Basic Information

Insect: Boloria selene
Gene Symbol: pita
Assembly: GCA_905231865.2
Location: HG993133.1:7892196-7905069[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.26 24 6.2 0.4 3 23 205 226 203 226 0.91

2 10 0.00013 0.013 16.6 0.7 2 23 232 253 231 253 0.97

3 10 0.0009 0.084 14.0 2.4 1 23 259 282 259 282 0.95

4 10 0.082 7.6 7.8 0.1 3 23 290 310 288 310 0.96

5 10 0.00014 0.013 16.5 4.3 1 23 317 340 317 340 0.96

6 10 6.6e-05 0.0061 17.6 1.4 1 23 346 368 346 368 0.98

7 10 7.8e-05 0.0073 17.3 8.1 1 23 374 397 374 397 0.97

8 10 0.0029 0.27 12.4 0.2 1 23 414 436 414 436 0.95

9 10 0.0048 0.45 11.7 0.1 2 23 442 463 441 463 0.97

10 10 0.00013 0.012 16.6 0.3 1 23 469 492 469 492 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.26	24	6.2	0.4	3	23	205	226	203	226	0.91
2	10	0.00013	0.013	16.6	0.7	2	23	232	253	231	253	0.97
3	10	0.0009	0.084	14.0	2.4	1	23	259	282	259	282	0.95
4	10	0.082	7.6	7.8	0.1	3	23	290	310	288	310	0.96
5	10	0.00014	0.013	16.5	4.3	1	23	317	340	317	340	0.96
6	10	6.6e-05	0.0061	17.6	1.4	1	23	346	368	346	368	0.98
7	10	7.8e-05	0.0073	17.3	8.1	1	23	374	397	374	397	0.97
8	10	0.0029	0.27	12.4	0.2	1	23	414	436	414	436	0.95
9	10	0.0048	0.45	11.7	0.1	2	23	442	463	441	463	0.97
10	10	0.00013	0.012	16.6	0.3	1	23	469	492	469	492	0.96

