Basic Information

Insect: Boloria selene
Gene Symbol: stc
Assembly: GCA_905231865.2
Location: HG993141.1:3335675-3350333[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2 2.8e+04 -4.3 1.6 15 19 490 494 489 494 0.81

2 14 0.047 6.7e+02 1.1 1.4 2 10 522 530 522 530 0.92

3 14 3.6e-05 0.5 11.1 18.1 4 19 538 553 536 553 0.93

4 14 4.1e-08 0.00057 20.5 13.9 1 19 589 607 589 607 0.97

5 14 2.2e-05 0.31 11.8 15.5 1 19 648 666 648 666 0.99

6 14 9.8e-06 0.14 12.9 11.2 1 19 694 716 694 716 0.88

7 14 2 2.8e+04 -4.7 1.7 6 10 746 750 746 750 0.95

8 14 0.015 2.1e+02 2.7 7.3 1 11 756 766 756 767 0.93

9 14 0.056 7.9e+02 0.8 0.6 4 10 771 777 770 777 0.92

10 14 6.5e-06 0.092 13.4 13.5 3 19 785 801 783 801 0.92

11 14 0.00038 5.4 7.8 8.9 9 18 847 856 845 857 0.92

12 14 1.3 1.9e+04 -3.6 1.3 8 13 862 867 861 868 0.79

13 14 4.3e-08 0.00061 20.4 14.2 1 17 893 911 893 917 0.83

14 14 0.015 2.1e+02 2.7 13.6 1 19 923 946 923 946 0.88

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2	2.8e+04	-4.3	1.6	15	19	490	494	489	494	0.81
2	14	0.047	6.7e+02	1.1	1.4	2	10	522	530	522	530	0.92
3	14	3.6e-05	0.5	11.1	18.1	4	19	538	553	536	553	0.93
4	14	4.1e-08	0.00057	20.5	13.9	1	19	589	607	589	607	0.97
5	14	2.2e-05	0.31	11.8	15.5	1	19	648	666	648	666	0.99
6	14	9.8e-06	0.14	12.9	11.2	1	19	694	716	694	716	0.88
7	14	2	2.8e+04	-4.7	1.7	6	10	746	750	746	750	0.95
8	14	0.015	2.1e+02	2.7	7.3	1	11	756	766	756	767	0.93
9	14	0.056	7.9e+02	0.8	0.6	4	10	771	777	770	777	0.92
10	14	6.5e-06	0.092	13.4	13.5	3	19	785	801	783	801	0.92
11	14	0.00038	5.4	7.8	8.9	9	18	847	856	845	857	0.92
12	14	1.3	1.9e+04	-3.6	1.3	8	13	862	867	861	868	0.79
13	14	4.3e-08	0.00061	20.4	14.2	1	17	893	911	893	917	0.83
14	14	0.015	2.1e+02	2.7	13.6	1	19	923	946	923	946	0.88

