaaaattaagaagaagagaacgagaagCTATAAAGGCAGCTAAAGCAGAAATGCAACAGGCCTGTTCGTGA
Protein Sequence
MSRLKYLRGYNYYLMSEKSTGCHERSGLRFENGDDPPYLSVGTEVSAKYKGAFCEAKIRKVVRSVKCRVTYKQGLGTATVADDQIKGTLRVGASVEAKHGDRKEFVEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFAESETLDQLPLTHPEHFGNPVIGGRRGRRSRQAQDESSDDEDSPPRGTRDSGSSGTGKEGMETEPEIGRVVCVELGDKKKKDNWFPGLVVAPTAQDTVRIRVRDDYLVRSFKDARYYTVPKKEATEFTKELVNKVENSTLKVAVEKALLFLEKNELPPHWDRDSLFGHSVSSGNSDSDGELDSDSSDDEPREEKDHFVAQLYKFMDDRGTPINNCPMIGSEDIDLYRLFRAVYKLGGYNRVTNQNQWKLITRRLSFTMQNSPSTHNLVKQAYKKFLHSFEDFYRKLGCTMVNHPRGTMRKQRPGRSLIRDKDRNTPVPPQVSNIKNEKEEEDKKIMEEEKKEKKETKKEQSIKEEEIVKIKKKDEFEESGSGQDSDVNVEGEAESSSSSEKSQKISTSLSLPNRGKSKNKEDTKKKVIEKKKTEPKRQEKKDDKMKEEDAAKTRSKSKDDNVKSKMSSENRETRTPSRESERKTLSKQRRLMDEDLKKRGRKRKEYEAEKSRTDEQSTDSAPCYKGPVELGDRLKVYYGPTHESKVTYEAKVIDMEKDGTEPMYLVHYTGWNTRYDEWIKPSRIAQNFTQAQGKVKRIKATSRPQTPSTNLSNNINKSSKIVSNTNSNASQNRRRAQSVAPTTSVVSSTTTREIKKEDKEKEISQPTRSTTPLSVISSSSRTKSPATPANNRQTRTRNNDTSSTEHRRRTRRTSGHADIVPSETEESETYDSDTTESEQTRTKSKITEERKRREARYRVEDRIKPDETSEGEEDKDNLEEPRRGRRLRRTISKSQGIKSEPDSDEEQPKGRDFDLNQIRSELKGFDKAVKLELVRVEPDPEDEIKIEEKENVVSVSPKLEKKLEPSKLETMPESKIVDSTEDIYEFKEPEPFEFEVRNKRDTSGEKDKIKKRVFEEEPKSPKKKQKIVVSPVIKETKSETDNDSRKKVKKLFSKRTDDITDNLSSHKSLQSTSLATCEEAFDKLCESPSFNSAKPIPIIEETSKINNGIDLLFSDLPGDDDATHDDSEDRLIISEAEVSEAEQENLFTYQQEMFPSNDGNDSMESNKEDTSLQIESVREDITLTVSNKPDIAVEQKQSIKSPLHCQSPELKPLDPKLLDITPVSSSIVTIPAPISARLPATSTIEEKLSAAMGFRNKTKDVKKEDEIPEVVWKPSKEISKKLDIVVAQKSKEDQHGPKTESENKKREEEEIVINNENQCKEIMCVVIKQKEEELQQFKLKKEVEIKKFVETKTEHKKIPETEEEEWKHIENEKSKKTEDEFKEHDFKEKEKENHKKIISQDMVDSADSSDSEQRLIIDNEESQDVKSSSNFDVKLRAELDRLQDTQERFPLLQSQKSMQPLKHQPQECIAEFKAEIKETPVIKTDEEGEAINSLLCEEEIPGSPAPITENIEQINAGPSCSPPKVETTENSIVLMEMPFASAPTSGQSTTSSTVATLSMALPKTVETSVPVSLSIQQNPTLGMRQQQSHHQHLPALMPAQRRESNEAAPVMDNTPPTTPDSSISNISGSPREERTGGSSPTSEDNMKHNRDSSEADNDSGGKGPGFSEDDTLPNVEGNSADRILKPPAKRSIEETQSPKKRKRSRKHSECDKNTTKKAGRHGNRHGRHGGGSDSDDTSEGSNLCGINTTSTNHTNITSVPDLSNYSSRSPRPTKYNFYVELDPELDGSQRIAVLQQKLAELRKTYNAVKVELAAIERRRKKLRRREREAIKAAKAEMQQACS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00863745;
90% Identity
iTF_01539387;
80% Identity
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