Sequence Information

Coding Sequence: ATGGAGAAGAGGAAAGATTCCTTGAACATAGTGACAATGTGCCGATTTTGCCTTAGTCAAAGTGAAACATTAGAAAGTTTGTATGACAGGAATCGATCAGGAAAGAATTCTCCTAATCTTCATTTAAAAATTTTATCTTGTGTCGCTATCGAGATATATCCATCAGACAAAATGCCAACATTTATTTGTGAACGCTGTAAATTCTTTATGAACCTTTTCTACGAATATAAACAAATTGTTCGCCAAGCTGATGAAACAATCTTACAATATATACAACATAATTCTCCAATGGAAATTGTTACATGGCCCTCAACCCTTTCTCAAGTGTATCGGAAAATGAATGAAATTGATATTGTCAAAACGCTACAGGGTGGTGCTACTGTGCAAGTCTCCTCTCATGATAACTCTGATACTGATGAAGAAGATGGAAATGTTTATAATATAAAGATTGGAGATGGTCCTGATAATGAAACAAAAACTGCTTGCGTCAAAATTATAAGAAGTAAAGATGGCAAAGAAATGAAAGAAGTTATTGAAGATACTAGCATAAGGGGTAAAGAGCAGCATGTGAAAGACACATCTGAAAAAGTTTTGGATGATGGTTGTTGGGCCTGTGATGAATGTGACTGCACATATCCTTTGCAGCAGTTGCTAGAACTACATAAAATCCAAAAACATAGGGAGCGAACAGTGGAGTGTGAGCAATGTGATGCAAAATTTTTCACCAAATATGATTTAACAACACATCAATTGCGGCACACAGACGAGATGCCATTCCAGTGTGTCGCTTGTGACAAAAAGTTTAAGCGACATATCTTACTAAAAAGACATGAAAAACTCATTCATTCAGATTTACCGCAACAAATATGTCCCAATTGTCCGGCTTCATTCTTATCTATAGAAGAGTTGGAGGCTCATAAAAAGAGGCATGTTCGCGTTCTGCGACCATTCATTTGCAACACGTGTGATAAAAAATTCCACGAAAAGTCGACGCTACAAAGACATATACATGTAATTCACAACAAAGCAGCCACTTACTGTTGCGAGTACTGTCCAGAGCGCTTTGTGTCCGTGGCCAAGTTGACAAGACATGTGCGGTCTCATGCGGGTGAACGACCCTACCCATGCAAGTTTTGTGATAAGACTTTTACAAAGTCACATCATTACACGAGGCATTTGCGTCAAACACACCGCGAGACGATACGATCTGGACGGGGGCCGTTCGGTGAGAGCGAGCAGTACCGCTGCGAGCAGTGCGAGGACACCTTCTCCACGCAGGACGAGCTCATCTACCACTCCGCCATACACGCCACCCAGAACCTCACCTGCCCGCTCTGCCAGGAGAAGTTCCAGGATGTGGACGCTGTCACTGCACACATTAAGTCGCATGTTAATGGTGTAGAGTTTATGTGTGACTACTGTGAACTAGTGTTTACTACAAAAGAAAAACTTGACAACCATCAAGCAATGGCCCACGAAGAAGAAATGCAATGTGATACATGTCCAGACGAGACGTCTATAGAGATTTTAGGTGTAGATGAAGAGGATGATAATGGAATAAATGTAAAAGAAGTGGGTGGTCATATGATAATTGAAATTAAAAAAGCAGATGAGTTTATGATTAACAACACTAGAGAATTACCTGAAGATAAAACAGAAGCTATGAATTCTGAAGAAAGCGAGGCGGAAACTTCGTATACGGAGTTTTCAGCGGTCGATACGCTACCGTTACTGAATAAAAGTCCGGTCAAAGTTCTAGAAAAACCCGCGCCTGTAATAGCACAAAAAGAACAAGTTAAACCTTTGACAGCCAAAGTAAAAGACAACCAGACTGCCAGTATACTTCGAAAAGCTGAAGAAGTAAAACGCAAAGTAGTATTACAACAAACAGATGAAGTAAATAATGAAAATAATAGTGCAGTTGTACAAAAAAAGAAAGTTGTGGAAGAAAAAAGAGTTCTTGAGGAGAATAAAGTTGTAGAAGAGAAGAAAGTTATAGAAGACAAAAAAGTTGTAGAAGACAAAAAAGTGTCAGAAGAGAAGGAAGTTCCAGTACAGAAGAAAGTACCAGAAGAGAAGAAAGCACCAGAGGAAAAGAAAGTACCAGATGCCAAATCAGCCAGTAAAGTAGAAACTTCAACTAGTGTTGGAGCTAGCGATAAATCTCTACGTTTGCTAGAAAAGGAACTACAAGATCTCAAAAGAACAAATAGCCGTATCGAAGCAACTAAAACTCCAATAAAGGCGACTGAAACTCTTAGAAGTAAACGCCTACAACTTCACACGTCTACACCAAAATTGAAACCCGTTGAAGAAAAGAAAGCGCTCGTTTTAAACAGATCTTACACAGTCGATAAGAAGCTAGAAAAACGCGTCATAACCAAAGAAAATAAAGAACCAAAAGAAGTCAAGGAATCAAAAAGTAATGTTAGCAATAAAGAAGACAAAGAAAAAGACACACCAAAGAGTGTTATCAAAAACGGTTCAAGTAGTGATAAAAGCAACTCCGATGAAGTTATTCGTCGATCAACGCGACCGTCTAAAATAAAGAACTATGCAAAAATGATACGTGACGTATCGCACACGGACTCTGATGAGGAGACCAGCAGTGAGGATGATGAAGAGTATAAAACTGTAGAGACTCGTCGAATCCAAGCTCGTCGCGTGAGTCTAACAAAACCGACGCCCGCGCCGTCGCCTGCCCCAGCGCCGCGGAAACGAGGGCGGCCAAGGAAAGTACCCCCCAAGGAAGTCCCCGCAAAAGTCAGGAAAGAAGACAATGAAGAAATCGAAGCTCAAAAAGAAGAAAACACAACACAGGAATCTAGTTTCATGCAAGATGATAAATTAGATAAAGAAGAAAGCGCTCCCGATAATATTGAGAGTATGAGTGAATCTCCAGAACCAAACAATCCACCAAATAACGTTGTTGTATCGCCGTCAGGACAAACGTTGAAAAAGGTACCTATAAAAGCTCTGCCACCCGGCATAAAACCATTGCCTCTACCAATAATTGCAAGACCTTTGCCGACAGGAGAATTATGTGAAATGCAAATCGGCAAGAAAGTTGTGAAAGTGCAAAAAATAGTTATGACAAAAGCTGAAGTTGAAGCCATGGCTAAAAAGGGTCTTGTGGAAATGAAGGACGGCACAATGGTTTTAAAGCAAGGGATCAAGCTTCCTAGTGTCGACTCGTCTATTAAGTCTAGTGCAGTTGGAGAAGTTTCAGAATCTCCTAATAAAAAAGAAAAAGCAGTACCGACACGATGTGATCTTGGAGAAGAGTCATAA
Protein Sequence: MEKRKDSLNIVTMCRFCLSQSETLESLYDRNRSGKNSPNLHLKILSCVAIEIYPSDKMPTFICERCKFFMNLFYEYKQIVRQADETILQYIQHNSPMEIVTWPSTLSQVYRKMNEIDIVKTLQGGATVQVSSHDNSDTDEEDGNVYNIKIGDGPDNETKTACVKIIRSKDGKEMKEVIEDTSIRGKEQHVKDTSEKVLDDGCWACDECDCTYPLQQLLELHKIQKHRERTVECEQCDAKFFTKYDLTTHQLRHTDEMPFQCVACDKKFKRHILLKRHEKLIHSDLPQQICPNCPASFLSIEELEAHKKRHVRVLRPFICNTCDKKFHEKSTLQRHIHVIHNKAATYCCEYCPERFVSVAKLTRHVRSHAGERPYPCKFCDKTFTKSHHYTRHLRQTHRETIRSGRGPFGESEQYRCEQCEDTFSTQDELIYHSAIHATQNLTCPLCQEKFQDVDAVTAHIKSHVNGVEFMCDYCELVFTTKEKLDNHQAMAHEEEMQCDTCPDETSIEILGVDEEDDNGINVKEVGGHMIIEIKKADEFMINNTRELPEDKTEAMNSEESEAETSYTEFSAVDTLPLLNKSPVKVLEKPAPVIAQKEQVKPLTAKVKDNQTASILRKAEEVKRKVVLQQTDEVNNENNSAVVQKKKVVEEKRVLEENKVVEEKKVIEDKKVVEDKKVSEEKEVPVQKKVPEEKKAPEEKKVPDAKSASKVETSTSVGASDKSLRLLEKELQDLKRTNSRIEATKTPIKATETLRSKRLQLHTSTPKLKPVEEKKALVLNRSYTVDKKLEKRVITKENKEPKEVKESKSNVSNKEDKEKDTPKSVIKNGSSSDKSNSDEVIRRSTRPSKIKNYAKMIRDVSHTDSDEETSSEDDEEYKTVETRRIQARRVSLTKPTPAPSPAPAPRKRGRPRKVPPKEVPAKVRKEDNEEIEAQKEENTTQESSFMQDDKLDKEESAPDNIESMSESPEPNNPPNNVVVSPSGQTLKKVPIKALPPGIKPLPLPIIARPLPTGELCEMQIGKKVVKVQKIVMTKAEVEAMAKKGLVEMKDGTMVLKQGIKLPSVDSSIKSSAVGEVSESPNKKEKAVPTRCDLGEES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00723401;
90% Identity: -
80% Identity: -