Bcon006039.1
Basic Information
- Insect
- Bombus confusus
- Gene Symbol
- SNAPC4
- Assembly
- GCA_014737475.1
- Location
- JACXIV010000015.1:276358-278958[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.16 1.4e+02 2.5 0.0 3 17 170 184 169 186 0.92 2 5 2.7e-12 2.3e-09 37.0 1.4 1 44 250 295 250 297 0.95 3 5 1.9e-07 0.00017 21.5 0.6 3 43 305 349 304 352 0.96 4 5 2.1e-13 1.8e-10 40.5 0.0 1 45 358 403 358 404 0.96 5 5 1.2e-11 1e-08 34.9 0.1 3 42 413 452 411 455 0.95
Sequence Information
- Coding Sequence
- ATGAACACGGTACTCAATGAAGGTGACAACAATGATGATCTAAATGAAATATTGTTGTTAGAAAGTATATTTCCCGAATGTAAATATGAACATCATTCTGAGAATAATTACAAAATAAATGATACCGAATTAACCGATAATTTAAAACAAGAATCTATTAAAGATCAACCAAGTGTACTACAAAATGAATGTCAAACCAAAGATGACTTTACGGAATGTAGTATCGAAAATTGTAATGGTATGTTAGATTGTAACAAACAGTTAATCTCTTCTTTAATGTATTTAAAAAGCAACATAACCCTTGCTCTTACAAAATGTCAAAGAAAATTAGCAGCGATAGAATATAGTTTAGAAAAAAATACAGCTGGAGATACAAAAATTTCAATCTGCAATGCTGGTATGCCTTATTTTAAGGACAAACATTATTTTTTTGCTTCCAATAATAAAGATGAAATATTGAAGGAAAGCTATAAAGAATTACAGCTCAAAAATCTTCCCAAAATTTCTGTATGGACGAAAAAGGAAAGAGATGTGCTTTTAAATGCGGTAAAATCAGAAGTTAAATTGGAAAAAGAATACAACGACAATAAAACGAAATCTTCATCTACAGATACTTTACAAACAGTCAATCCATTACGACAAAAAGAATTTGATTGGTTTAAAATATCATCTACTTATTTTGAAGATGTTCATTCTCCTTTTGATTGTCGTGTCATGTGGAATGTTTTTCTTCACCCTGACATCAACAGGAAGCGTTGGACAAAGTCAGAAATTATTAAACTCAGGAGAATAGTAAAAAAGTATAAATTTCAAAACTGGGACAAAATTGCCAAAGAATTAAATACAAATCGTAGTGCGTATCAATGTTTTATCAAATATAATACAAAAAAAAGATTACCTAAAGTCTATTGTACTTGGGAAAATGAAGAAGATAAAAGACTTTTGAAACTAATAGAAATATTTCAAATTGGTGACTTTATTCCTTGGGGCGATGTAACTAGTTGGATGCATAATAGAACTAAACAGCAAGTTTATTTTCGATGGACATACAGCTTAACACCATATTTGATTAAAGGCAGATTTACAGTTCAAGAAGACAATATTTTGAAAGATGCTGTTACTAAATATGGTACTAACTTTCGTAAAATATCAGCTGCATTAATGCCTAATAGATCTACTGTTCAACTTCATGATCGTTATAAAACGTTAACCGTTAACCAAATTCAACGTAAGGCTTCATGGTTGTTTGAAGAAGATATAAAGTTACTTAATCTGTTTGAGCGCATTGGTCCAAATTGGTCTTTAATAGCTAAAAAATTTTCGTGCAAAACTAGGACTCAAGTAAGACATAGATACACGGCTTTGCAAAAATACATTAAGAAAGATATTTCTATACTTCATCTGCATAAATATAACTTTCACAATAGAATACATTTAGTAAATGAAAAGAAGGAACAAAAGAAACCTCATAATAAAATTACCAATGAAGATTATGATGATAATGTTAAGAACATAGATCAAGAATTAATTGAGTACTTTCATAAAAAATGTAAAGAAGAACAACTGATATATAGGCAGAAACATCATAATGTGGAAAAGTTGGAATGTAATGCAATAAGCTTATATAATACTTTACATGCATTGAATGCCAAACTCTGTATACCCAACACCATTAATGATAGAAAATTAAATAATAGTGATCAACAGCTTTTGCATTTATTAAAGGAATATATGGAAATGAAAAATGATAAGAAAAAGTACATTCAAATTATAGAGAATTATAAATCACGCATGTTTAAACAGGATGAGTCTGAACAAGATTCTCGTTTTATACCTCCACCTCCTTTTGAATCGAAAATAAAAAATAAATTAAAATATAAATTAAATAATTGTATCGATTATAATTTAGATAAAAGCAATAAATTTTTACTCAAAGTACCTACAGACTTTAATACAATTGTTTACATCGGTGGTGGTGAACAAGAATTGCAATTTCAAAAATTTGCATGTTCCCTCCAAGTTAACAATTCAAAATGCTGTGAATCAGCCCCTGAAACTCGAAACAGTCCTTCATTTTTAATAGAACTACTATTACAACGTCGATGTCGTACCAATAATAGCAACGATAGAAACAATTCAACTGACGAACCATTAAAAAAATTGGAATCAGTCGTTCGTTTCGACATTGGCACCGCTGCATCTCATGAAAATGACGATGATCACAATTCTCAGCATGAGAAGTTTCCAAGCAAATGTCAAAACAAAGTATTATTTAATAACGTTGAAGAGGGATACCCATCATCTAACTGTAGCACAGGACTGTATGCTAGCCATGCAACTTTGATAAGTTTTAGAAACTTGATGTATTTGAAACGATTAAATGAAAAGTATCGTAACCTTAATGAATATTTTACACCATCAAACGAATTACAAAAACCATTTAATCTATTAGAAACACGTTTAGAAAAATTATTTAAGTACCCATTAGGTCTGTCAAAAATCTCATTGCCACAAGTTTATGTAGAGGATACATTGTTCAGTGATATTCCACCGACAAAAAATGTTTCAAATACATTAGTGAAACAAAAAACAAAGAAGTAA
- Protein Sequence
- MNTVLNEGDNNDDLNEILLLESIFPECKYEHHSENNYKINDTELTDNLKQESIKDQPSVLQNECQTKDDFTECSIENCNGMLDCNKQLISSLMYLKSNITLALTKCQRKLAAIEYSLEKNTAGDTKISICNAGMPYFKDKHYFFASNNKDEILKESYKELQLKNLPKISVWTKKERDVLLNAVKSEVKLEKEYNDNKTKSSSTDTLQTVNPLRQKEFDWFKISSTYFEDVHSPFDCRVMWNVFLHPDINRKRWTKSEIIKLRRIVKKYKFQNWDKIAKELNTNRSAYQCFIKYNTKKRLPKVYCTWENEEDKRLLKLIEIFQIGDFIPWGDVTSWMHNRTKQQVYFRWTYSLTPYLIKGRFTVQEDNILKDAVTKYGTNFRKISAALMPNRSTVQLHDRYKTLTVNQIQRKASWLFEEDIKLLNLFERIGPNWSLIAKKFSCKTRTQVRHRYTALQKYIKKDISILHLHKYNFHNRIHLVNEKKEQKKPHNKITNEDYDDNVKNIDQELIEYFHKKCKEEQLIYRQKHHNVEKLECNAISLYNTLHALNAKLCIPNTINDRKLNNSDQQLLHLLKEYMEMKNDKKKYIQIIENYKSRMFKQDESEQDSRFIPPPPFESKIKNKLKYKLNNCIDYNLDKSNKFLLKVPTDFNTIVYIGGGEQELQFQKFACSLQVNNSKCCESAPETRNSPSFLIELLLQRRCRTNNSNDRNNSTDEPLKKLESVVRFDIGTAASHENDDDHNSQHEKFPSKCQNKVLFNNVEEGYPSSNCSTGLYASHATLISFRNLMYLKRLNEKYRNLNEYFTPSNELQKPFNLLETRLEKLFKYPLGLSKISLPQVYVEDTLFSDIPPTKNVSNTLVKQKTKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -