Basic Information

Gene Symbol
kn
Assembly
GCA_905333015.1
Location
HG995142.1:4255801-4265920[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5e-144 2.8e-140 468.3 6.7 182 564 38 416 28 427 0.86

Sequence Information

Coding Sequence
ATGCAATATTCAGACTTACTTTCCAGCCAAGTTCGCGTTCTAATTAAGTTCTCGGCGTCGAAGAGCGTTAAGCACCTTGTCAACCGTTTAACTCCGGTCCCCTCTGCTTTCAGATTCTTCCTCAAGTTCTTCCTCAAGTGCAACCAGAACTGCCTTAAGAATGCCGGCAATCCACGTGATATGAGACGCTTCCAAGTGGTCATTTCCACGCAAGTAGGAGTAGAGGGACCGCTACTGGCCGTCTCGGACAACATGTTCGTCCACAACAACAGCAAACACGGACGTAGAACGAAACGATTGGATCCCAGTGATCCTGGTGAATACAACAGTCTCTATACGCCTGTACCTCTTCAAACACCGTGCATAAAAGCGATATCACCAAACGAGGGCTGGACATCTGGTGGATCCACGGTAATAATCATTGGAGAGAATTTCTTCGACGGACTTCAAGTCGTTTTTGGGTCGATGTTGGTTTGGAGTGagcTAATTACACCAAATGCAATTAGAGTACAAACTCCACCACGACAGATACCAGGCGTCGTTGAAGTTACGTTATCCTACAAAACTAAACAATTCTGTAAAGGAGCACCTGGTAGATTTGTTTATGTTTcATTAAACGAACCCACGATCGATTACGGCTTCCAGAGGTTACAGAAACTTATTCCACGACATCCAGGAGATCCTGAAAAATTACCAAAAgaaatcatattaaaaagGGCGGCGGATCTTGCAGAAGCCTTATACAGTATGCCGAGAAGCGGGAACGCTGGAATTACGGGAGCACCTAGAAGTCCAGGATCGGGTCATCCACCTGCACCACCAACATCTAGTTCGGCAACAGCGTTCAACTCGTACACAGGACAACTTGCAGTGACGGTACAGGAAAACGGTAGCGCGGCGAAATGGACAGACGACGGTAGTTCCGTGACGACAGGAGCCGGTGCTGCAGGCGgaggcggcggtggtggtagCGTCGGAGGAAGCGTCGGTGGTAGCGCCGACGCCTATAGGCAAAGCAGTAGCGCGAGTCCACGTGGAGTCGTGACCGGTGGTGGTTATTGCGGAAGTTCGGCTAGCACACCTCACAGTCACAGCACAAACGGAAGTTACTCGGTAGCCAATCCGTACACTGGTAGCCCTACTCTTTATACGTCGCCGCACGAACAGTATGGCATTTTCTATACGTCCGGGGATGGGAGTGCGTTCGCCCCCGTAGTACGACCACCGACCACCTCAGTCCCACCGCACTGGTCCACACAGCACCACCTCGCCACAGCCGCCCAGTAA
Protein Sequence
MQYSDLLSSQVRVLIKFSASKSVKHLVNRLTPVPSAFRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVGVEGPLLAVSDNMFVHNNSKHGRRTKRLDPSDPGEYNSLYTPVPLQTPCIKAISPNEGWTSGGSTVIIIGENFFDGLQVVFGSMLVWSELITPNAIRVQTPPRQIPGVVEVTLSYKTKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRSGNAGITGAPRSPGSGHPPAPPTSSSATAFNSYTGQLAVTVQENGSAAKWTDDGSSVTTGAGAAGGGGGGGSVGGSVGGSADAYRQSSSASPRGVVTGGGYCGSSASTPHSHSTNGSYSVANPYTGSPTLYTSPHEQYGIFYTSGDGSAFAPVVRPPTTSVPPHWSTQHHLATAAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01070145;
90% Identity
iTF_00360699;
80% Identity
iTF_00224351;