Bdif010981.1
Basic Information
- Insect
- Bombus difficillimus
- Gene Symbol
- lov_1
- Assembly
- GCA_014737525.1
- Location
- JACXIT010000243.1:43313-48328[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-18 3.1e-15 55.8 0.0 1 44 485 528 485 529 0.96
Sequence Information
- Coding Sequence
- ATGTCGAGCGCCGCGGACAGTCCTGATGGGATGGCTTTGCAGTCGCACTATTCCTTACGATGGAACAATCATCAGACGCACATACTTCAAGCCTTCGAGGCGTTGCTACACGCGGAGATACTTGTCGACGTGACCCTGGTCTGCGCCGAGACCAGCCTCAGGGCGCATAAGGTTGTGCTTAGTGCCTGCAGCCCATTCTTCGAAAGGATATTTGCCGAGCACCCCTGCAAACATCCGGTGATCGTACTAAAGGATTTTCCTGGGCACGAAGTTGCTGCGCTGATCGACTTTATGTACCGTGGCGAGGTGAGGGTCGGTCGCGATGATCTCGCAGGACTGATGAGAGCCGCGGAGAGTCTACAGGTGCGTGGATTAGCCTCGTCGGAACCGAGGCCGACGTCGCCGCCGGAAACGCCGACCGCCGATCTGCTGCTTGGCGAACCGTCGACACCCGAGGGCGCGAGGCAAGAAACTCCAGAGGAGGATGACAACGTTTCGGAGAGCACGGCGCCGCCGTCCACGCGAGAACCGATACCGGCAGCGGCACCCGCCATTTTTCACCCTAGCAGGGACCATCGCGATAGGTTACCGCACATGGGCCATCTGAACTTTGGGGTACGCGAACCGCGAGAGAGTTGCTCATCGCCGTTGCTACCTCGACGAAAACAGGCTCGGCCGCGAAGAAGATCCGGCGAATTGGTGCCGCAGGATCTCAGTCGACCTCATCCACCGCCGAGTATTAGCCCGTTGGCGAGCGGATTGAATCTGGCCGGTGTTAATCAACAATCGCAACACCAACAACATCAACAGCCCTCGAACTCGAGCACCCAGAACCACCTACAGCAGGAGGATATAGCGGAGAATCTTTCGATGAAGAGATCGTCGTCGCCCAACGGTGCCGACCATCACAACGTAAAAGCGGAAAGCAGCGAAGCGGCCAGTAGTCCGAGGGGATCTCCGTTAACCGGCACGAGTCTGCTGCATCCCGACGGTTCCCTCCAAGATATTCCGTCTGCTGCGGCAGCAGCGGCGGCCGCTGCCGCCGCCGCCGGCTTACCCACGATGTCGGCCCTGTCGCTGACATCGCCGCATCATCACAGCGAGTACCTGACGAGTTTGGGCCAGTTAGCGGCCCAGTGGTTACCGAATCATCCTCAGAGCCAATTGCCGCCGCCTCCACCTCAGGGTAGCGGACTGTTTCCACACGCGGGTGCTCTCGACAGAGGATCCCTTTTGGCGGATCTTCACGATAGCTTTAAACCGGAAACGTTGCACGGACTTTTCGGCGCGGCGGCTTTGACCGGCCATCATTCGGGGAAAAAGCCAAAGAAACACAGGGGCAGCGACGGCGACGCGGCGCGCAGATGGGCAGACCACAGCGGTCGAGGACTGCCGGTTGGAAGGCCGAAAGGTCAGCACAGCGCACCCAGGGGCGGGCCGCCACGATCTTGGACGAACGCGGAGCTGACCGAGGCGTTGCAGCACGTTTGGAACAAGAAGATGACCACGTCGCAAGCGAGCAGAATCTTCGGTATACCGTACAACAGTCTATTGATGTACGTGCGAGGCAAATACGGGAAAAGTTTGAAGCTCGAACAACTGAGAAGGGACTGCACGGGCTCGACAACGAGCGAGGTAGTAATAAATTCGTTGAACAACAACGTTAAGGCCGTCCAGCCGCCGACGCAGATGGCTCATCCGCTCGCCGGTCTACCACCGCACCCGGGCGACGACGGTGTGTTTCCTCATCACTCGTTGCTCGGCGCTAATCTACCACAGGGTTTCTTTCCTGACTTTGCCGCCGCCGCGTTCCCCGTGCCGTCGGCACCCACGCTACTTCAACAAAACGGTTCGGATTAG
- Protein Sequence
- MSSAADSPDGMALQSHYSLRWNNHQTHILQAFEALLHAEILVDVTLVCAETSLRAHKVVLSACSPFFERIFAEHPCKHPVIVLKDFPGHEVAALIDFMYRGEVRVGRDDLAGLMRAAESLQVRGLASSEPRPTSPPETPTADLLLGEPSTPEGARQETPEEDDNVSESTAPPSTREPIPAAAPAIFHPSRDHRDRLPHMGHLNFGVREPRESCSSPLLPRRKQARPRRRSGELVPQDLSRPHPPPSISPLASGLNLAGVNQQSQHQQHQQPSNSSTQNHLQQEDIAENLSMKRSSSPNGADHHNVKAESSEAASSPRGSPLTGTSLLHPDGSLQDIPSAAAAAAAAAAAAGLPTMSALSLTSPHHHSEYLTSLGQLAAQWLPNHPQSQLPPPPPQGSGLFPHAGALDRGSLLADLHDSFKPETLHGLFGAAALTGHHSGKKPKKHRGSDGDAARRWADHSGRGLPVGRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRRDCTGSTTSEVVINSLNNNVKAVQPPTQMAHPLAGLPPHPGDDGVFPHHSLLGANLPQGFFPDFAAAAFPVPSAPTLLQQNGSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00219214; iTF_00231417; iTF_00231234; iTF_00233146; iTF_00233328; iTF_00214941; iTF_00215123;
- 90% Identity
- iTF_00219214; iTF_00231417; iTF_00231234;
- 80% Identity
- iTF_00219214;