Bbre012879.1
Basic Information
- Insect
- Bombus breviceps
- Gene Symbol
- SNAPC4
- Assembly
- GCA_014825925.1
- Location
- CM026182.1:11191625-11194216[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.054 47 4.0 0.2 3 18 169 184 167 185 0.92 2 5 2.4e-12 2.1e-09 37.1 2.4 1 45 249 295 249 296 0.95 3 5 3.9e-08 3.4e-05 23.7 0.6 3 42 304 347 302 351 0.96 4 5 3.8e-13 3.4e-10 39.7 0.0 1 45 357 402 357 403 0.97 5 5 6.1e-12 5.3e-09 35.9 0.1 3 42 412 451 411 454 0.97
Sequence Information
- Coding Sequence
- ATGAACACGGTATTCAACGAAAGTgatgaaaataatgatttaGTCGAAATGTTGTTAGAAAGTATATTTCCCGAATGTGaagatggaaataattttgagaatgattacgaaataaacgatatcGAATTAAGTGATAACGTAAAACAAGAATGTATTAAAGATCGAATAAGTGTACTACAAAATGAGTGTCAAACCAAAGATGACTTTACGGAATGTAGTATCGAAAATTGCTATGATATGTTAGAGCATAACAAACAGATAATCTCTTTTTTAATGGATTTAAAAAGCAACATAACCGTTGCTCTTACAAAATGTCAAAAAAAATTAGCAGTGATagaatgtaatttacaaaacaatatagctaaagatacaaaaatttcaatttgcaatGCTGGTATGCCTTATTTTAAggataaacattatttttttgctTCCAATAACgaagatgaaatattgaaGGAAAGCTATAAAGAATTACAGCTCAAAAATCTTCCCAAAATTTCTGCATGGactaaaaaggaaagagatgTGCTTTTAGATGCGGTAAAAGAAGAagttgaaagagaaaaagaatgcaacgacaggaaaaagaaatttccatctacagatattttacaaacagTCAATCCATTACaacaaaaagaatttgatTGGTTTAAAATATCATCTAATTATTTTGAAGATGTCCATTCTCCGTTTGATTGTCGCATCATGTGGAATGTTTTTCTACGCCCTGACATCAACAGGAAGCATTGGACGAAGTCAGAAATTACTAAACTCAGGAGAATAGTAAAAAAGTACGAACATCAAAACTGGGACAAAATTGCCGaagaattaaatacaaatcgTAGTGCATATCAATGTCTTATCAGATATAATACAAGAAAAGGATTACCTAAAGTCCATTGCAGTTgggaaaatgaagaagataaaagacTTTTGAAACtagtagaaatatttcaaattggTGACTTTATTCCTTGGGGCAATGTAACAAGTTGGATGCAAAATAGAACTAAGCAGCAAGTTTATTTTCGATGGTCATACAGCTTATCACCATATTTAACTAAAGGCAGATTTACTAAAACTGAAGACAATATCTTGAAAGATGCTGTTACTAAATATGGTActaattttcgtaaaatatcagCTGCATTAATGCCTAATAGATCTACCATTCAGCTTCATGATCGTTACCAAACGTTAACTATTAACCAAATTGAAAGTTGGACTTCATGGACGCttgaagaagataaaaatttacttcATCTTTTTCAGCGCATTGGTCCAAATTGGTCTGTAATAGCTAAAAAATTTTCATGCAAAACTAGGACTCAATTAAGACATAGATACACAGCTTTGCAAAAATACATTAAGAGAGGTGTTTCCGTACTTGAACTGCATAAATGTCACTTACATAATGGAATACAACATtcagaaaatgaaaacaaggaacaaaaaaagaaggaattttgtaaaaatatcttcaaacCTAATAATAGTATTACCAATGAAGAtcatgataataatattacgaatataGATCAAGAATTAATTGACTATTTTCATAGAAGATGTAAAGCAGAACGATTGAAGTGGGAACTTCATAATGTGGAAAAGTTGGAATGTAAAACAATAagcttatataatattttacaagcaTTGAATGCCAAACTCTGTATATCCAACAAcattattgataaaaaattaagcaATAAAGATCAACAGCTTTTGCATTCATTAAGggaatatataaaactaaaaagcGATAAGAAGAAGTACTTTCAAATTGTAGAGGAGTATGAATCACGCATGTTTAAACGCAATAAGTCTGAACAAGATTCTTGTTTTTTACCTCCACGTCCTTTTGATTCGCAGATAAAATTGAGGAAATCAAAGAAATGTATCGATTATGATATAGATAGAAgcaataaatttgtattcgaACTACCTACAGATTTTAATACATCAGAGCTTATAATTCCTTACATCGGTGGTGATGAACaagaattacaatttcaaaaatttgccCGTTCCTTTCaagttaataattcaaaatgcTGTGAATCAGCCTTTGAAGCTCGAAActgttctacatttttaacaaaattactatTACAACGTCGTTGTCGCACCAATAATAGCAAcgatagaaacaattcaactgacaaaacattaaaaaaattggaatcaGTCGTTCGTTTCGACATTGGCACCGCTGCATCTCATGAAAATGACGATGTCAATTACAAATCTCAGCATATGGAGTTTCAAAGCAAATGTCTATCTAACGATACCGCAGAAATTACTCAAAACCATGACACATCTGTTATGTGTGCTAGCTATGCAACTTTGATAAGTTTTAAAAACTTGACatatttgaaacaattaaatgaaaagtataGTATTCGTGATGAATATCTTATAACATCGAACAAATTACAAGAagcatttaatttattagaaacacgtttagaacaattatttaagtacCCATTAGGTCtttcaaatatcttattaCCACAAGTTTATGTAGAGGATACATTTTTGTTCGAAGATATTCCACCGAAAAAGAGACGTCTCAAATATTAG
- Protein Sequence
- MNTVFNESDENNDLVEMLLESIFPECEDGNNFENDYEINDIELSDNVKQECIKDRISVLQNECQTKDDFTECSIENCYDMLEHNKQIISFLMDLKSNITVALTKCQKKLAVIECNLQNNIAKDTKISICNAGMPYFKDKHYFFASNNEDEILKESYKELQLKNLPKISAWTKKERDVLLDAVKEEVEREKECNDRKKKFPSTDILQTVNPLQQKEFDWFKISSNYFEDVHSPFDCRIMWNVFLRPDINRKHWTKSEITKLRRIVKKYEHQNWDKIAEELNTNRSAYQCLIRYNTRKGLPKVHCSWENEEDKRLLKLVEIFQIGDFIPWGNVTSWMQNRTKQQVYFRWSYSLSPYLTKGRFTKTEDNILKDAVTKYGTNFRKISAALMPNRSTIQLHDRYQTLTINQIESWTSWTLEEDKNLLHLFQRIGPNWSVIAKKFSCKTRTQLRHRYTALQKYIKRGVSVLELHKCHLHNGIQHSENENKEQKKKEFCKNIFKPNNSITNEDHDNNITNIDQELIDYFHRRCKAERLKWELHNVEKLECKTISLYNILQALNAKLCISNNIIDKKLSNKDQQLLHSLREYIKLKSDKKKYFQIVEEYESRMFKRNKSEQDSCFLPPRPFDSQIKLRKSKKCIDYDIDRSNKFVFELPTDFNTSELIIPYIGGDEQELQFQKFARSFQVNNSKCCESAFEARNCSTFLTKLLLQRRCRTNNSNDRNNSTDKTLKKLESVVRFDIGTAASHENDDVNYKSQHMEFQSKCLSNDTAEITQNHDTSVMCASYATLISFKNLTYLKQLNEKYSIRDEYLITSNKLQEAFNLLETRLEQLFKYPLGLSNILLPQVYVEDTFLFEDIPPKKRRLKY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00219036;
- 90% Identity
- iTF_00219720;
- 80% Identity
- -