Basic Information

Insect: Boloria selene
Gene Symbol: -
Assembly: GCA_905231865.2
Location: HG993159.1:1666390-1667520[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.1 9.8 7.5 0.3 2 23 41 63 40 63 0.92

2 8 0.00011 0.01 16.9 2.1 1 23 158 181 158 181 0.95

3 8 0.038 3.5 8.9 0.2 3 20 188 205 187 207 0.91

4 8 0.029 2.7 9.3 1.1 3 23 216 237 214 237 0.94

5 8 9e-05 0.0084 17.1 0.3 1 23 244 267 244 267 0.96

6 8 0.006 0.56 11.4 1.5 1 23 272 294 272 294 0.95

7 8 1.8e-06 0.00017 22.5 0.2 1 20 300 319 300 322 0.94

8 8 3.9e-05 0.0037 18.3 2.8 1 23 328 351 328 351 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.1	9.8	7.5	0.3	2	23	41	63	40	63	0.92
2	8	0.00011	0.01	16.9	2.1	1	23	158	181	158	181	0.95
3	8	0.038	3.5	8.9	0.2	3	20	188	205	187	207	0.91
4	8	0.029	2.7	9.3	1.1	3	23	216	237	214	237	0.94
5	8	9e-05	0.0084	17.1	0.3	1	23	244	267	244	267	0.96
6	8	0.006	0.56	11.4	1.5	1	23	272	294	272	294	0.95
7	8	1.8e-06	0.00017	22.5	0.2	1	20	300	319	300	322	0.94
8	8	3.9e-05	0.0037	18.3	2.8	1	23	328	351	328	351	0.97

Sequence Information

Coding Sequence: ATGACCAAGGGATTTCTTTTTGTTCTAGGCGAAAACGCCTATTTTATGGCGAAGCGCAACGCGGAGTTTATCGTGAAATTTTCAACAGCGTACCCGTTCCGACTACCCGAGGATTCTATGGTTTGTGTGTACTGTTGCGAGAGTTATGACGATCCCGCCATGTATAGAAAGCACATGGACGAGGAACACCAAACCTTCACCGTCCGTACGGCGTTCGTTCACTGCACTGAAGGCTATATCAAAGTAGACTGCACAAATTTACGATGTCGCCTCTGTATGGACACGTTTGAGAGTTTAGATGATGTCGCGCACCATTTGTACCATAAACATGGACAACCACTCGATCTATCGTTCGAATTGGGTATGCAGCCATTCAAATTAGAGAAGGATAAAATAGCCTGCGCCATATGTAAAGCAAAATCGTTGTGTCTAAGACAATTAAGTAGGCACACGCAATCCCACTTCCTAAAATATACGTGTGACGCCTGTGGCAAATCGTACTCGACTATAACAACCCTAAAACACCACATAACATACACTCATTCGGGACAGGAGAGGATATGCAGAAAGTGTAAGAAAACTTTTGCGTCGTTGGCGGAGAAACGTGAACATTTGATTCAGTCTAAGAAGTGCTGGCCGCATCTATGCAGTGTTTGTGGAGAAAGATTCCTAACATGGAATACTAAACAGGCGCATATGACTAAAATCCATGGTGCTCCGAAAAGAACTTACGTGTGTCCAGAATGTAGCGAAGTTTTTCCGGATAGGAAAAAATATCGCGTCCATTTTAAAATTATGCACACAGATGATAATTTTGTTTGTTCATGCTGCGGCCTCAAATTTGATACGAAACTAAATTTGGAGAACCATAGAGTAATTCATACGAAAGAGAAACTATTTCCTTGTCCTGTGTGTTCTAAATCGTTCCCTAGAAAGAAAAATTTAGTACAACACATGTGGATACATAGCGAATTGAAGCGGTTTAGCTGTACGTTATGCAACAAACAATTTAATCAGAGAGTCAGTTGGAAAACTCATATGAAATCGTATCATCCGGACTTAGCCGATTTTCAAGACATGCAAAACAATAAAGCTAAAATGGTCTTGACTGTCTTGAAAAATGATGACTAG
Protein Sequence: MTKGFLFVLGENAYFMAKRNAEFIVKFSTAYPFRLPEDSMVCVYCCESYDDPAMYRKHMDEEHQTFTVRTAFVHCTEGYIKVDCTNLRCRLCMDTFESLDDVAHHLYHKHGQPLDLSFELGMQPFKLEKDKIACAICKAKSLCLRQLSRHTQSHFLKYTCDACGKSYSTITTLKHHITYTHSGQERICRKCKKTFASLAEKREHLIQSKKCWPHLCSVCGERFLTWNTKQAHMTKIHGAPKRTYVCPECSEVFPDRKKYRVHFKIMHTDDNFVCSCCGLKFDTKLNLENHRVIHTKEKLFPCPVCSKSFPRKKNLVQHMWIHSELKRFSCTLCNKQFNQRVSWKTHMKSYHPDLADFQDMQNNKAKMVLTVLKNDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00782979;
90% Identity: iTF_00774776;
80% Identity: -