Blap014607.1
Basic Information
- Insect
- Bombus lapidarius
- Gene Symbol
- Kdm5c_1
- Assembly
- GCA_936014575.1
- Location
- CAKXZU010000109.1:381515-386159[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-18 3.1e-15 56.2 0.0 30 89 9 65 4 65 0.94
Sequence Information
- Coding Sequence
- ATGAACAATCTTACCCCGCGAGGGGCTCTTGATTTATATTCTTTACATAAAATAGTTACCAATGAAGGAGGAATTGACACAGTTACGAAGGAAAGGAGATGGGCAAGAATTGCAAATAAATTAGGTTATCCTCCTGGTCGTAGCGTTGGAAGTATTCTAAAAAATCACTATGAACGTATTTTGTATCCATTTGATGTGTTTAAACAAGGAAAGACATTGGCAGATATTAAAATTGAGCCAGATTCTAATGTAAATGAGAAAAAAGATAGAGATTATAAACCACATGGAATTATTACAACAATTAAACCCCCATCTGAGAAATTTTCCCGCCGTTCTAAGAGATTTAGTGGTCAAGAAGAGAAGCAGGAAGTATCTATTAAACAAGAGGATTGTAAGGAGGAATGTGATTCTGACAATGATTGTAAAGATGGAATTAGAAATAAACAATATGATGATAAAGATAATAGTAATGGACCTGGCCCAAAAATGGCTGGATTTAATACCAAAGAAGGAAAAAAATCAAACAAAACTAGAGGTGTAAAACTTATTTATGAAGTTGATCCATTGGCAAAGTATATTTGTCACATGTTCTTATGCTCTGTTGCTGTATCACGCAAACGAAGAGAAATACATTCTGTTATAACGCTGGACGTATATCTGGCGGGTCTATTCGCGTAA
- Protein Sequence
- MNNLTPRGALDLYSLHKIVTNEGGIDTVTKERRWARIANKLGYPPGRSVGSILKNHYERILYPFDVFKQGKTLADIKIEPDSNVNEKKDRDYKPHGIITTIKPPSEKFSRRSKRFSGQEEKQEVSIKQEDCKEECDSDNDCKDGIRNKQYDDKDNSNGPGPKMAGFNTKEGKKSNKTRGVKLIYEVDPLAKYICHMFLCSVAVSRKRREIHSVITLDVYLAGLFA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -