Bcam006190.1
Basic Information
- Insect
- Bombus campestris
- Gene Symbol
- SNAPC4
- Assembly
- GCA_905333015.1
- Location
- HG995128.1:1418021-1420606[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.08 70 3.5 0.2 3 18 168 183 167 189 0.93 2 5 2e-12 1.7e-09 37.5 2.1 1 45 248 294 248 295 0.96 3 5 6.5e-08 5.7e-05 23.0 0.4 4 42 304 346 302 350 0.97 4 5 4e-13 3.5e-10 39.7 0.0 1 45 356 401 356 402 0.97 5 5 1e-10 9e-08 32.0 0.1 3 42 411 450 410 453 0.97
Sequence Information
- Coding Sequence
- ATGAACACGATGCTCAACGAAGGTGATGAAAATAATGATCTAGTCGAGATGTTGTTAGAAAGTATATTTCCCGAATGTAAAGATGGAAATCATTTTGAGgataattacgaaataaatgatattgaATTAATTGATAACTTAAAACAAGAATCTATTGAAGATCGAATAAGTGTACAAAAAGAATATCAAACCAAAGATGACTTTACGGAATGTAGTATCGAAAATTGCTATGATAtgttaaattataacaaacaGATAATCTCTTCTTTAATGGATTTAAAAAGCAACATAATTCTAGCTCTTACAAAATGTCAAAAAAAATTAGCAGTGATAGaatgtaatttaaacaaaaatatagctaaagatacaaaaatttcaatttgcaaTGCTGGTATGCCTTATTTTAAggataaacattatttttttgcTTCCAATAACGAAGATGAAATATTGAAGGAAAGCTATAAAGAGTTACAGCTCAAAAATCTTCCCAAAATTTCTACATGgactaaaaaggaaagagatgTACTTTTAGATGCGGTAAAAGAAGAAGCTAAAGGGGAAAAGGAATGCAAAGacgggaaaaagaaattttcatctataaacattttacaaacAGTCAATCCATtacaacaaaaagaatttgattGGTTTAAAATATCATCTAATTATTTTGAAGATGTCCATTCTCCGTTTGATTGTCGTATCATGTGGAATGTTTTTCTTCACCCTGACATCAACAGGAAGCATTGGACGAAGTCAGAAATTACTAAACTCAGGAGAATAGTAAAAAAGTATAAACTTCAAAACTGGGACAAAATTGCCGAAGAATTGAATACAAATCGTAGTGCGTATCAATGTCTTATCAGATATAATACAAGAAAAAGATTACCTAAAGTCCATTGCATTTGggaaaatgaagaagataAAAGACTTTTGAAACtagtagaaatatttcaaattggTGACTTTATTCCTTGGGGCAGTGTAACTAGTTGGATGCAAAATAGAACTAAGCAGCAAGTTTATTTTCGATGGTCATACAGCTTATCACCATATTTAACTAAGGGCAGATTTACTAAAACTGAGGACAATATCTTGAAAGATGCTGTTACTAAATATGGTACTAACTTTCGTAAAATATCAGCTGCATTAATGCCTAATAGATCTACCATTCAACTTCATGATCGTTATCAAACGTTAACCATTAACCAAATTGAAAGTTGGACTTCGTGGACGCTTGAAGAAGATACAAAGTTACTTCATCTTTTTCAGTACATTGGTCCAAATTGGTCTGTAATAGCTAAACAATTTTCATGCAAAACTAGGACTCAATTAAGACATAGATACACAGCTTTGCAAAAATACATTAAGAGAGGTGTTTCCATACTTGAACTGCATAAATATCACTTACACAACAGAGTACAACATtcagaaaatgaaaacaaggaacaaaaaaagaaagaattttgtaaaaatatcttcaaacCTAATAATAGTATTATCAATGAAGAtcatgataataatattacgaaTATAGATCAAGAATTAATTGactattttcataaaaaatataaagcagAACAGTTGAAACATAGGCGAGAACTACATAACGTGGAAAAGTTGGAATGTAATACAATAAgcttgtataatattttacaagcaTTGAATGCCAAACTTTGTATATCCAACAAcattattgataaaaaattaaacaatagaGATCAACAGCTTTTGCATTCATTAAgggaatatataaaattaaaaagcgaTAAGAAAAAGTACTTTCAAATTGTAGAGGAGTATAAATCACGCATGTTTAAACACAATGAGTCTGAACAAGATTCTTGTTTTTTACCTCCACATCCTTTTGATTCGCagataaaattgaagaaattaaagaaatgtatCGATTATGATATAGATAGAAgcaataaatttgtatttgaaCTACCTACAGACTTTAATACATCAGAGCTTATAATTCCTTACATCGGTGGTGATGAACAAGaattacaatttcaaaaatttgctCGTTCCTTTCAAGTTAATAATTCACAATGCTGTGAATCAACCTTTGAAGCTCGAAACTGttctacatttttaacaaaattactaTTACAATGTCGTACCAATAATAGCAACGATAGAAACAATTCAACTgacaaaacattaaaaaaattggaatCAGTCGTTCATTTCAACATTGGCACCGCTGCATCTCATGAAAATGACAATGGTTACAAATCTCAGCATGTGGAATTTCAAAACAAATGTCTATCTAACTGTACCacagaaatttctcaaaacCATGATATATCTATGATGTATGCTAGCTATGCAACTTTGATAAGTTTTAAAAACTTGACATATTTGAAACGATTAAATGAAAAGTACAGTAttcttgataaatattttataccatCAAACGAATTACAAAAAgcatttaatttattagaaacacgtttagaacaattatttaagTACCCATTAGGtctgtcaaatattttattgccaCAAGTTTATGTAGAGGATACATCTTTGTTCGAAGATATTCCACCGAAAAAGAGACGTCTCAAATATTAG
- Protein Sequence
- MNTMLNEGDENNDLVEMLLESIFPECKDGNHFEDNYEINDIELIDNLKQESIEDRISVQKEYQTKDDFTECSIENCYDMLNYNKQIISSLMDLKSNIILALTKCQKKLAVIECNLNKNIAKDTKISICNAGMPYFKDKHYFFASNNEDEILKESYKELQLKNLPKISTWTKKERDVLLDAVKEEAKGEKECKDGKKKFSSINILQTVNPLQQKEFDWFKISSNYFEDVHSPFDCRIMWNVFLHPDINRKHWTKSEITKLRRIVKKYKLQNWDKIAEELNTNRSAYQCLIRYNTRKRLPKVHCIWENEEDKRLLKLVEIFQIGDFIPWGSVTSWMQNRTKQQVYFRWSYSLSPYLTKGRFTKTEDNILKDAVTKYGTNFRKISAALMPNRSTIQLHDRYQTLTINQIESWTSWTLEEDTKLLHLFQYIGPNWSVIAKQFSCKTRTQLRHRYTALQKYIKRGVSILELHKYHLHNRVQHSENENKEQKKKEFCKNIFKPNNSIINEDHDNNITNIDQELIDYFHKKYKAEQLKHRRELHNVEKLECNTISLYNILQALNAKLCISNNIIDKKLNNRDQQLLHSLREYIKLKSDKKKYFQIVEEYKSRMFKHNESEQDSCFLPPHPFDSQIKLKKLKKCIDYDIDRSNKFVFELPTDFNTSELIIPYIGGDEQELQFQKFARSFQVNNSQCCESTFEARNCSTFLTKLLLQCRTNNSNDRNNSTDKTLKKLESVVHFNIGTAASHENDNGYKSQHVEFQNKCLSNCTTEISQNHDISMMYASYATLISFKNLTYLKRLNEKYSILDKYFIPSNELQKAFNLLETRLEQLFKYPLGLSNILLPQVYVEDTSLFEDIPPKKRRLKY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00219036;
- 90% Identity
- iTF_00219720;
- 80% Identity
- -