Basic Information

Insect: Bombus hortorum
Gene Symbol: slc38a11
Assembly: GCA_905332935.1
Location: HG995197.1:12836500-12855350[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.82 88 4.1 0.2 9 23 740 754 739 754 0.92

2 11 0.0056 0.6 10.9 0.9 1 23 762 785 762 785 0.95

3 11 0.00032 0.035 14.8 3.3 1 23 842 864 842 864 0.98

4 11 2.8e-06 0.0003 21.3 1.5 2 23 914 935 913 935 0.97

5 11 2.5e-05 0.0027 18.3 0.8 1 23 940 963 940 963 0.96

6 11 7e-06 0.00075 20.1 0.3 1 23 1001 1023 1001 1023 0.98

7 11 1.2e-06 0.00013 22.5 0.9 1 23 1033 1055 1033 1055 0.96

8 11 3.4e-06 0.00036 21.1 1.2 1 23 1061 1083 1061 1083 0.99

9 11 1.7e-05 0.0018 18.9 0.2 1 23 1089 1111 1089 1111 0.98

10 11 0.0001 0.011 16.4 4.9 1 23 1117 1139 1117 1139 0.98

11 11 0.00051 0.054 14.2 0.4 1 21 1145 1165 1145 1166 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.82	88	4.1	0.2	9	23	740	754	739	754	0.92
2	11	0.0056	0.6	10.9	0.9	1	23	762	785	762	785	0.95
3	11	0.00032	0.035	14.8	3.3	1	23	842	864	842	864	0.98
4	11	2.8e-06	0.0003	21.3	1.5	2	23	914	935	913	935	0.97
5	11	2.5e-05	0.0027	18.3	0.8	1	23	940	963	940	963	0.96
6	11	7e-06	0.00075	20.1	0.3	1	23	1001	1023	1001	1023	0.98
7	11	1.2e-06	0.00013	22.5	0.9	1	23	1033	1055	1033	1055	0.96
8	11	3.4e-06	0.00036	21.1	1.2	1	23	1061	1083	1061	1083	0.99
9	11	1.7e-05	0.0018	18.9	0.2	1	23	1089	1111	1089	1111	0.98
10	11	0.0001	0.011	16.4	4.9	1	23	1117	1139	1117	1139	0.98
11	11	0.00051	0.054	14.2	0.4	1	21	1145	1165	1145	1166	0.94

Sequence Information

Coding Sequence: ATGGCTTTGGACGCGAACGAGAAGAGCTATATCCTGGACGCGAGGAACAACTACGAGGACGGTGGCAGTCTGGGTTCGGAGGAATCTTACGACGACATGCGACAACTTGTCGGGGAAAAAAACGAAGAATCTGGAAAATTCAGTAGTCTACCCCTGGCCAGTTTTAATTTCATCAATTCCATCATTGGCAGTGGTGTTATTGGTATACCCTACGCTCTTCATCAGGCTGGATTTGGCCTCGGGATAGTATTATTAATACTAGTAGCAGGCCTCACTGATTACTCTTTAATTTTAATGATCAGGAGTGGAAACATTTGCGGTGAAATGAGTTACCAGGGTTTAATGAGAGCCAGTTTCGGTCGTACAGGATTCTATATTCTTACGACTCTGCAGTTCATTTATCCATTCATAGCGATGGTCTCTTATAACGTTGTTGTCGGCGACACGGTGACGAAAGTGCTAATAAGGGTAACAGGGATGAGCGAGACAAGCATTTTCGCTCATCGTCAAGTGGTCGTCTTGTTCGCGACCGTTTGCATCACTATACCGCTGTGTCTTTATAGAAATGTTGCTCGTTTGGCCAAGATCTCGTTTCTTTCGTTGGTCTGCGTTGGTTTCATTCTATTGGCTATTTTAATTCGGATGGGTACGATGTCAGCAATTGTGCCAAGCCAAGAGGATAGTTGGCGATTCGCGAATTTCCCCGGCATTATTCCATCCGTTGGAATTATGGCATTCGCCTTTATGTGCCACCATAATACATTCCTTATCTACGAGTCTATAGAAAGGGCTACTCAACAAAAGTGGGACATCGTCACCCATTGGTCGCTCTTCACTTCCTTCGTGATCGCAACAGCTTTTGGAATCATCGGATATGCCACGTTTACCGCGTACGTTCAGGGCGATCTTATGGAAAATTACTGCTGGGACGATGATCTCATGAACTTTGCCAGAATCATGTTCAGCGGGACTATTCTACTTACTTTTCCCATTGAATGCTTCGTCACAAGGGAGGTAATACTGACAGCGATTAAAGGGACCGATGAGCTCGAAGATCATACTGCATACGTCCCTAACTCCGACCGGAAATACTTGATAATAACTTTGTCAATAGTGGTTGTCGCATACCTGATATCGATGTCAACAGATTGTCTGGGTGTCGTTCTCGAATTGAATGGAATCCTCGCTGCTGTACCTCTAGCTTACGTTTTACCTGGCCTGTGCTACCTCAAACTCGAAGATGGACCAATTTTTTCCTCCAAAAAGCTTCCGGCGCTTGGTTTGATGTCCGCTGGCGTGTTTGCCGCGGTCTCTGGTTTGCTGTTGCTGATCCTGAACAACGATACTTCCAGTTCCTGCGTGCATGGACAGAGGGGGAGATCGAGTCGTAGCTTGACTTCCAAATGCATTAAAATGGAAGTTTCGAAAAACGAGCAATTAGTTGATACATATGAGAGAATTTATGGAGATGAATGTCGAATCTGTTTGAAAAAAGCTGTTGAAATTTGTGAACTTTTTAAAAATGGGGACGCTATTCCTCGAAAACTTATGGCCGTTGCTTCTGTACAGATTGCAGAAGGAGACGGTTTACCACCAGTGATTTGCTTGCCTTGTAACCAACGTTTAGATGCATCCTACGATTTTAAATGTCAAATACAAAATTCAGATGAGAAGCTTCGTCAAATTCTAAAGCTGAAATCCTCTTCTAACGATTCTGTTACCAATGCCAGCAGCATAGTTACAGCAATAATCGCTGATGTGATATCTAGCGTAATATCTTCCGAGAAAGAAAATACAGAAAAACAAGAAGTTTGTTCTACAAATTTCTGCAGTGATAATTTTTGCTTTACAAAAGATGAAACAGCTTTTTGTCTCAATTCAGAGAAGAACTTGTTTTGTTACGAAAAAGAATCATCACACAGTCGATTAAACGATACAGAGCAAAGAAAGAGCCTAGAAAATGTAAATGTTTATAAGAGTTTATTAGAGGATGATTCTGTAAGACAAATCAATTCGATAAAACAAGAGTTTGTTTTATTAGATGAACATATGGTACAAACTAAAGATGTTCCGTTAAAAGGAGAAGCGAGTATCGAAGAAAGTCAACAGATGTCAGAAGAGACATCAAAGACAGATAGTATTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATCATGTCTTTTCGTACAAAAGTGGCCTTGCAGAGACACTCCATTGTACATAAACGTAAAACCAAATTACGGTATGTTTGTTATGTTTGCGATAAACAATATTCTACGCTTGCAAAAGTGAAAAATCATGTTGCAATTTGCCACGAAGCTCGCGATAGGAAAGAAAATATTCAACATAAGAGAATTAGTTATGAGCAAAATAAAGCAATCGCGAGTGTACAAGATAAAAGGATTAATAGTAATGTCCAAGATAAAAGAATAAAAATTCAAAAAAATGATGACTCTCCTAAGGAACAACGAAAAAGCTTAAAATTTACTTGCAAAGTGTGTTCAAAACAATTTACTTATCAAAAATCTTTTATCACACACGCTAAAAGTCATGCAGAGTATAAACTGGAAGAATTGGATGATTCGTCTCAATGTTGGGTAAAAGAAAGATGTACAGAAACCGTGGTGGAAGAAGAAGAAAATGAAGAAGAGGAAGACGAAGAAGATGAGGAAGATGAAAACCTTCCTGCTGAAAGTTTACAATGCACTCAGTGTGGGAAATTATTTGCAACAAAAAGAAATCTTAAAAGGCATGTCTCCACACATAGTGGATTAAAATATACGTGTGAAACATGTGGTAAAGGATTCTCAAGAGTGGATAAATTAAAAGATCATGAACAATCAAAGCACAAGGCTGAATTATTCGACAATTCTGATTTGGATGATAAAGAGGACACGGACAATGTAGTTAATAAAGGTGACTGTTTAGAAGGAAGAAAGAAAGATCGTCACAATAGACCTCACAAATGTGCAATCTGCCCTAAATCGTTCGCGCAAGCGCAATCGCTAGCGAATCACATAGAACGTCATAAGCGGGTAAAAGAAACTCAAAAAAGATTTCTTTGCGAAGTCTGTAGCAAGTGTTTTGCACAGAGTGGTTCTCTGGTTGCGCACATGCGTACACATACAGGAGTTAAGCCATATGTTTGTAACGTGTGTAGTAGAGCATTTACAAAGAGCACTTATTTACAATTACATCTACGTACTCATAGCGGTGAAAAACCTTATATTTGCCAGTATTGTAGCAGGGCGTTTGCACGTGCTAACACATTAGCACGACACATAACAATGCATACAGGGGAAGCAAAATATCATTGTCAGATTTGTAAAAAATCATTTAGAAGACTGACTTCGTTGAATGAACACACTTATACGCACACTGGGCAGAGACCATACGCTTGCAAAATTTGTACAAAGAGATATAACAATGCAGGGTCACTTTACGCGCATAGAAAGAAGTGCAAGGCACAGCAATTGTCTAATCCTGGATTCGCGGTTTCCGTGGAAACCTGTACTGTATCAGAACAACAAGAAGTAGACGTACCGCAAGTTTTAATCTATTCCCACAGGAAATTAGTAGAGGACGCAACTGTTGGGCAAGTCACGCCCACACCACAGTACATGCTGGCAAATGTACACAATCAGAAGAATTTGGGATCAAATATTATACAACCGTTTCCAGTGGATGATTCAAATGTTTATACAATTAATACGAAGCAATTTAAGAATCCTTATTATACAATTTATCCAAACATGTAA
Protein Sequence: MALDANEKSYILDARNNYEDGGSLGSEESYDDMRQLVGEKNEESGKFSSLPLASFNFINSIIGSGVIGIPYALHQAGFGLGIVLLILVAGLTDYSLILMIRSGNICGEMSYQGLMRASFGRTGFYILTTLQFIYPFIAMVSYNVVVGDTVTKVLIRVTGMSETSIFAHRQVVVLFATVCITIPLCLYRNVARLAKISFLSLVCVGFILLAILIRMGTMSAIVPSQEDSWRFANFPGIIPSVGIMAFAFMCHHNTFLIYESIERATQQKWDIVTHWSLFTSFVIATAFGIIGYATFTAYVQGDLMENYCWDDDLMNFARIMFSGTILLTFPIECFVTREVILTAIKGTDELEDHTAYVPNSDRKYLIITLSIVVVAYLISMSTDCLGVVLELNGILAAVPLAYVLPGLCYLKLEDGPIFSSKKLPALGLMSAGVFAAVSGLLLLILNNDTSSSCVHGQRGRSSRSLTSKCIKMEVSKNEQLVDTYERIYGDECRICLKKAVEICELFKNGDAIPRKLMAVASVQIAEGDGLPPVICLPCNQRLDASYDFKCQIQNSDEKLRQILKLKSSSNDSVTNASSIVTAIIADVISSVISSEKENTEKQEVCSTNFCSDNFCFTKDETAFCLNSEKNLFCYEKESSHSRLNDTEQRKSLENVNVYKSLLEDDSVRQINSIKQEFVLLDEHMVQTKDVPLKGEASIEESQQMSEETSKTDSIXXXXXXXXXXXXXXXXXXXXXXXIMSFRTKVALQRHSIVHKRKTKLRYVCYVCDKQYSTLAKVKNHVAICHEARDRKENIQHKRISYEQNKAIASVQDKRINSNVQDKRIKIQKNDDSPKEQRKSLKFTCKVCSKQFTYQKSFITHAKSHAEYKLEELDDSSQCWVKERCTETVVEEEENEEEEDEEDEEDENLPAESLQCTQCGKLFATKRNLKRHVSTHSGLKYTCETCGKGFSRVDKLKDHEQSKHKAELFDNSDLDDKEDTDNVVNKGDCLEGRKKDRHNRPHKCAICPKSFAQAQSLANHIERHKRVKETQKRFLCEVCSKCFAQSGSLVAHMRTHTGVKPYVCNVCSRAFTKSTYLQLHLRTHSGEKPYICQYCSRAFARANTLARHITMHTGEAKYHCQICKKSFRRLTSLNEHTYTHTGQRPYACKICTKRYNNAGSLYAHRKKCKAQQLSNPGFAVSVETCTVSEQQEVDVPQVLIYSHRKLVEDATVGQVTPTPQYMLANVHNQKNLGSNIIQPFPVDDSNVYTINTKQFKNPYYTIYPNM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00141354;
90% Identity: iTF_00233379;
80% Identity: -