Basic Information

Insect: Boloria selene
Gene Symbol: Hivep3
Assembly: GCA_905231865.2
Location: HG993160.1:4045249-4054227[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.11 10 7.5 2.3 1 23 210 233 210 233 0.97

2 11 0.014 1.3 10.2 2.4 1 23 240 262 240 262 0.98

3 11 0.2 19 6.6 0.4 1 23 266 289 266 289 0.91

4 11 0.98 91 4.4 3.0 1 23 296 318 296 318 0.96

5 11 2.2e-05 0.0021 19.0 0.3 2 23 324 346 323 346 0.96

6 11 1.7e-05 0.0016 19.4 0.2 1 23 353 375 353 375 0.98

7 11 0.022 2.1 9.6 3.2 6 23 386 403 382 403 0.92

8 11 0.0099 0.93 10.7 0.2 1 23 414 437 414 437 0.93

9 11 0.00049 0.046 14.8 6.3 1 21 443 463 443 466 0.88

10 11 5.8e-05 0.0054 17.8 0.2 3 23 477 497 476 497 0.98

11 11 0.045 4.2 8.7 0.9 2 23 504 526 503 526 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.11	10	7.5	2.3	1	23	210	233	210	233	0.97
2	11	0.014	1.3	10.2	2.4	1	23	240	262	240	262	0.98
3	11	0.2	19	6.6	0.4	1	23	266	289	266	289	0.91
4	11	0.98	91	4.4	3.0	1	23	296	318	296	318	0.96
5	11	2.2e-05	0.0021	19.0	0.3	2	23	324	346	323	346	0.96
6	11	1.7e-05	0.0016	19.4	0.2	1	23	353	375	353	375	0.98
7	11	0.022	2.1	9.6	3.2	6	23	386	403	382	403	0.92
8	11	0.0099	0.93	10.7	0.2	1	23	414	437	414	437	0.93
9	11	0.00049	0.046	14.8	6.3	1	21	443	463	443	466	0.88
10	11	5.8e-05	0.0054	17.8	0.2	3	23	477	497	476	497	0.98
11	11	0.045	4.2	8.7	0.9	2	23	504	526	503	526	0.94

Sequence Information

Coding Sequence: ATGACTGAATTCTTACAATTAACTCTACCAAATTATAGACCAAATGACTATACGACAACAACACAAGACATTCTCTGCATTTGCTGTTTAAGCAAAAATGTTCCACTGATTAATTTAACAAATTGTAAACATGTTCACATTTTTGATGTGTTATTGGAAATTAAGATACAAATGATTGATAACTTCATCTGTAATTCATGTCACAATATGCTAAAGAAATTAGAAGCTTTCAAGACACAAGTTCAACAAAATGTAAATATATTAACGAAAAATGCAACATCTATAAAAACACTAAAACAGCATCAAAACTTAAATTTCTCTCAAATTGAAATAAATTCAACAATAAATTCAGAACCAATTGAATTTCAAACAAAAAACAATTGCAATGCAACATTAGATTTTATACTAGAATGTGAGACTCAAATCAAAATAGAGCATGAGAGTTCAGATTTTGACGACACACCATTGGTAGAAATAAAAAATAAAAGATATAAAAAGGTAAAAGAAAATAGAACACCATTACAAAAGAAATATGATGGAAAGATAAAAATTACTGTTCTAAGTATGGAGGAAATGTTAGAAGATAGAAGACAGGAAGCTTTGAAAAAAAGTTTTGTAAAATTACCATATAAATGTGAATATTGTATAACGGCATTCGACCATGAATTGACTTATAAAGATCATATGGAGAAACGACATGAGAAAAAAAACGGTGGTTTTACATGTAAGATTTGTAAATCAATTCTAAGTACGAAGTCTTCGTATGACGAACATTATAAAAGGCATTTTAGGCGGTACGAATGCGTTGAGTGTGGTAAAAGAAATAACAACGTCTACTCCGTTTTAAAACACTACAATGAAAACCATGGGAAAATAGGGACCCAATTCGCTTGTAATCTGTGTGATTTTACTACTGAATCTCATAGAGTATACCGCTACCATCAAGAGAAACATCGCACAGCCAAAGTGGAGTGTGACAAGTGTGGCAACACCTTCGTCAATAATACTGGCCTGAGGAATCATATGTTTACCGTACACGGTCAGTCCAGTAGAGTTTATTCCTGTGACCAATGCGGAAAAATTTACCGCGCCAAGTCCGGTCTGACCGCGCACTTGGCGAAGCACTCGCCAAGTACCCCCGCGTATTGTGTGCCATGTGACACGCATTTTAGAAACGAAATGGGTTTAAAACATCATTTGAAAACGCATTCTAAACATATTTCTGATAGTGATAAACGGTTTATATGCAATGAATGCGGCGCCAAGTTTTTACTTAAAAGTTATTTACAAGAGCATATCGACTGGACTCATTTGAATAAAAGTAAGCACGCCTGTAATAAATGTTCTAAAGTATTCAAAAATAAGTCTTGTTTAAATAAACATAAGGACTTTGTTCACGAAAAGAAAAGGTTGCCTCGAAACAAAATATGTGATTATTGTGGCAGAGGATTTACTTCTCTCAGCATCCTCCAGTCCCACGTGCGCACACACACAGGGGAGCGTCCCCTCCACTGCGGACACTGCGCCGCCGCCTTCGCGCACCCCGCCGCCCTCTACACACACACCAAGCTGGTACACGGGAAGTAG
Protein Sequence: MTEFLQLTLPNYRPNDYTTTTQDILCICCLSKNVPLINLTNCKHVHIFDVLLEIKIQMIDNFICNSCHNMLKKLEAFKTQVQQNVNILTKNATSIKTLKQHQNLNFSQIEINSTINSEPIEFQTKNNCNATLDFILECETQIKIEHESSDFDDTPLVEIKNKRYKKVKENRTPLQKKYDGKIKITVLSMEEMLEDRRQEALKKSFVKLPYKCEYCITAFDHELTYKDHMEKRHEKKNGGFTCKICKSILSTKSSYDEHYKRHFRRYECVECGKRNNNVYSVLKHYNENHGKIGTQFACNLCDFTTESHRVYRYHQEKHRTAKVECDKCGNTFVNNTGLRNHMFTVHGQSSRVYSCDQCGKIYRAKSGLTAHLAKHSPSTPAYCVPCDTHFRNEMGLKHHLKTHSKHISDSDKRFICNECGAKFLLKSYLQEHIDWTHLNKSKHACNKCSKVFKNKSCLNKHKDFVHEKKRLPRNKICDYCGRGFTSLSILQSHVRTHTGERPLHCGHCAAAFAHPAALYTHTKLVHGK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00247531;
90% Identity: iTF_00212922;
80% Identity: -