Basic Information

Insect: Boloria selene
Gene Symbol: Znf296
Assembly: GCA_905231865.2
Location: HG993131.1:10372271-10387488[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 3.7 3.4e+02 2.6 0.2 3 17 60 74 58 75 0.87

2 14 0.0015 0.14 13.3 0.0 2 19 178 195 178 196 0.95

3 14 0.002 0.19 12.9 2.6 1 23 239 261 239 261 0.95

4 14 2.6 2.4e+02 3.1 0.8 2 19 268 285 267 288 0.89

5 14 0.022 2 9.6 0.4 2 23 337 359 336 359 0.94

6 14 0.0039 0.36 12.0 0.2 2 20 365 383 364 385 0.92

7 14 0.00026 0.024 15.7 0.3 1 23 393 416 393 416 0.96

8 14 4.9e-05 0.0046 18.0 5.1 1 23 435 457 435 457 0.97

9 14 3.3e-06 0.00031 21.7 6.1 1 23 464 486 464 486 0.98

10 14 1e-07 9.6e-06 26.4 2.3 3 23 501 521 499 521 0.96

11 14 2.4e-05 0.0022 19.0 3.2 1 23 527 549 527 549 0.99

12 14 2.6e-07 2.5e-05 25.1 1.5 2 23 556 577 555 577 0.96

13 14 3.9e-07 3.6e-05 24.6 1.5 1 23 583 605 583 605 0.99

14 14 0.00024 0.022 15.8 0.1 1 23 611 633 611 633 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	3.7	3.4e+02	2.6	0.2	3	17	60	74	58	75	0.87
2	14	0.0015	0.14	13.3	0.0	2	19	178	195	178	196	0.95
3	14	0.002	0.19	12.9	2.6	1	23	239	261	239	261	0.95
4	14	2.6	2.4e+02	3.1	0.8	2	19	268	285	267	288	0.89
5	14	0.022	2	9.6	0.4	2	23	337	359	336	359	0.94
6	14	0.0039	0.36	12.0	0.2	2	20	365	383	364	385	0.92
7	14	0.00026	0.024	15.7	0.3	1	23	393	416	393	416	0.96
8	14	4.9e-05	0.0046	18.0	5.1	1	23	435	457	435	457	0.97
9	14	3.3e-06	0.00031	21.7	6.1	1	23	464	486	464	486	0.98
10	14	1e-07	9.6e-06	26.4	2.3	3	23	501	521	499	521	0.96
11	14	2.4e-05	0.0022	19.0	3.2	1	23	527	549	527	549	0.99
12	14	2.6e-07	2.5e-05	25.1	1.5	2	23	556	577	555	577	0.96
13	14	3.9e-07	3.6e-05	24.6	1.5	1	23	583	605	583	605	0.99
14	14	0.00024	0.022	15.8	0.1	1	23	611	633	611	633	0.98

