Bsel021104.1
Basic Information
- Insect
- Boloria selene
- Gene Symbol
- -
- Assembly
- GCA_905231865.2
- Location
- HG993154.1:4518606-4519367[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.9 3.9e+03 -1.7 0.2 35 44 3 12 1 12 0.83 2 2 6.3e-10 3.6e-07 30.4 0.0 3 40 16 53 14 56 0.92
Sequence Information
- Coding Sequence
- ATGGTTCGACACTATAAACGAAAAACAACCACTAAATATGATCTTGAAACATTAAAAAAAGCTGTAGATGAAGTACGAACTGGCAAAATAAACTCGTATCAAGCGGCAAGGAAATACAATATACCTCGCACGACTATATGTGATCGAGTGAGTGGAAAAAGAGGTGTTGTAAAAGACACTCGTGGACCACCTACCGTGATTAACACAGAAAACGAGCTCAAACTAGCAAATGGTCTGCGAGTTATGGAGAAGTACGGGTTTGGACTTACGTCTAAGGAAACACTAGAGTTAGTCAGCATACATGTGAGTGAAAACAAGTACTTAACCCCGTTTAAAAACAACCAACCTGGATACGATTGGTTTGCTTCTTTCAAAAAGAGACACAATTTGTCCTTAAAAAAGCCACAAGCAGTTGAGATGTCCAGGAAAGTTGCTTGTGACCCTTTTATAGTAAACGAGTACTTTGATATCCTTGAAGAGGTTTTGAATGAACTGGGTTTAAAAGGAAGACCAGAAAAAGTTTGGAATCTTGACGAGTCCAGTTTTGGAAATGACCCAGATAAAACAAAAGTTGTTGGCGCCCGTGGATTTGCCAGTACAAGAACTATCGCCTCATCTGGCAAAGATAACGTCACGATCTTATTCACTGCCAGCGCAGTTGGTGATAAATTGCCACCATTAATTATCAATCGTGGAAAAAATACATGGGACCAATGGATGTCGGAACTAGGTTACGAAAACACATCTTATGCTTATAAATAA
- Protein Sequence
- MVRHYKRKTTTKYDLETLKKAVDEVRTGKINSYQAARKYNIPRTTICDRVSGKRGVVKDTRGPPTVINTENELKLANGLRVMEKYGFGLTSKETLELVSIHVSENKYLTPFKNNQPGYDWFASFKKRHNLSLKKPQAVEMSRKVACDPFIVNEYFDILEEVLNELGLKGRPEKVWNLDESSFGNDPDKTKVVGARGFASTRTIASSGKDNVTILFTASAVGDKLPPLIINRGKNTWDQWMSELGYENTSYAYK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00985941; iTF_00985945; iTF_00874393; iTF_00875234; iTF_00875230; iTF_00162529; iTF_00162532; iTF_00162533; iTF_00162534; iTF_00162535; iTF_00162536; iTF_01076392; iTF_00162537; iTF_00162538; iTF_00162539; iTF_00162540; iTF_00876084; iTF_00831126;
- 90% Identity
- iTF_00985941; iTF_00985945; iTF_00831126; iTF_00162529; iTF_00162532; iTF_00162533; iTF_00162534; iTF_00162535; iTF_00162536; iTF_01076392; iTF_00162537; iTF_00162538; iTF_00162539; iTF_00162540;
- 80% Identity
- iTF_00985945; iTF_00985941;