Bimp009754.1
Basic Information
- Insect
- Bombus impatiens
- Gene Symbol
- DZIP1L
- Assembly
- GCA_000188095.4
- Location
- NT:176588-184549[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 6.5e-05 0.004 16.7 0.6 1 23 161 184 161 184 0.97 2 8 1.3e-06 8.1e-05 22.1 0.4 1 23 1375 1397 1375 1397 0.99 3 8 0.00014 0.0089 15.6 1.3 1 23 1403 1425 1403 1425 0.96 4 8 3.7e-05 0.0023 17.5 3.4 1 20 1431 1450 1431 1453 0.93 5 8 0.00065 0.04 13.6 5.3 1 23 1459 1481 1459 1481 0.98 6 8 0.00042 0.026 14.2 2.7 1 23 1487 1509 1487 1509 0.99 7 8 8.6e-07 5.4e-05 22.6 0.4 1 23 1515 1537 1515 1537 0.98 8 8 3e-05 0.0019 17.8 3.9 1 23 1552 1574 1552 1574 0.98
Sequence Information
- Coding Sequence
- ATGgcattttcatttcgtattgGCACCAAATGGTGTCATGATTTTCCAAAATTGGCAAAAGAATCtggattttatttcaatatgcATAGATCCAGAACACGTGTAGATTGGAATCGTATAAGTAACATAGATATAGATCGAAttataagagaaagagatttcCATTCCATtgatgataatataaataatgtaatagaTTATTGTTTAGAAAGTGAATACGATGTTAAAATCTTAGATCCCAACTTTGTAAAACTCTTTTGTCTTGCACAGTTAGcagttgaatatttattatattgtaaacaatatttaGATCATAGTGTAATTATACTAAAAGATGAACTAAGatcaaaaattgaagaaaatgttaaattgaaaaaagaaataactgCTTTAGAAGAAGTAGTGAAACATATGAAAGAGAAAGtaaaggaaaaaagtaaattaatagaaactaAAATTGGAGATACTAATGGCGAAATttacaaatGTCCACATTGTCcaaaatcttttatatctCCTATGTTTGTAAGTGCACATATTATTCGTCGTCATGCTTATGCATCAGAGTTATACATGCCTACTTCTCCCATACATGAGCACTATCGCAGTGAAACTGAGAAGTTgcataatgaaataaagaatttaaaagaaagattaaatgaaacagaaaaggTGATAAGGAATGAGTCTGAAAGGATTtcagaggaaaaaatattaagttataaTAGAAGGCAAGCTGagagtgaaaatgaaaattttagatacAATAGTAACAAATCTAAAGAACATTCAGAGTATAAAGAATatcaagaagaaataaaaaatttgaagaccATGCTTTTTGATgaaatacatAATTTAAGGCAAAAGGAAAAAACCATGCATGAACACACATCTGAAACAAACGTCCAAACATTCATAAATCAGCaagagaaagaatttcaaaagcTAAAGAATCAATTACTTGACAAGCTTACTCCAGACATAGAAAGTATGCATACAAAATTACAAGCTCaggaaaattattggaaatcaAAAATAGAACATTTGGAGAATCAACATCAAAAAGATGTCGAGAGTCTTATCgcagaattaaaattaacacaAAGTGCAGCTGATGATATGAAAGCCAAGTATGAAACAAAAGTTAACGATTTAGAACGCCAAACTGCGAATCAGTTGGATATCTTATTGGAACAAAgcaaacaattacaatctCTATCACaggaaataaatgtttcacaattgaatgaaaaaaataaagattttgaaaataattcactGAGAAGACGTAGTCCACCTATAATATTAGACAaacttaatgaaattttaaaagcatCAGATGAAACTAATTCAAAACAAAATGGCACAAATACAAAAACTGAGCAAATTGCTGTTGGAAATAGTGTGATAGACACTACAATAAGTTCAAGTTTATCAAGTAAAGTGCTTCCATTAACAGTAGAAAATACTCATTTaaagaaagtttcgaattCCAGAAATAAATCCACTATTCATGAAAATAGGAGAAATATTAAGcaaaaagatataagaaatagaaataatacaatatttaatcctGTGAAAACTATTGAAAAGGATTTAGAGTATTACAGTTCAAGTAATATTTCAGACACAGAAATTTCAGTGcctgaaaaaggaaataattatgaacACACAAAATATAATCgcgtaattataaaaagtgaCGAACTTGGCATAAGTAAGCCAcaggatatttttaataaaagcatATCTGATGAGTTTTTATCTAACagtaaaaatacgaaaacatCAAAATCCTTAGAGGACAATGTATCATCATCAAATTCAGAATCATTTGTTTCTGACTCAAGCACAGAAAATGTTACTGCAATTCACAATAACTCCCCATTTCATGAACATAAAACACATTTACCTAAAAAAATAACAGGACATAgttcattttataaaagattacaAACTAGTTTAATGGAAACTTTTGAACAGAAATTAAGAGATTTAGGAGTAGATCCGGAATGGCAAGGAATACCAAAAGCAACATTCAAACAGAAAATGGACATTTTAAAGCATCATCACAAATTAACTGCAAAAAAGACTCCAAAATATCATCAGATTAAATTAAGGATAATTGAAGAagttcttaataaaatatctaagaagaaaaaggttactgaaaatgtgaaacaatttaaaaactcACCTCTACATAAACCAATAATCACTGTTAAATCAATGGTTGCAAAAGACCTTAATCATCAACATGATCCTGggCAAGCAACaacatcaaataaatttcattctatacCAGAAGATAAGGATTTTGCTAGAAATATACTCGAAAATAAATCAGTGCCTACAAAAGctacaaaaattgcaaattacgaaagtatagaaaaattattacaattttctccTAATTCAAAATCTTtggaaaatatacaacatacAACAAATTCTCAAGAGATTTCAATAAGAAGAGATTCTTTCaacaaaatgaaatctttATTTACTCTTGAAACTCTTAAGATAATACCAAATGATAAAGATTTAGCTAATAACAAATCTATTGAAAACAGTAGTATAGATCATTCAAATGTGCAACAAGATTTACAAAGTATTTTCATATCTCcaaaacataataaaagtGTTCTAAAATCTACAACTGGTTCAGCAAGTAgtttgacaaaaaaaaaagttatttttgatttaactaataatgaaagtataaaatcatCTTCCGATGATGTTACGGACAAAGAAGAGTTAAATGACAGTAATTGGAATTCTTCGATTATGTTTGACAAGCAAAAACATTTGTGTCAATCAGAAGATTATAAAGGTTCaaacaatattgtattaaGGACTGCACAAAGTGATAAAATTGcggaaatatcaaaaaagCTTGAAGCACAGctAAATATGGTAAGACAAAAGCCTGTAGGATCagttgaaacaatattttcttcaacatACATGCAAAATAAAGAGAATCAAATTAAGAGCaacgaacaaataaattctactaGTATAAATTCTCTTTTAGTAAATCCATTCCAAGCATCTGTAACAAATTCTAAAGAAATGAATGATTCGCTACCACAACCAGCACCGCGTAATTTAAGAGATAAAATGTCTAATACCTTAGATGCAGAATCTATATCAGAAATATCAGATTTAGATTCTGATAtagatcaaattttaaaattagaaAACAAAATGATGCCAATGTCTAATATATTTTGCTCAATATGCGATATGAAAATTGATCCTTCATcttctgtaaatatattttctacatcttTTCCTCATCAAGGAGAATTGTtagtaaattttgtatcacAAGTACTTCGTATAGCTACTTTTGAATTACAAGACCCTTACATTTGTCTACAATGTtacaatttgtttcaaatgttAGAACAAGCACAGAAAACTGTTTTAAACATACGTTGtgagattttgaaaatatatcatgcttgtgaaagaagaaaaaatgttaaacgatCAATGTACGATggtacaaaattgaatatcagTACAAACATAGCATTAGaagcaaaaaaattatataatagtaatgaGAACTTAAAGAAGGTattgaatttacaaaatgCTACTCAAGTAGAGGAAATAGAACAAGAACAATGTGTTCAAGATAATACAATACTGCAAAATATAAGTATTGCAAATACAAAAGCAAAGAAACACTTAAGAAAGGAAACAATCAATTATAATGAAGCAGATAGCACAAAATCatttgattataatatttatgatgacataaaagatgaaattttaaaaaatgatatatttcacAATTCAGTGGCATTAACTAATAGTGgtaatacatgtaatattaattcacaAGGAAATACACatgcattaaaaattcatgttgCAGAAAAAAGCTGTATTTCACTGACAGATCCTGAAAGTGAATCAAAAAATACTGTAAAAACAGAATCCACATTTTCTgacaatatattacaaatacaaaatgttgaaaatattataaaaataacagaaaatactGTGAACACAACagtgTCAGCAGTTGACCCAATAAAAATAcctataaaatcaataaagaTACCAAAGTAtgatttaaaatcattaaaatattcttgtcCTATTTGTGGTAAAGTATGGAAAACATCGACTGAATTAAAAACACACATGAAAACTCATTCAACATTAAGACCATACATGTGTGAAAAATGTGGTCAGGcatataaacataaacatgCATTGGAAATACATGTTGGAATGCATAATGGAATAAATCCATttcaatgtaatttttgtaaaaagtgCTTTACACAAAAAGGAGCACTTATGAGACATTTACCAATGCATACCGGTGAAATGCCCTATCAATGTGAACTGTGTGGTAAAAGATTCATACACCATACATCATACAATATGCACAGATTATCACATAGTGGTAAAAAATCTTATAAGTGTCAAATGTGTGATTTGTCTTTGCTTTCAACATCTCATTTGAAAAGGCATATGCGAGTTCATACAGGTGAAAAACCATATAGCTGTACAGTGTGTGGAAAACGTTTTGCAGAACGATATAATTTGCTTGCCCATCAAAAAATTCATGATCCACACGAAAATAAGgcaaaaaaagtaaaagaaacgCAATTCCaATGTAATCAttgtaatttgatatttgaacAGAAAAAAAGCTTAAATGATCATATGAAGTATCATTCTAATGTGAATAGTGAATCTGATTTTAAACAATCACAATGTACACTTCTTCAAGTTGAACCAGAACATCATGAACTATCAAAAAAGGTAGATTCTGAACACAGTGTATTACAAGAAACTTGGATTCAAATGAATCGTTCTAAATTAGACATTATTGATAATCAAACAAGATTTGTACTTCTACAAAATTCTTTACCTCAGATTGACGAAAATTCCTTTGCAGTTACATTTAGTGACCAAAAAATATCCTTGGGAAGTACAaactataatacaaatttacatgTAATCATAGAACCATCAGATATATCACTTTTAAGCAATAATCTTCCTTCTATTGATAAAATGCATATGTGA
- Protein Sequence
- MAFSFRIGTKWCHDFPKLAKESGFYFNMHRSRTRVDWNRISNIDIDRIIRERDFHSIDDNINNVIDYCLESEYDVKILDPNFVKLFCLAQLAVEYLLYCKQYLDHSVIILKDELRSKIEENVKLKKEITALEEVVKHMKEKVKEKSKLIETKIGDTNGEIYKCPHCPKSFISPMFVSAHIIRRHAYASELYMPTSPIHEHYRSETEKLHNEIKNLKERLNETEKVIRNESERISEEKILSYNRRQAESENENFRYNSNKSKEHSEYKEYQEEIKNLKTMLFDEIHNLRQKEKTMHEHTSETNVQTFINQQEKEFQKLKNQLLDKLTPDIESMHTKLQAQENYWKSKIEHLENQHQKDVESLIAELKLTQSAADDMKAKYETKVNDLERQTANQLDILLEQSKQLQSLSQEINVSQLNEKNKDFENNSLRRRSPPIILDKLNEILKASDETNSKQNGTNTKTEQIAVGNSVIDTTISSSLSSKVLPLTVENTHLKKVSNSRNKSTIHENRRNIKQKDIRNRNNTIFNPVKTIEKDLEYYSSSNISDTEISVPEKGNNYEHTKYNRVIIKSDELGISKPQDIFNKSISDEFLSNSKNTKTSKSLEDNVSSSNSESFVSDSSTENVTAIHNNSPFHEHKTHLPKKITGHSSFYKRLQTSLMETFEQKLRDLGVDPEWQGIPKATFKQKMDILKHHHKLTAKKTPKYHQIKLRIIEEVLNKISKKKKVTENVKQFKNSPLHKPIITVKSMVAKDLNHQHDPGQATTSNKFHSIPEDKDFARNILENKSVPTKATKIANYESIEKLLQFSPNSKSLENIQHTTNSQEISIRRDSFNKMKSLFTLETLKIIPNDKDLANNKSIENSSIDHSNVQQDLQSIFISPKHNKSVLKSTTGSASSLTKKKVIFDLTNNESIKSSSDDVTDKEELNDSNWNSSIMFDKQKHLCQSEDYKGSNNIVLRTAQSDKIAEISKKLEAQLNMVRQKPVGSVETIFSSTYMQNKENQIKSNEQINSTSINSLLVNPFQASVTNSKEMNDSLPQPAPRNLRDKMSNTLDAESISEISDLDSDIDQILKLENKMMPMSNIFCSICDMKIDPSSSVNIFSTSFPHQGELLVNFVSQVLRIATFELQDPYICLQCYNLFQMLEQAQKTVLNIRCEILKIYHACERRKNVKRSMYDGTKLNISTNIALEAKKLYNSNENLKKVLNLQNATQVEEIEQEQCVQDNTILQNISIANTKAKKHLRKETINYNEADSTKSFDYNIYDDIKDEILKNDIFHNSVALTNSGNTCNINSQGNTHALKIHVAEKSCISLTDPESESKNTVKTESTFSDNILQIQNVENIIKITENTVNTTVSAVDPIKIPIKSIKIPKYDLKSLKYSCPICGKVWKTSTELKTHMKTHSTLRPYMCEKCGQAYKHKHALEIHVGMHNGINPFQCNFCKKCFTQKGALMRHLPMHTGEMPYQCELCGKRFIHHTSYNMHRLSHSGKKSYKCQMCDLSLLSTSHLKRHMRVHTGEKPYSCTVCGKRFAERYNLLAHQKIHDPHENKAKKVKETQFQCNHCNLIFEQKKSLNDHMKYHSNVNSESDFKQSQCTLLQVEPEHHELSKKVDSEHSVLQETWIQMNRSKLDIIDNQTRFVLLQNSLPQIDENSFAVTFSDQKISLGSTNYNTNLHVIIEPSDISLLSNNLPSIDKMHM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -