Bsel022793.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Boloria selene
Gene Symbol
-
Assembly
GCA_905231865.2
Location
HG993159.1:1458596-1465873[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 48 0.0021 0.19 12.9 0.5 2 23 11 33 10 33 0.95
2 48 0.059 5.5 8.3 0.6 2 23 39 61 38 61 0.92
3 48 0.00084 0.079 14.1 1.4 1 23 66 89 66 89 0.95
4 48 9.4e-07 8.8e-05 23.4 5.7 1 23 93 116 93 116 0.97
5 48 0.0039 0.37 12.0 0.1 2 23 123 144 122 144 0.96
6 48 0.05 4.6 8.5 1.0 2 23 193 214 192 214 0.95
7 48 0.068 6.4 8.1 0.1 2 23 242 264 241 264 0.94
8 48 0.037 3.5 8.9 0.2 2 23 285 307 284 307 0.92
9 48 0.00013 0.012 16.6 1.7 3 23 314 335 312 335 0.96
10 48 0.00053 0.05 14.7 1.9 1 23 339 362 339 362 0.96
11 48 0.00028 0.026 15.6 3.2 1 23 463 486 463 486 0.96
12 48 2.3 2.1e+02 3.3 0.1 2 23 514 536 513 536 0.94
13 48 0.0012 0.11 13.6 0.4 1 23 558 581 558 581 0.93
14 48 6.2e-05 0.0057 17.7 2.8 3 23 588 608 587 609 0.94
15 48 0.00022 0.02 15.9 1.6 1 23 615 638 615 638 0.95
16 48 1.5e-05 0.0014 19.6 1.0 1 23 643 666 643 666 0.96
17 48 0.073 6.8 8.0 6.3 1 23 670 693 670 693 0.96
18 48 0.17 16 6.8 2.7 2 23 700 721 699 721 0.96
19 48 0.052 4.9 8.4 0.2 1 23 769 791 769 791 0.97
20 48 0.36 33 5.8 0.0 3 23 820 841 818 841 0.94
21 48 0.042 3.9 8.7 0.1 3 23 863 884 861 884 0.94
22 48 0.0022 0.2 12.8 0.9 2 23 890 912 889 912 0.96
23 48 4.9e-05 0.0046 18.0 3.3 1 23 916 939 916 939 0.97
24 48 0.51 48 5.3 0.3 1 20 969 988 969 990 0.95
25 48 0.0016 0.15 13.2 2.3 1 23 1036 1059 1036 1059 0.96
26 48 1.1 98 4.3 0.1 2 23 1087 1109 1086 1109 0.95
27 48 0.016 1.5 10.1 0.7 1 23 1130 1153 1130 1153 0.96
28 48 1e-05 0.00093 20.1 0.5 1 23 1158 1181 1158 1181 0.96
29 48 0.0011 0.11 13.7 0.9 2 23 1187 1209 1186 1209 0.93
30 48 0.0049 0.45 11.7 0.6 2 23 1215 1237 1214 1237 0.92
31 48 0.0036 0.34 12.1 5.5 1 23 1241 1264 1241 1264 0.97
32 48 0.0014 0.13 13.4 1.2 2 23 1271 1292 1270 1292 0.96
33 48 0.0015 0.14 13.3 3.8 1 23 1328 1350 1328 1350 0.98
34 48 0.0033 0.31 12.2 1.0 2 23 1421 1443 1420 1443 0.95
35 48 0.00026 0.024 15.7 0.7 1 23 1448 1471 1448 1471 0.97
36 48 0.012 1.1 10.4 3.1 1 23 1476 1499 1476 1499 0.95
37 48 0.082 7.7 7.8 2.6 2 20 1502 1520 1502 1524 0.94
38 48 0.87 81 4.6 2.9 2 20 1528 1546 1527 1548 0.93
39 48 0.017 1.6 10.0 0.3 1 23 1599 1622 1599 1622 0.93
40 48 0.00021 0.02 16.0 0.1 2 23 1695 1717 1694 1717 0.96
41 48 0.00032 0.03 15.4 0.2 3 23 1724 1745 1723 1745 0.94
42 48 0.013 1.2 10.4 2.6 1 23 1749 1772 1749 1772 0.95
43 48 0.0081 0.75 11.0 3.8 1 23 1777 1800 1777 1800 0.97
44 48 0.00012 0.011 16.8 6.8 1 23 1804 1827 1804 1827 0.97
45 48 0.00065 0.06 14.4 0.3 2 23 1834 1855 1833 1855 0.96
46 48 0.2 19 6.6 0.3 1 23 1912 1935 1912 1935 0.97
47 48 0.017 1.6 10.0 0.1 2 23 1966 1988 1965 1988 0.94
48 48 0.0095 0.89 10.8 1.2 2 23 2011 2032 2011 2033 0.95

Sequence Information

Coding Sequence
ATGAATGAGTTTCATTCGGATAATAATATAGTCTGTGCTCAATGCGGTTTGACATTTCGAGGGCACCCTAACTATCGAGCTCATATGTCACGGTACCACAGAACTAAAGCGTGTAAATGTCCGGATTGTAACATGGAGTTTTGGAATTTGGAAAAACTAGCGCGCCATAGAGCTAATATACATGGTACGAAAAAATACAAATGCCCCCAATGTGTTGAGAAGTTTATCACCCAACATTTGATGCGTAAACACCAAATTTTAGTACACGGTTTCGGACATAAATGTCCATATTGTGGGAAGATGTTTACGCGTAATTCTCACATGAAAAACCATGTAAGACGTCTCCATTTAAAGGAGAAGAATGTAGAATGTGCTGTTTGTAAAGAGAAATTCTTTGACAGAGCCCTTCTAAACGTTCATATGGTTAAGCATGGTACATTTTACATTTCGGAAAATTTCTTTTCAGATGTAATTGGGCCATCAAAGACGCTTAGTCCTAATACACTGAGGCGACGAAATCTTCTCATTTTGTTCAACAACACATCAATTATACCGTTTAAATGTCGGGTGAAATGTAGGTGTTTTTATTGTGGGGAGGAACTACCAGTTTATGAGGATTTAAGAAAACACACAAAGGCTCATGGTCCATGTTCGGAAAACGATCGTGCTATTCGATTAGTGAAAACTGATGACGCGGTAGTTAAAGTCGACATATCAATTATTAGTTGCGAGATTTGTCACGAACCTTTTCCTAACTTTGACGAAATTGTGTCTCATTTGATTGTAAAACATTTGCTACCTTACGATAAAGATGTTAAACTAATAATAATGATGTACCGTCTCGTTGACTTGCAATGTATTGTATGTGAGAAATTTTTTTATCAAGTCAGTGAGTTAGTTACGCATGTAAATACTGAACATCCAGTACAAAGTCTAGATTGTGACATTTGTCACCAAAAATTTATTAGAAAATCATATCTCGACACTCATATTAGGATCAAACATAAACAAGACTACAAATGCTTAAAATGTTCCCAAACTTTTTCATCTTATTCAGCGCTTCAAGAACACAAAATCAAATCGCACATAGCTGTTTGTAATATTTGTTTCACGAAATTTTCTTGTCAAAAGAAAAGATTAAAACATATGAAACTAGAGCATAACAATGGAGAATTAAAATGTGGATTTTGTTTGAAATCTATGAATACTAAGTTAGGGTTTTTGAGGCACGCTGCTAAATGTACGGAATACGGTGTAAAAGAGAACGAGTCTTTGGTAATCGATGATGATGATGACAAAAAACCAGCTGTAATCCAAATTAGAAATAATATTGCTTGCGTTCTTAATATGTCAACAGCTATACCGTTCAAATATTTCATGAGTAGATTTAGATGCTTCTATTGTCCGAAAAATTTTACTGACTGTGAAGAACTGAAACAGCATACAGTAACTGAACATCCCGTATGTGATATAAATTTCAAATGCATGAGACTGCGGAATAGGCAAGAGGGTTGCGTTAAAATTGATACGTCAACACTTTCATGTAAAATGTGCTATGAATCTATGTCAGGTTTAGATTCTTTAATAGATCACTTAATTTCTGAACACAAAGCTTTGTACGATAAGTCCATAGATAGTAATATGCAACCATACAAGTTAATTAAAGACAATTACCCATGTCCTATTTGTGAGGACGTATTTACTCATTTTAGTACATTATTAAAGCATATGGGTCAAATACATACTGATAATAAAAATATATGCATGCATTGCGGCAAATCGTTCAGAAATTTACCAAATTTGAGGGTACACATTTCGAATCATCACAGAACAACGGGAACTTATAAATGTGATCGATGTGATCAAGAGTTCTCGTCTAATAAATACTTGCAAACACATTTAGGACGCTCCCATTCTCTCAAAGTTTTCGAATGTCCGGAATGCAAAGAAAAATTTACATCTAACTACACGATGCAAAGGCATATGATTAATATGCATAGTTCCGGTCATAAGTGCAATTACTGCGGTAAACTCTTCACCTCTAATTGTTTTATGCTCGATCACGTGAAACGAACCCACTTAAAAGAAAAAAATGTAGAGTGTCGGATCTGTTATGAAAAGTTTTTTGACACACAATGCTTAAAAACTCATATGGTTAAACACAATGGCGAGAGAAATTTCCATTGTGATATTTGCGATTTAAACGCCCTGTCCAAGAAAAGTAGTGACAATAAGCTAAGAAGGTTCAATCTGCAAATTTTATTCAATAATACCTCCATTATGCCATTTAAGTGGCGCGGAAAATATGTATGCTTTTATTGCGGGGAAGAACCGAAAACTTATGATGAGTTAAAGATACATACAAAAGCACATGGAGAATGTTCAGATAACGACAGAACTCTAAGACTGATAAGAGCAGCTAATGTTGAAGTCAAAGTTGACATATCTACTATTATATGTAAACTCTGTAAAATATCATTTGCAGATTTAGATGTAATCGTTGCCCACTTAATTACTACACATAATTTACAATATAATAGAGATGTGAAGCTGTCTATAGTGCCATACAGATTAGCAGATTTAATATGTCTATCTTGTGATGAGAAATTTACGTATTTAGGCAAATTAATAAGTCACGTTAATGTCGAACATCCGAGTCAGAGTTTAGTTTGCTTAAAATGTGGACAAATGTTTAACAAAAAACGTGATTTAGACGCGCATAATCGTACTAAGCATAGAAACCAGTACACTTGTACGAAATGTTCCAGGAAATTCTCAACCAGTTCAGACCTTTTGAGTCATAAGAGAAACTCTCATTCATCTAAATGCAATATATGTTTCAAAAGTTTCCTATCGTTTCGAAAATGTGTAGAGCATATTAAAAACGATCACTCTGCCACGACCTATAAATGTGGGTTTTGTTTGTATTCAGCGACCTCTAAAAAAGAATTTATTAAACACGTCGCAGAATGTACTGAAAGTGTAAAGACCATAGACAATAGACAAAACGATAAAAAAAAGCCTTTTGTGAAACAAATTAGAGAAAATTTAGCATGCATCTTCAACATGTCTACAGCTATGCCTTTCAAATATTTTATGAGTAGATTTAGATGCTTCTACTGCCCTAAAGACTTTAACGAGTGTGATGATCTCAAACAACATACATTAATTGAACACCCTCTGTGTGATACAAAATTAAAATCTATGAAGTTGCGTAATATACAAGATGGTTTAATCAAAGTGGACATATCCTCCTTGTCTTGTAAACTATGCTTTGAGAAGTTACAAGATTTAGATGGATTGATAGAACATTTGAAAAGTGAACATAAAATACACTACGATACATCTGCTTCTAATGTACAGCCTTACAAATTAATAAAGGATAACTTCCCATGTCCCTTTTGTGAGGAAATATTTAGATATTTCCGAACGTTATTGAATCACGTGTCTAAAAGTCACTCGGATAACAAATATATATGTGTACATTGTGGCTTAACGTTTCGGAACTCACCCAATTTACGCGCACATATTGCTAGGCGTCACAAGGCGGCCAGTTTGAAATGTTCTAAATGTGATTTGCGATTTTTTACTAATAATGATTTACAAAATCATTTAGGTCGAGTGCATGACACTAAATTCGTTGAGTGTCGTGAATGTAAAGAGAAATTTAAGTCGGCATATGAAATGCAAAAGCATAAGATTAATGTTCATAGTTCAGGACACGAATGTTCTTATTGCCACAAGCTGTTTACTGGAAAATCGTCCGTTTTCAATCATATTCGACGAACTCATTTAAAAGAGAAAAATGTCGAATGTACTGTTTGCCATGAAAAGTTTTTTAATTCACAAGGCCTGAAAGTACATATGGTCAAACATAATGATGAAGTCCCGTACGGCCTCAGCACCTCTGAGCGCAGACGAAAGAACTTGCAAATACTGTTCAACAACACCTCAATAATGCCTTTCAAATGGCGGGGAAGATATATATGTTTTTATTGTGGCCAAAATTACACAGACTACAAAAGTTTCAGAAAACATACGAAATCTCATGGTCTTTGCAGTACAACAGATTACGCATTAAAACTTATAAAAGGGAATCATATAGAAATAAAAATTGACATTTCCGAAATAGCTTGTGAAATTTGTTGCGAGACATTAACCAGTTTTACTGAAATAGTAGACCATTTGGTTAAAAAGCATGATTTGAAATATGACAAAAGCATCGACATTCCCTTCCAGGAGTATCAGTTGTCAGATTGTCGATGTCGAATATGTGGTGAAGTGTTCACGTATTTTGGATTCTTAATAACTCACACCAATGTCGTTCATCCGCAAAATACTTTTATTTGCGATAGTTGTGGCGAAAAGTTTAACAAAAAGAGAGATCTAGCGATTCATATAAAACGTTTCCACCAAGATGGCGGGTATCATTGTGATGAATGCTCAGAAGTATTCATTTCCCACGGGCTTTTAAGTAAGCATAAAAACAATTTCCATTACAGGAGATGCAAAATATGCGATTCACGTTTTCCTTCCTACACTCTTCTGAAGAAACATGTACAATGTGATCACTCAGATGATAAATGCCCGTATTGTTCAATAAAATGTCATTCCTCGCAAGGTCTTAGACAGCACACATCGAAATGTACTAAAAGATCTCTCATTAATACAAAACCACTGTTTCCCGAAGAAACGATACAACCGATCAAAAAGAAAGACCTCAATCAAATAAGGAAAAATATATTATGTGTTCTAAACATGTCTACGGCGGTACCATTTAAATTTATCACTAAATATTCGTGTTTTTACTGCTCGAAAAGTTACGTTGAGTTTGAGGAGCTCAAGGAGCATGTAGTGGTTGCCCATCCTGTTTGTGACATAGAAGAAAAATGCATAAAAAATCGCAAAGGGGAAAGGATTTCAGTTAAATTAGATATATCGTCTCTAGCGTGTAGAGTATGTTTTGAAACTTTAGAAAATGTAGACGGTCTGGTCGATCATCTTATATTAAAACATAAAGCGGAATATGACAAATCTGCAATAGATTGCTTCGAATCCTTCAAAATCGTCAAAGACAATATTCCTTGCCCAATTTGCTCGACTGTTTTTAGATACTTTGGTTCACTTTTACGACATATAAATTCTGAACACAGTGATAATAGTAAAATTTGTGATTTTTGTGGGCGTAGTTTTAAAAAGGTAGCTAATTTAAGAGTTCACATAACTTACGCGCATTTGGGTCCTTTCGAGTGCGATATTTGCAAAGCGAAGTTCAAAAATCAATGGTGTTTAGGCCGCCATAAGGCGAAATATCATAACGCGAAAGAGTTTCAGTGCAAAAAATGTCCGGAACTATTCCAATCTCAATACCATAAACAAAAGCATATGATCAAAGTACACAATATTGGTCATAAATGTTCGCACTGTGGAAAAATGTTCACCAGAAATTCGTTCATGAAGGACCATGTGCGCAGGACGCACTTGAAAGAGAAAAATGTACCGTGTACAGTTTGCAATGAGAAGTTTTTTGATAATTACTTATTAAAGTTACATATGGTGAAACACAAGGGTGAGAGGAAGTTTAGTTGCGAATTTTGTGGTACAAAATTGTGTACAGTGGAAGACAAATATAAGAAAACTGAAATGGTGCGTAAACTGTTAATTAAACGTCGAAATGGTGAATACGTTTTGCAATATAGTAATGTTACACCATTTATGTGGTACAAAGGAAAGTACAAATGTTTCTATTGTGTTCAACCTATGAAAGATCCGGTTCTTTTACGTGAGCATACAAATAAAATACACCAATTTGATAACTTGGAACTCGTTGTCTATGATCGAACTAAAAATAATAGAAATAAAGATGCTGCTGTGAAAATTGACGTTACGGACATATCCTGTAAACTATGTTCCAGATCAGTTAACAGTCTAGAACAGCTGATTAACCACTTGATAATAGCTCATGATGCAGAATATGATGTCAGCGTTCCTAACTGCTTTCTTCCTTTTAAGTTAGGCACAGGGCAGCCCACTTGCCCTATATGTGAAATGAAATTCGTTTTCTTCGAATATCTTTTGCGTCACGCGAATAAGCATCACCTATCACACGATTATATATATAGATACGTCAACACTTTAATGTAA
Protein Sequence
MNEFHSDNNIVCAQCGLTFRGHPNYRAHMSRYHRTKACKCPDCNMEFWNLEKLARHRANIHGTKKYKCPQCVEKFITQHLMRKHQILVHGFGHKCPYCGKMFTRNSHMKNHVRRLHLKEKNVECAVCKEKFFDRALLNVHMVKHGTFYISENFFSDVIGPSKTLSPNTLRRRNLLILFNNTSIIPFKCRVKCRCFYCGEELPVYEDLRKHTKAHGPCSENDRAIRLVKTDDAVVKVDISIISCEICHEPFPNFDEIVSHLIVKHLLPYDKDVKLIIMMYRLVDLQCIVCEKFFYQVSELVTHVNTEHPVQSLDCDICHQKFIRKSYLDTHIRIKHKQDYKCLKCSQTFSSYSALQEHKIKSHIAVCNICFTKFSCQKKRLKHMKLEHNNGELKCGFCLKSMNTKLGFLRHAAKCTEYGVKENESLVIDDDDDKKPAVIQIRNNIACVLNMSTAIPFKYFMSRFRCFYCPKNFTDCEELKQHTVTEHPVCDINFKCMRLRNRQEGCVKIDTSTLSCKMCYESMSGLDSLIDHLISEHKALYDKSIDSNMQPYKLIKDNYPCPICEDVFTHFSTLLKHMGQIHTDNKNICMHCGKSFRNLPNLRVHISNHHRTTGTYKCDRCDQEFSSNKYLQTHLGRSHSLKVFECPECKEKFTSNYTMQRHMINMHSSGHKCNYCGKLFTSNCFMLDHVKRTHLKEKNVECRICYEKFFDTQCLKTHMVKHNGERNFHCDICDLNALSKKSSDNKLRRFNLQILFNNTSIMPFKWRGKYVCFYCGEEPKTYDELKIHTKAHGECSDNDRTLRLIRAANVEVKVDISTIICKLCKISFADLDVIVAHLITTHNLQYNRDVKLSIVPYRLADLICLSCDEKFTYLGKLISHVNVEHPSQSLVCLKCGQMFNKKRDLDAHNRTKHRNQYTCTKCSRKFSTSSDLLSHKRNSHSSKCNICFKSFLSFRKCVEHIKNDHSATTYKCGFCLYSATSKKEFIKHVAECTESVKTIDNRQNDKKKPFVKQIRENLACIFNMSTAMPFKYFMSRFRCFYCPKDFNECDDLKQHTLIEHPLCDTKLKSMKLRNIQDGLIKVDISSLSCKLCFEKLQDLDGLIEHLKSEHKIHYDTSASNVQPYKLIKDNFPCPFCEEIFRYFRTLLNHVSKSHSDNKYICVHCGLTFRNSPNLRAHIARRHKAASLKCSKCDLRFFTNNDLQNHLGRVHDTKFVECRECKEKFKSAYEMQKHKINVHSSGHECSYCHKLFTGKSSVFNHIRRTHLKEKNVECTVCHEKFFNSQGLKVHMVKHNDEVPYGLSTSERRRKNLQILFNNTSIMPFKWRGRYICFYCGQNYTDYKSFRKHTKSHGLCSTTDYALKLIKGNHIEIKIDISEIACEICCETLTSFTEIVDHLVKKHDLKYDKSIDIPFQEYQLSDCRCRICGEVFTYFGFLITHTNVVHPQNTFICDSCGEKFNKKRDLAIHIKRFHQDGGYHCDECSEVFISHGLLSKHKNNFHYRRCKICDSRFPSYTLLKKHVQCDHSDDKCPYCSIKCHSSQGLRQHTSKCTKRSLINTKPLFPEETIQPIKKKDLNQIRKNILCVLNMSTAVPFKFITKYSCFYCSKSYVEFEELKEHVVVAHPVCDIEEKCIKNRKGERISVKLDISSLACRVCFETLENVDGLVDHLILKHKAEYDKSAIDCFESFKIVKDNIPCPICSTVFRYFGSLLRHINSEHSDNSKICDFCGRSFKKVANLRVHITYAHLGPFECDICKAKFKNQWCLGRHKAKYHNAKEFQCKKCPELFQSQYHKQKHMIKVHNIGHKCSHCGKMFTRNSFMKDHVRRTHLKEKNVPCTVCNEKFFDNYLLKLHMVKHKGERKFSCEFCGTKLCTVEDKYKKTEMVRKLLIKRRNGEYVLQYSNVTPFMWYKGKYKCFYCVQPMKDPVLLREHTNKIHQFDNLELVVYDRTKNNRNKDAAVKIDVTDISCKLCSRSVNSLEQLINHLIIAHDAEYDVSVPNCFLPFKLGTGQPTCPICEMKFVFFEYLLRHANKHHLSHDYIYRYVNTLM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-