Basic Information

Insect: Boloria selene
Gene Symbol: -
Assembly: GCA_905231865.2
Location: HG993146.1:2944614-2955007[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00013 0.012 16.6 2.8 1 23 169 191 169 191 0.98

2 11 8.3e-05 0.0078 17.2 0.5 2 23 228 249 227 249 0.98

3 11 2.2e-06 0.0002 22.2 2.0 3 23 258 278 256 278 0.97

4 11 2.7e-05 0.0026 18.8 0.3 1 23 284 306 284 306 0.98

5 11 3.4e-06 0.00031 21.6 0.9 1 23 312 334 312 334 0.96

6 11 1.3e-06 0.00013 22.9 1.2 1 23 339 361 339 361 0.96

7 11 4.4e-06 0.00041 21.3 0.6 1 23 367 389 367 389 0.98

8 11 8.4e-06 0.00079 20.4 1.1 1 23 395 417 395 417 0.98

9 11 3.1e-06 0.00029 21.7 4.6 1 23 423 445 423 445 0.99

10 11 1.2e-06 0.00011 23.0 0.7 1 23 451 473 451 473 0.99

11 11 5.7e-05 0.0054 17.8 0.6 1 23 479 501 479 501 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00013	0.012	16.6	2.8	1	23	169	191	169	191	0.98
2	11	8.3e-05	0.0078	17.2	0.5	2	23	228	249	227	249	0.98
3	11	2.2e-06	0.0002	22.2	2.0	3	23	258	278	256	278	0.97
4	11	2.7e-05	0.0026	18.8	0.3	1	23	284	306	284	306	0.98
5	11	3.4e-06	0.00031	21.6	0.9	1	23	312	334	312	334	0.96
6	11	1.3e-06	0.00013	22.9	1.2	1	23	339	361	339	361	0.96
7	11	4.4e-06	0.00041	21.3	0.6	1	23	367	389	367	389	0.98
8	11	8.4e-06	0.00079	20.4	1.1	1	23	395	417	395	417	0.98
9	11	3.1e-06	0.00029	21.7	4.6	1	23	423	445	423	445	0.99
10	11	1.2e-06	0.00011	23.0	0.7	1	23	451	473	451	473	0.99
11	11	5.7e-05	0.0054	17.8	0.6	1	23	479	501	479	501	0.97

Sequence Information

Coding Sequence: ATGGCTGCCGAGAAAAATGTACAATCATATGAAAACTGCTGTCGCACTTGTATGAATGAGGACTTACCTATGTTTGATATTTTTATTTATACCTTAAATTCCACAAATTTAGCGGATATTTTAACGTCGTGTACAAAATTAAATGTGGAGAAAGACGACGCTTTGCCAAAAAAAATGTGCAAATTTTGTCAACAATGTCTTCTAAGTTTTTACAATTTTAGAGAAGTTGCTGAAAAAGTAGATTCAAAATTAAGAGAACTAGTTCTTAGTAATGATGAGTCAAAGTACTTAAATATTGAAATAGAAAAAGACTTGAAAATTGACTTGAAACTTGAGTTGATCAAGGATGAAAATGAGTCTGATGGAGATGACTTTGTTATGTTTGAACCTAAAATTGAAACGAAAAAAGAAGATGTCTCAACATTTGCTACAGATGAAAATAAAAATACTAATAAGTGTAACTCTAATAAATCTAAATGTAAAGAAAGATCTGAGAAAAAGAAATATTATTGTGATTATTGTAATAAATCATTTATGAAACTATCAAGATTAGAATACCATCTACAAAGGCACAAGGCTGATAACTGTGCACAAAATAATATAAATGTTGATAATCAAATTTCACCTTTAAAAAATAATGATATGAATACAAATAATGAGCAAACATCAGGTGAAGTTGTTCAATGTAGTATATGCCCTTCAAAGTTTAAATCTGTGAATTCTCTATCGGCTCATATGAGAAAGCATACAGAAAAGGGTAGAATAATAGCTTGTGGTAAATGTGGTAAAGTTTTTAAAAAAGTAAGTCATTTGAAACGTCATGAAAAAACTCATGAGAATAATAGGAAATATATATGTTCTGTGTGTCCAAGATCTTTTCAAAGTGAGGAAACATTGAAGGGACATATGAACAGGCATAATGGTATAAAACCTCATGCATGTCCATTATGTCCTAAATCGTTCGCACATTTAACAACTTTAACAGCACATATTAAAGTTCATCAACGAGATAAGTTTTTATGTCCCACATGTGGGAAAAAATTTGATTCTAGTACTAATTTAGATCAACATATGAAGAGGCATTTAGGATTAAAGCAGTTTGAATGTACAATGTGTCCAAGAAAATTTGTTAGCAAAGGTGAATTAAAATCACATACAATAACACATACAAGGGAAAAGTCATACACTTGCGATCAATGCGGAGCATCTTTTACAAAACAAACATCGTTAGCGAAGCATAAGCTACGACATTTAGGTATCAGACCATATCAATGTGACACCTGTTCAATGAGGTTTTCAAGTAGGGATCATTTAAAACGACATTATCGCATTCACACAGGTGAGAAACCATACAAATGCGAATTGTGTGAAAGGGCTTTTACACAAAGTAATGATCTTGTCAAACATCGTAGAGTGCATTTAGGGGACAAAATTTACAAATGTACAGAATGCACAGAAAGTTTTCGACTTAATATTGAATTGAGGCAACATATATCGGAACATTATATTTCATCGAAAAAAGACAAGAAAATATCAAATGATGCCAAAATGACAGATAACGTTGCACAGATTAGTAATTCATCTATAATTGAAAAAGTGTTCGTTCAATCTCGACGGTCGCTCGGACCTTCGGCGAAACCTTCGGCTTCGGCCGGGTTTTGGGCCGAAGCCGAATGTTTCGCCGAAGGTGGATTTTTTGGCCGAAGGTGGCCGAAGCCGAAGCCGAAGCCGGAGCTTCGGTCGGACACTACTCGACTCGGAACTCCAACCCAGGATCTTTGGATCTGCACCAGCTAG
Protein Sequence: MAAEKNVQSYENCCRTCMNEDLPMFDIFIYTLNSTNLADILTSCTKLNVEKDDALPKKMCKFCQQCLLSFYNFREVAEKVDSKLRELVLSNDESKYLNIEIEKDLKIDLKLELIKDENESDGDDFVMFEPKIETKKEDVSTFATDENKNTNKCNSNKSKCKERSEKKKYYCDYCNKSFMKLSRLEYHLQRHKADNCAQNNINVDNQISPLKNNDMNTNNEQTSGEVVQCSICPSKFKSVNSLSAHMRKHTEKGRIIACGKCGKVFKKVSHLKRHEKTHENNRKYICSVCPRSFQSEETLKGHMNRHNGIKPHACPLCPKSFAHLTTLTAHIKVHQRDKFLCPTCGKKFDSSTNLDQHMKRHLGLKQFECTMCPRKFVSKGELKSHTITHTREKSYTCDQCGASFTKQTSLAKHKLRHLGIRPYQCDTCSMRFSSRDHLKRHYRIHTGEKPYKCELCERAFTQSNDLVKHRRVHLGDKIYKCTECTESFRLNIELRQHISEHYISSKKDKKISNDAKMTDNVAQISNSSIIEKVFVQSRRSLGPSAKPSASAGFWAEAECFAEGGFFGRRWPKPKPKPELRSDTTRLGTPTQDLWICTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00247407;
90% Identity: iTF_00212793;
80% Identity: -