Bcul002924.1
Basic Information
- Insect
- Bombus cullumanus
- Gene Symbol
- pnr
- Assembly
- GCA_014737535.1
- Location
- JACXIX010000039.1:4418003-4422894[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.47 1.5e+03 -1.0 0.2 2 13 230 246 230 253 0.75 2 2 8.2e-17 2.5e-13 49.4 5.1 1 35 417 450 417 451 0.98
Sequence Information
- Coding Sequence
- ATGTTCGATGTACCGCCCAAGTTCTACGAGCTGTGTCGCCTTTGTTTATCGTCGGACGGTGTCAAATTGTCCATATTCGAAGAGGAAGGCGCCCAGCGGAACTTCGCCGATAAGATACTGACGTGCCTCTCGATTACGGTAAAAGATGGAGATTCTTTGCCACCAATCATTTGTCACCGGTGCGTGTACAAGTTGGATGTACTACACAACTTCCGTGAAGTGTCACACAAATCTGATGTCATACTCAAACAGTACCTGGATTATGCCAAGCAGTTATCATCACACGATGATCAGAAGAAATCTTTCTCCACTGCCAAAGTAGCAGGCTTAAGTCCTCTACAGTCATTTCTCCAATTGAACAAAACATTGTTCAATGAGGAGCCTAACTCTCCGGCCAGCATTAATCAAAACGTTATACCTCAGACTCAAACACATCATTTGGAGTTGTGCACCAATGACATGCCTGAGCATGATAACATTAAGTGTGAACCAGAAGATGATACGTGTTCAAATAGTTCTGATCCAGACAGATTAGAAATAGAAGATCGAGATGAGCAGGATACTGAGGGAGAAGAAAATGGTTATGATATGACCATTAACAAAAGAATGAAAGTAGAAACAAATTACGAAGAATCAAAAACGAGTACCCCTAATCGCAGTCCAGTAAATAGAATGGATACACCAGAAAGTAATTGTTCAGATACAAATATTGATCAAGAAACAACAAAGTTGTGGCAAGCATTAGCAAACAACAGGAGTTTAGAGATTACTAGGACGAATGGTGACAAATTAAATAATGGATTTACTGGTGAAGCGACTAATTTACTGCGTTCCTTGATCAACAACAGACAAATCGGTATTACTGCCGTTGATTCGGGTAGAATATCTCCGCAAATTAGGTTTTACAGAGACACCCAGGGGACAACGATCGAACGTACTGTATCCGACTGTTCTGTACTCGGCAATCGTACTAATGTTTCGTGTATAGAAAACAAGGGTACATCCGTGGACAGTAATCCGTCGAGTCCTGCCAGTATCGGTCGAAAGGAGACCAAGTGTCGTAGAAAACAAAGTTATCCTAGTAAAGCTCCAATGAGTCCAGACGTCGTTAATTATCAACACGAATCTAATGAAGAGCAAGCACAAGACTTTACAGCGTGGTCAAATAAAATGAAGGGAAAGGTGGAGGACCAAAAACAACAATTCGATCAACACAGTGGTAATATGGCGAAAAAGGTAGATATGTCCTGTACAAATTGCGGCACTATGACCACAACCATTTGGAGAAGGAATATGAAGGGGGAAATGGTTTGTAACGCTTGTGGACTCTATTACAAACTGCATGGAGTAAATCGTCCAGTTACCATGAGAAGGGACACGATACATACACGTAGACGCAGACCCAAAGGCGAGAAACCGACAAGGCATAGAAAAAAAGGTGACTCAATTTTGGCACCCCAATCAGAGCAAATGGATGCAGAAAGTGCGGACATGTTGGCAGCTCTTCGGCGACAAATTCAACCCCATTTGATGATGGCTGCATTAACGCCACCACGTATACCTGGTGCCCATCCACCAGCCCCTACCGCTCAACTTAATTATTCTCTTCCCTTACCTAGTTATATGATGCATCATGTAAAGGCAGAAGGGCGAGAACAATGTCATTTATCCACGGAGGCAGAAGAAACTGAAGCAGGAGATGAAGAGAATGTCTCGGACGTACCATTGAATTTGGTTGCGACGTCGTTATCCGAAGAAGCACACTGA
- Protein Sequence
- MFDVPPKFYELCRLCLSSDGVKLSIFEEEGAQRNFADKILTCLSITVKDGDSLPPIICHRCVYKLDVLHNFREVSHKSDVILKQYLDYAKQLSSHDDQKKSFSTAKVAGLSPLQSFLQLNKTLFNEEPNSPASINQNVIPQTQTHHLELCTNDMPEHDNIKCEPEDDTCSNSSDPDRLEIEDRDEQDTEGEENGYDMTINKRMKVETNYEESKTSTPNRSPVNRMDTPESNCSDTNIDQETTKLWQALANNRSLEITRTNGDKLNNGFTGEATNLLRSLINNRQIGITAVDSGRISPQIRFYRDTQGTTIERTVSDCSVLGNRTNVSCIENKGTSVDSNPSSPASIGRKETKCRRKQSYPSKAPMSPDVVNYQHESNEEQAQDFTAWSNKMKGKVEDQKQQFDQHSGNMAKKVDMSCTNCGTMTTTIWRRNMKGEMVCNACGLYYKLHGVNRPVTMRRDTIHTRRRRPKGEKPTRHRKKGDSILAPQSEQMDAESADMLAALRRQIQPHLMMAALTPPRIPGAHPPAPTAQLNYSLPLPSYMMHHVKAEGREQCHLSTEAEETEAGDEENVSDVPLNLVATSLSEEAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01538418;
- 90% Identity
- iTF_00862241;
- 80% Identity
- -