Sequence Information

Coding Sequence: ATGGCTTTACAACCGATAAATATGAAAATAGAAAACTTATGCCGTACTTGTTTATCTAGAGAGTTTAAGATGCTCTCGGTCTTTGAAGTGCGTGTAGGAATGGACACATTGGACAACATAATTGCCTCAATAACTGGTGTAAAGATAGAACAAGGAGATGGGTTACCTTCTACAATATGCAATGATTGTAAAGAGAAAGTTGTTAGTGCATATGATTTTAAAACTCGCTCACAAGAAGCTGAAGCCACATTAAGAGGTCTACTTACTAGTAGTGAAAATTATTTGATATATAAGCCTAATGCAGTTGAAGTTAAAACAGAACAATATGTTACAGACAATCATGATGCTTATATGGATTTGGATTTATCTTTAGGTCTAGATAATGTTCAAGATACTTATAGTGATGTTGATGAAGTGAAATGTGAAGAAGTTGTAATTCAGCGCAAACAGTGTAATGTGAATTCTCAGCAATCAGAAAAAGCACTTAGTAAGGCTGAAGGCATAAACCAATCATCAAATGCAGAAAATAATTATTGCCCAGTTTGCGGATCAAGCTTTGTTGATCCTGAGGGTCTTACAAAACATGTTTGGGAACAGCATGCGGATCTCATGGGACCCAAGAAGAGGGGTCGACCAAAAAAATTACTTACTAGTAATATTCTAAATAAATTATCTGAAAATGGCTATAACTTGAAATATTTGCCAGATTTGAAACACAAATGTATGTTTTGCAAAGAAAATTTCAAAACCAAAGATGATTTGATAGTACACTTTTTAGAACATAAAGACATTAAATTGCTCAGTTGCTTAATTTGTAAGAAAATGTATCTTAAGAAGGATGATCTAGATAATCATAATTGTGTAGAGACTAGCAATAATTTGGATAACAGCAAACAGGAGAAGCCACCAGACGACCAAGAAAGTGGTCTTAATGTCAACATGTATAAAGAAACATTACTTCAGGACGTGTTAATGGCTAATGGGGATATGGAATCTGGAAATATAGATCCATGCAGTGAATGTGGCGAAGTATTCATGTGCAGTGGAGACTTGAGCAAACATCGGGATCGAGAGCATCCAGAACTTTCTTCACGGTGTCATCTATGTGATAAGGTATTTGCAACGGTAAAAAGCGCAGAGCGTCACCGTGCGATATGCTCGAGCGTAGAGCGATCGTTCGCGTGCCCCTCCTGCGGGCTTCGCTACGTTCACGAAGTGTCTCTCAACAAGCACATACTGAGAGTGCACGTGGGGCAGAGCGTGTCCGTACGCTTCATGAACCGGGACAAGGCACCGCCTCAACACAGTTGTGACATATGTAACCGACACTTTTACAGAAAGGACTTGTTGACGAGACATGCGAAGATGCACATGGAAATGGAAAAATGTTTCGAGTGCGACGTTTGCCACAAAAAGTTCCATAGAAGGGATAATCTCAAGACACACATGAAAGTGCACAATGCTGGTGACAAGAGCGGTGGCAAAGCGAACACCTGTTTGTGTCTGTACTGCGGTCGAAGCTTCTCGAACTCTTCCAACTTAATAGTTCACATGCGACGTCACACCGGCGAGAAACCTTACAAATGTGACTTTTGTGGCAAAGGATTCCCTCGATCATCAGATTTGCAGTGCCATCGACGTTCACACACCGGAGAGAAGCCTTGTGTATGCGGCGTCTGTGGCAAAGCGTTTTCACGAAGTAACAAGCTATCACGTCACATGCGTGTTCACACTGGCGTGAAACCGTACAAGTGTACATATTGCGAGAAAGCTTTCTCCCAAAGCAACGACCTAACCCTTCACGTGCGGCGGCACACTGGCGACAAGCCGTACGTGTGCGAGCTGTGTGGAGCCCGCTTTATACAGGGCACAGCTCTGCAAAACCATCGCCGCGCGCACGGCCACTACCCCCCGGCGCCGCTCGCCTACACCGTGCAGACTCTTGCACAAACGCACTGA
Protein Sequence: MALQPINMKIENLCRTCLSREFKMLSVFEVRVGMDTLDNIIASITGVKIEQGDGLPSTICNDCKEKVVSAYDFKTRSQEAEATLRGLLTSSENYLIYKPNAVEVKTEQYVTDNHDAYMDLDLSLGLDNVQDTYSDVDEVKCEEVVIQRKQCNVNSQQSEKALSKAEGINQSSNAENNYCPVCGSSFVDPEGLTKHVWEQHADLMGPKKRGRPKKLLTSNILNKLSENGYNLKYLPDLKHKCMFCKENFKTKDDLIVHFLEHKDIKLLSCLICKKMYLKKDDLDNHNCVETSNNLDNSKQEKPPDDQESGLNVNMYKETLLQDVLMANGDMESGNIDPCSECGEVFMCSGDLSKHRDREHPELSSRCHLCDKVFATVKSAERHRAICSSVERSFACPSCGLRYVHEVSLNKHILRVHVGQSVSVRFMNRDKAPPQHSCDICNRHFYRKDLLTRHAKMHMEMEKCFECDVCHKKFHRRDNLKTHMKVHNAGDKSGGKANTCLCLYCGRSFSNSSNLIVHMRRHTGEKPYKCDFCGKGFPRSSDLQCHRRSHTGEKPCVCGVCGKAFSRSNKLSRHMRVHTGVKPYKCTYCEKAFSQSNDLTLHVRRHTGDKPYVCELCGARFIQGTALQNHRRAHGHYPPAPLAYTVQTLAQTH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00212792;
90% Identity: iTF_00212792;
80% Identity: -