Basic Information

Insect: Bombus cullumanus
Gene Symbol: sens
Assembly: GCA_014737535.1
Location: JACXIX010000059.1:235746-262268[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 4.1e-05 0.19 11.8 0.6 14 39 261 283 254 290 0.80

2 4 0.055 2.5e+02 1.8 2.2 19 29 294 304 285 314 0.83

3 4 2.7e-06 0.012 15.6 2.0 3 41 307 341 305 343 0.86

4 4 0.017 81 3.4 0.0 18 38 349 366 346 372 0.75

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	4.1e-05	0.19	11.8	0.6	14	39	261	283	254	290	0.80
2	4	0.055	2.5e+02	1.8	2.2	19	29	294	304	285	314	0.83
3	4	2.7e-06	0.012	15.6	2.0	3	41	307	341	305	343	0.86
4	4	0.017	81	3.4	0.0	18	38	349	366	346	372	0.75

Sequence Information

Coding Sequence: ATGTGTGTTTTCACGGTTTGCTCGTCAGAAGCGGTGCCGCGTACTTGGTACATGAAACCGGAACTTCACTACAGCGCAATTGGAGTTCCGGCGGGCGCTCTGTCACCCCCGGCCACACTTTCACCGCCTAGCAGCCCTAGCGTCACGTTGCCGCCTTCGCCGTGGAGTCCTGGCGCGGCAGGAAGTAGCTTGAACACCGCGGCGACATCCTCCAATCCTTCTTCGGTTTCCTCCACGAGCCTCGGCCAGCCGACACCGGACCGTTTCAGTGCTTTCACCCTCGTCTCCACCTGCAATCCCGACGCCAGGCTTCAGAATCTACCACTGACCACCACAACCACGGCACGAGAGATGCGTTGTGGTCTGATGTATGGTGGTTATGGGTCGACCGGGGCTGCATGGTGGGCTGCTCAACACCAGTTGAGTCTCTTGCTGCCTCATTCCCTGTTGCCACCCTCGAGGATTTCTAACCAGCAAACTACACCAGTTGCGAATTGTTCACCAATTCATCCGAAACCCCTGAACACGTCCAGAGCTGGCTCGCCACGAAGATGCACCCCGGAGAAGGCGAAGTTCGAGGAGGAGGCGCCGCTAAACTTAAGTACCAAACCTAATGACGTTTCGTCCACCATGAACCGAAAGAGTGAAATTTGGTCACCAGGAACAGTCTGCGAGAGGGAAGCGAAAGAAACCAGGATACTATCATCCAGGAGTCCATCCTCGACACCTGTAATCACTCGACAAATCCATCATTCACCGTTGACACCGCCCTCCTCTTCGGAAAGGACATTCCAATGTAAACAATGTGGAAAAGCCTTCAAACGTTCAAGCACTCTCAGCACTCATCTTTTAATCCACTCTGACACCAGACCGTATCCCTGTCAATATTGTGGCAAGAGGTTTCACCAGAAATCAGACATGAAGAAGCACACTTACATTCATACCGGTGAGAAGCCGCATAAATGCGTGGTATGTGGCAAGGCGTTCTCCCAGAGCAGCAATCTGATCACGCACATGCGCAAGCACACGGGCTACAAACCGTTCCAGTGTGGTCTCTGCGACAAGGCGTTCCAGAGGAAGGTGGATCTACGACGACATCGAGAAGGACAGCATCCAGCCGCCCCGGCGCTCGATTATCGCTCCCTCCAACTACCCTCACAGCCCGCCAACATCAAACACTCTCCACCTCTACAACCTGCCCCCGGTTATCACATGATACCTGTCCCCGGTAATAGTTGA
Protein Sequence: MCVFTVCSSEAVPRTWYMKPELHYSAIGVPAGALSPPATLSPPSSPSVTLPPSPWSPGAAGSSLNTAATSSNPSSVSSTSLGQPTPDRFSAFTLVSTCNPDARLQNLPLTTTTTAREMRCGLMYGGYGSTGAAWWAAQHQLSLLLPHSLLPPSRISNQQTTPVANCSPIHPKPLNTSRAGSPRRCTPEKAKFEEEAPLNLSTKPNDVSSTMNRKSEIWSPGTVCEREAKETRILSSRSPSSTPVITRQIHHSPLTPPSSSERTFQCKQCGKAFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTYIHTGEKPHKCVVCGKAFSQSSNLITHMRKHTGYKPFQCGLCDKAFQRKVDLRRHREGQHPAAPALDYRSLQLPSQPANIKHSPPLQPAPGYHMIPVPGNS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00983788;
90% Identity: iTF_01067074;
80% Identity: iTF_00217949;