Sequence Information

Coding Sequence: ATGTCTCAGTGGAATAATTCTTACAATTACAATAATCAATATCAGGCACCTAATAATTGGAATGGTGATTACAATAATCAATATGTAAATCAAGCTTACTATACTAATCCAAATAGACAATATGACACTAGCAATCAATATGTTAGTTTTGATGATTTTTTATCTCAAATGCACATTTCAAATGTTCCTCAAACAAATCCTGCAAACTTCAATAATATGCAATATCAGAATTATCCCAACACTCAGTATAATAATGTACCTAATTATCAAAATGGTTCTACAAGCCATAATTCTCAAACAGAATATATGTATAGATCTGACATTGCCAGTTATTCTAATAATGGAGAATCTTATCAAAGAAACATGCAAAATCAATATAACCCAGTGACCTCAGACCAAAATAATTATACAAATGAAATGGTTTTTAAATCAAAATTAACACCAACAGCTACTGAATTTGTTCCTAAAAACTCAAAGGAAAAACCAGTTAGTAATTCTAACAGTGAATTAGCTCAAGAACCAAGCTCATCAAACACAGCAGTAAGTGAATCATCTAGTAATTACTCAAAACCATCTACTTCAACTAATTGGAGGGAAAGACCTCAAAGTTATCATCAGGGCAACAGTTCAACATCTGCAGAGACTAACTCATTCCACAAAACCTCTATAAATCATGATACTAATAATAGGAATATGAAATTTGAATCAAGAAATCGTAATCAAGAAAATCAGAATAGTCATACTGAACCTACTAGTAACAGTTCAAAAAGTAAAGACTCTTCAAGCCGTCCTAATGAATTTAATTCTCGTAACAGAAAATTTAAAAACCGATTTCCTGAAAATAACCATGATGCAAATTATCGGAACCAAGATCATCAAGAATTCACTAACAATCATAGATCAAATCGAAATAATGATCTGGAAACCTATAACCAAGATAGTAGAAGTTATCAGGATGATTCAAATTTTGTGCATGATAATAATAACTATGAAGGGGGCCAATCAAAACATTCAAAGGCTAAAAATAAAGAGTCTGATGTAGGACGCACTTTTTACAATAGCGCAATGCCTAAGGAAAGTCAAGATGTAAGAAACGGGAGAGAGGGTTCTGGAAAAAATCGTAAATGGGCTGGTAGTCAAAGGTTGAAAGCTGCAGAACGTAATTATGTTGAAGATGAGCAGTATGCTAGTTCATATGTAGTCAATAGAGAGGAAAAAAAGGATAATGTACCAAGCCCAATGAAAGCTAGGAATAAATCAGTTGTTAGTACAGGAGCAAACATAGAAATGACACAGAGGGAACGTCTCAGTGAACAGCTAGATAAAGGGACACTTGAATGCCTGGTATGCTGTGAGAGGGTAAAGCAGATAGACCCAGTGTGGTACTGTGGCAATTGCTACCATGTATTCCATCTCCGCTGCATTAGAAAATGGGCTATGAGCAGTATGGTTGAAAGCAAATGGCGGTGTCCAGCCTGTCAGAACACAAATCAGGATATTCCTACCGAATACAGATGTATGTGTGGAGCGGTGCGCAATCCAGAGTATCAACGAGGATCCAGTGGTGCCCACACATGTGGCAAAGCCTGTAAAAGACCCAGAAACTGTCCTCATCCTTGTACTTTGCTTTGTCACCCTGGACCTTGTCCACCATGTCAAGCTACAATTAGCAAGCAATGTGGGTGTGGTGTTGAGACCCGCTCAGTGCTCTGCAGTAGCAAGCTGCCCCAAGTGTGTGGACGGCAGTGCAGCCGCCAGCTCGAATGTGGCGTGCATTCCTGCTCTAAGGACTGTCATGAAGGACCCTGTGACCCTTGCACGGAGACTGTTACTCAAATCTGCCACTGCCCCGCCGCGAGCGCCCGCACCGTAGCGTGCACAGCCAGCACGGGTGGTACTCTCGCGTGGGCGTGCGGCGCGGCGTGCGGGCGCGTACTGACGTGCGGCGCGCACGTGTGCCGCGCCCCCTGCCACGCGCCACCCTGCCCGCCATGCCCGCTGCTGCCGGACAATGACCAACGTAAATCTTGTACGGACCCGATACCGTTGTGTGGCAACATCTGCGCCAAGCCTCTACCCTGTGGGCCTTCGGGTGATAAACATTTCTGTAAAGAGAGCTGTCATGAAGGTAGTTGTCGAGTATGCCCTGACACCACGCTGCTTCAGTGCCGCTGCGGACACTCCAGCCGCGAGGTGCCCTGTGCAGACCTGCCGCAGATGTACAATAATGTGCTGTGTCAGAGGAAGTGTAACAAGAAGCTGTCGTGCGGGCGCCACCGCTGCCGCACGGCGTGCTGCGCGGCCGCGTCGCACCGCTGCGCCGTGGTGTGCGCGCGCTCGCTGCCCTGCCAGCTGCACCGCTGCGAGGACTTCTGCCACACCGGCCACTGCGCGCCCTGTCCGCGCGTCAGCTTCGATGAGCTGCGGTGCGAGTGCGGGCGCGAGGTGGTGCTGCCGCCGGTGCGGTGCGGCACGAAGCCGCCGCCGTGCGCCGCGCCGTGCCGCCGCCGCCGCGCGTGCGCGCACCCGCCACACCACGCGTGCCACGCCGGCGACTGCCCGCCCTGCGTCGTGCTCACCACCAAGCGCTGCCACGGCGGACACGAGGAACGTAAAACAATCCCGTGCTCACAAGAGGAGTTTTCCTGCGGACTGCCGTGCGGTAAGCCGCTGCCTTGCGGGAAGCACACCTGCATCAAGACCTGTCATAAGGGCCCTTGTGATACTGGCAAATGCACGCAGCCGTGCACGGAGAAGCGCGCGCAGTGCGGGCACCCGTGCGCGGCGCCGTGCCACGCGCGCGGTGGCGGCGCCTGCCCCGCGCCCGCGCCCTGCCGCCGCGCCAAAAAGTATGTACAATATTTGTTATTTTTAATTAACAGAATGATGAGCACATTAGCGGCTTCAAAGATGCAAGAAGGTGGTACTGTCGACTTATCTGACCCTCAACGTCCTGGCAACATGTTGAAAACATTAGAATGCGATGAAGAATGCCTAGTAGAAGCGCGGTCGCGTCGCCTAGCCCTAGCTCTCCAGATCCGCAACCCGGACGTGTCCGCGAAGCTGGCGCCGCGCTACAGCGAGCACGTGCGCACGACCGCCGCTCGCGAGCCCGCTTTCGCCCAGCACGTGCACGACCGCCTGACCGAGCTAGTGCAGCTCGCTAAGAAGTCGAAACAAAAGACTCGATCGCATTCCTTCCCGTCAATGAATAGACAGAAGAGGCAGTTCATACACGAGATGTGCGAGCACTTTGGCTGCGAGAGTGTGGCGTACGACGCAGAGCCCAATAGAAACGTAGTAGCTACTGCTGATAAAGAAAAGTCGTGGCTGCCGGCGATGAGCGTGCTGGAGGTGCTGGCGCGCGAGGCGGGCAAGCGCCGCGTGCCGGGGCCCGTGCTGCGCGCGCCGCCGCCCGCCGCCGCCTCCTCGCAGAAATCATCCGGAGGCTGGGCCACATTGACGTCGACTAACGCGTGGGCGGCGCGCAACGCTCGCAAGGAGGAACCTAAGATCGACTACTTCGACAACCCGCCCGATAACTGA
Protein Sequence: MSQWNNSYNYNNQYQAPNNWNGDYNNQYVNQAYYTNPNRQYDTSNQYVSFDDFLSQMHISNVPQTNPANFNNMQYQNYPNTQYNNVPNYQNGSTSHNSQTEYMYRSDIASYSNNGESYQRNMQNQYNPVTSDQNNYTNEMVFKSKLTPTATEFVPKNSKEKPVSNSNSELAQEPSSSNTAVSESSSNYSKPSTSTNWRERPQSYHQGNSSTSAETNSFHKTSINHDTNNRNMKFESRNRNQENQNSHTEPTSNSSKSKDSSSRPNEFNSRNRKFKNRFPENNHDANYRNQDHQEFTNNHRSNRNNDLETYNQDSRSYQDDSNFVHDNNNYEGGQSKHSKAKNKESDVGRTFYNSAMPKESQDVRNGREGSGKNRKWAGSQRLKAAERNYVEDEQYASSYVVNREEKKDNVPSPMKARNKSVVSTGANIEMTQRERLSEQLDKGTLECLVCCERVKQIDPVWYCGNCYHVFHLRCIRKWAMSSMVESKWRCPACQNTNQDIPTEYRCMCGAVRNPEYQRGSSGAHTCGKACKRPRNCPHPCTLLCHPGPCPPCQATISKQCGCGVETRSVLCSSKLPQVCGRQCSRQLECGVHSCSKDCHEGPCDPCTETVTQICHCPAASARTVACTASTGGTLAWACGAACGRVLTCGAHVCRAPCHAPPCPPCPLLPDNDQRKSCTDPIPLCGNICAKPLPCGPSGDKHFCKESCHEGSCRVCPDTTLLQCRCGHSSREVPCADLPQMYNNVLCQRKCNKKLSCGRHRCRTACCAAASHRCAVVCARSLPCQLHRCEDFCHTGHCAPCPRVSFDELRCECGREVVLPPVRCGTKPPPCAAPCRRRRACAHPPHHACHAGDCPPCVVLTTKRCHGGHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCIKTCHKGPCDTGKCTQPCTEKRAQCGHPCAAPCHARGGGACPAPAPCRRAKKYVQYLLFLINRMMSTLAASKMQEGGTVDLSDPQRPGNMLKTLECDEECLVEARSRRLALALQIRNPDVSAKLAPRYSEHVRTTAAREPAFAQHVHDRLTELVQLAKKSKQKTRSHSFPSMNRQKRQFIHEMCEHFGCESVAYDAEPNRNVVATADKEKSWLPAMSVLEVLAREAGKRRVPGPVLRAPPPAAASSQKSSGGWATLTSTNAWAARNARKEEPKIDYFDNPPDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00213096;
90% Identity: iTF_00213096;
80% Identity: -