Basic Information

Gene Symbol
KDM5A
Assembly
GCA_014737525.1
Location
JACXIT010000202.1:954950-965349[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 9.1e-26 3.6e-22 78.7 0.0 2 89 109 192 108 192 0.94
2 3 2.4 9.6e+03 -2.8 0.1 49 81 823 853 820 857 0.65
3 3 1.5 6.1e+03 -2.2 0.0 49 64 1033 1048 1030 1059 0.77

Sequence Information

Coding Sequence
ATGGTATCGAGGTTCGACACGAACTTCGGTTGTGAAGACTTTTTCGGGACTTATCGTTGCATCCAAGACATGGCTTGTGATCGTGGTGATTCGGACTTCGAGTTCGTCATACCTCCAGAGGCGCCGGTTTTCGAACCGAGTATCGAAGAGTTTCACGACCCTCTTGGCTACATTGCAAAAATACGACCGATCGCAGAGAAGTCTGGCATTTGTAAGATCAAACCGCCGCCTAATTGGCAGCCACCGTTTGCTGTTGATGTAGATAAATTCAAATTTGTTCCAAGAATACAAAGGCTAAATGAATTGGAGGCAAAAACCAGGATAAAACTTAATTTCTTGGATCAGATTGCAAAATTCTGGGAACTTCAAGGTTCATCTTTAAAAATCCCCCTTGTTGAACGCAAGGCTCTTGATTTATATTCTTTACATAAGATAGTTACCGATGAAGGAGGAATTGACACAGTTACGAAGGAAAGGAGATGGGCAAAAATTGCAAATAAATTAGGTTATCCTTCTGGTCGTAGCGTTGGAAGTATTCTAAAAAATCACTACGAACGTATTTTATATCCATTTGATGTGTTTAAACAAGGAAAAACATTGGCAGATATTAAAATTGAACCAGATTCTAATGTAAATGAGAAAAAAGATAGAGATTATAAACCACATGGAATTATATCACGACAACAAATTAAACCCCCACCTGAGAAATTTTCCCGGCGTTCTAAGAGGTTTAGTGGTCAAGAAGAAAAACAGGAAGTATCTATTAAACAAGAGGATTGTAAAGAGGAATGTGATTCTGACAATGATTGTAAAGATGGAATTAGAAATAAACAATATGATGATAAAGATAATAGTAAAGAACTTAAAAAATTACAGTTTTATGGACCTGGCCCAAAAATGGCTGGATTTAATACCAAAGAAGGAAAAAAATCAAATAAAACTAGAGGTGTAAAACTTATTTATGAAGTTGACCCATTGGCAAAGTATATTTGTCACAATTGCGGAAGAGGTGATAATGAAGAAAGCATGCTTTTATGTGATGGATGTGATGATAGTTATCATACTTTTTGTCTTATGCCACCATTGACAGAAATACCAAAAGGTGATTGGAGATGTCCAAAGTGTGTTGCTGAAGAAGTTTCCAAGCCAATGGAAGCATTCGGATTTGAGCAAGCACAAAGAGAATATACACTTCAACAATTTGGAGAAATGGCTGACCAATTTAAGAGCGATTATTTTAACATGCCTGTACATATGGTGCCAACATCACTAGTAGAAAAAGAATTTTGGCGAATAGTTTCTTCAATCGATGAAGATGTAACAGTTGAATATGGCGCAGATTTACATACAATGGATCACGGGTCGGGATTTCCAACAAAAACAAGCGTCAATTTGTTTACATGTGATCAAGAATATGCTGAATCTTCATGGAATTTGAACAATTTACCAATTTTACGAGGAAGTGTATTAGGTCATATAAATGCTGATATTAGTGGTATGAAAGTTCCATGGATGTATGTTGGAATGTGTTTTGCAACATTTTGTTGGCATAATGAGGATCACTGGAGTTATTCAATCAATTATCTACACTGGGGAGAGCCGAAAACATGGTATGGTGTACCGGGTTCTGAAGCGGAACGATTTGAACATTCAATGAAATCGGCTGCACCAGAATTGTTTCATAGTCAACCAGATTTACTTCATCAGTTAGTTACTATTATGAATCCAAACATTTTAACGAATGAAGGCGTTCCAGTATTCAGAACCGATCAACACGCGGGAGAATTTGTAGTGACATTTCCGAGAGCGTATCACGCAGGTTTTAATCAGGGTTACAATTTTGCTGAAGCCGTGAATTTTGCTCCCGCTGATTGGCTCAAAATTGGACGAGATTGTATAACGCATTATTCAAATTTAAGACGATTTTGTGTATTTTCTCATGATGAATTGGTGTGCAAAATGTCATTGGACCCAGACTCATTAGATATAGGAATTGCAACTGCAACTTACCATGATATGCTTCAAATGGTAGATGATGAGAAGAAACTACGGAAGAATCTGTTGGAATGGGGTGTAACAGAAGCAGAACGAGAAGCATTTGAACTTTTACCGGACGATGAGAGACAGTGTGAAGCTTGCAAGACAACTTGTTTTTTGAGTGCAGTTACATGTTCATGCCAAAGTTCTCAATTAGTTTGTTTAAGGCATTTCACAGATCTTTGTGATTGTCCTCCAGATAAGCATACACTACGTTATCGCTATACTCTAGACGAATTACCAATTATGTTACAAAAATTAAAATTGAAAGCAGAGTCATTTGACTCTTGGGTGACAAAAGTAAAAGAGGCAATGGATCCTGATAAAAAGAGTGATAAAATTGAATTAAGTGAATTAAAAGAACTGTTAAATGAAGCCGAAAGTAAAAAATTTCCAGAAAGTGAATTGCTTACAGCTTTAACAACTGCTGTACAAGATGCTGAAAAGTGTGCAAGTGTTGCACAACAACTTTTGAGTAATAAACAACGTACCAGAACCAGACAATCTGTTGAAACTAAGTACAAGCTTACAGTAGAAGAATTAACACTTTTCTATAAAGAAATAACAAATCTGTGCTGTGAACTCAAGGAGTCTGATGGTGTAAAATTTATACTTGATCAAGTATTGCAATTTCAAACAGAAGCAGAAGAACTAGAATCTAAAGAGGATGATTGTAATATCGAACAGTTGGAAAAATGTATTGAATTTGGAGATTCTATTTGTATTGAACTACCTCAACTTACACATTTGAGACAAAAATTGGCACAAATACAATGGCTTGAGGAAGTAAAGTCTGTTCAAGAAGATCCGAAGTCAGTACATCGTGATGATTTAGCAAAATTAATTGAGAAAGGTATGATAATGCCTCCTCATTTAAGTATAGAAAATACTCTCTCAGAGTTGCAAGCATTAATGCTTGCAATTGATGATTGGGAAGAAAAAGCAAAATTATATTTCCATACAAAAAATAGACAAACTATTACATCTCTCGAAGAATTTATTCGTGAAGCTGATAAAGTAGAAGCTTACCTACCAAGCTTAGATATCCTTCAAGATACATTAAACAAAGCAAAAAATTGGACAAAAATAATGGAAGAGATACAAGCAAGAGATAACTTTCCATATTATAATACACTAGATGATTTAATAAAAAAAGGTAGAAATATTCCACTGCACCTAGATGCTCTTCCAATCTTAGAATCTACTCTTTCACAAGCGAAAACCTGGAAAGAAAGGACAGCAAGAACATTCCTAAGGAAAAATTCACATTATACTTTAATGGAAGCTTTATCACCACGAATTGGCGTTGGTATACAAGCGTTAAAAGCTAAAAAGAGTAAGAATGAAGATTCTATAGGACCTGTATTTGTCTGTGATACAAAATTGGATGATTCCAATGATTCAGCTACCGTTGTAGCTGCGTTTAAATTAGCTGAACAACGCGAAATGGAAGCGATGCGAAATTTAAGGGAAAGAAACTTAATGAAAACCGAAATTGACGATTCAAGGTATTGTGTTTGTCGTCGACCAAGATTCGGGCTCATGCTTCAGTGTGAGCTTTGTAAGGATTGGTTTCACTCAAACTGTGTACCTTTACCAAAGACATCGTATAAAGGAAAATTTCCAATGTCAAGAGAAATTAAATTTTTATGTCCATGTTGCTTACGTTCACGACGGCCACGGTTAGAAACGATTCTTGCACTTTTAGTTAGTCTTCAAAAAATTCCTATTCGTTTACCAGAAGGTGAAGCATTACAATGTTTAACGGAACGTGCAATGAATTGGCAGGATCGAGCTCGACAGGCACTAGCCACGGATGAAATTTCATCTGCGCTGGCAAAATTGTCTGTGTTATCACAGAAATTAGTGGAAGCAGCTGCAAGGGAAAAGACAGAAAAGATTATTAGCAGCGAACTGAAAAAGGCAGCAAATAATCCTGAATTACATCAGAGAGTACAAGCAATTGCCCCACTCAGTGGTGTGCATTCAGATGATAGTGTAGTTAGTATTGCGGATGATGATGACGACGTTGTTACTATAGATGACGATGAGCCAAGTTGTAGTACATTCAATAGTAACGAACATGCGTATTCCTATATATCAAAAATTCAGCGTAAAACACAATCAAATGATGCAACGGAAATTGCGGTTGTACTTTCACAAACAGCAAGGTTACGTCTAGAAGAACTGATGATGGAAGGCGATTTATTAGAAGTTGCACTCGATGAAACACAACACATCTGGCGTATACTATGTCATACAAATAGTCCTAGTACGGTTCGAAAGTATGCATCATACGAGGAAGTGCAAACTAACTTGAATCAGGATATAAAGGATGTAAAAAAGCGTGGAAGGAAAAGAAAATCCGACGAATTTGAATTATTGAAAAAACTTGGAAGACAAAAAATGGAAGAAAAGAATTTAGCTAAGCGCAAAACATTGCAGAAAGAAAAAAAATCAGCTAGTTCTCTAGTTCCAATAAAGCGTGGACCTCGAAAGATGAAACGTAAAGAAGGAGAAGAAGGCCCAAAGAAAAGGGGTGGTAACAGGAAAAAGACCAAACAGGATACTTCAGATGAAGAAGATGATTGTGCGGCTGTTAATTGCTTACGACCTAGCGGTAGGGAAGTTGATTGGGTACAGTGTGATGGTGGCTGTGAAGGTTGGTTCCACATGCATTGTGTTGGTTTAGATCGTACAGAAATTGCAGAGGAGGATGATTACATATGTAGTAATTGTAAAGAAGCAGAGCAAAATTCAACGTCAAGAGCGCCAGATCCCCTAGCTGAATCATTAGGCCTGGATGCACTTCTTTCCCTTTCTCAATCTCAGGGATACCAGGGCACGGATAGTGAAGCAGACATTCAAGAAACCACATCCTTCGTCAAGACTTACTAG
Protein Sequence
MVSRFDTNFGCEDFFGTYRCIQDMACDRGDSDFEFVIPPEAPVFEPSIEEFHDPLGYIAKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHKIVTDEGGIDTVTKERRWAKIANKLGYPSGRSVGSILKNHYERILYPFDVFKQGKTLADIKIEPDSNVNEKKDRDYKPHGIISRQQIKPPPEKFSRRSKRFSGQEEKQEVSIKQEDCKEECDSDNDCKDGIRNKQYDDKDNSKELKKLQFYGPGPKMAGFNTKEGKKSNKTRGVKLIYEVDPLAKYICHNCGRGDNEESMLLCDGCDDSYHTFCLMPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTSLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPILRGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSEAERFEHSMKSAAPELFHSQPDLLHQLVTIMNPNILTNEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKIGRDCITHYSNLRRFCVFSHDELVCKMSLDPDSLDIGIATATYHDMLQMVDDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCSCQSSQLVCLRHFTDLCDCPPDKHTLRYRYTLDELPIMLQKLKLKAESFDSWVTKVKEAMDPDKKSDKIELSELKELLNEAESKKFPESELLTALTTAVQDAEKCASVAQQLLSNKQRTRTRQSVETKYKLTVEELTLFYKEITNLCCELKESDGVKFILDQVLQFQTEAEELESKEDDCNIEQLEKCIEFGDSICIELPQLTHLRQKLAQIQWLEEVKSVQEDPKSVHRDDLAKLIEKGMIMPPHLSIENTLSELQALMLAIDDWEEKAKLYFHTKNRQTITSLEEFIREADKVEAYLPSLDILQDTLNKAKNWTKIMEEIQARDNFPYYNTLDDLIKKGRNIPLHLDALPILESTLSQAKTWKERTARTFLRKNSHYTLMEALSPRIGVGIQALKAKKSKNEDSIGPVFVCDTKLDDSNDSATVVAAFKLAEQREMEAMRNLRERNLMKTEIDDSRYCVCRRPRFGLMLQCELCKDWFHSNCVPLPKTSYKGKFPMSREIKFLCPCCLRSRRPRLETILALLVSLQKIPIRLPEGEALQCLTERAMNWQDRARQALATDEISSALAKLSVLSQKLVEAAAREKTEKIISSELKKAANNPELHQRVQAIAPLSGVHSDDSVVSIADDDDDVVTIDDDEPSCSTFNSNEHAYSYISKIQRKTQSNDATEIAVVLSQTARLRLEELMMEGDLLEVALDETQHIWRILCHTNSPSTVRKYASYEEVQTNLNQDIKDVKKRGRKRKSDEFELLKKLGRQKMEEKNLAKRKTLQKEKKSASSLVPIKRGPRKMKRKEGEEGPKKRGGNRKKTKQDTSDEEDDCAAVNCLRPSGREVDWVQCDGGCEGWFHMHCVGLDRTEIAEEDDYICSNCKEAEQNSTSRAPDPLAESLGLDALLSLSQSQGYQGTDSEADIQETTSFVKTY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00873598;
90% Identity
iTF_00141055;
80% Identity
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