Bsel011297.1
Basic Information
- Insect
- Boloria selene
- Gene Symbol
- -
- Assembly
- GCA_905231865.2
- Location
- HG993153.1:2624525-2624839[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2e-12 2.4e-09 37.4 0.0 3 40 16 54 15 58 0.92 2 2 4.7 2.7e+03 -1.2 0.0 26 35 86 95 84 97 0.83
Sequence Information
- Coding Sequence
- ATGCCTCGACATTGCAAAAGAGAAACAACACCGAGATATGAACTTGAAAATCTTCGACGTGCTGTACATGATGTTAGGAGTAAACAGCTTACTTTGGGCAAAGCTGCCATAAAATACTCAGTGTCAAAAACAACATTGTTTAAGCAAGTTAAAAAAGAAATATTTGAGAAACCACAAAAAGGTCGGTACCCTGTCTTTAATAAAAATCAGGAAGACCAGTTAGAAAGGTACATACTGGATTGCTGTGAGTCTTTTTATGGCATAACACCAAGTTCACTACGAAAGATTGCTTATACGTTTGCTGAAGCTAACTAA
- Protein Sequence
- MPRHCKRETTPRYELENLRRAVHDVRSKQLTLGKAAIKYSVSKTTLFKQVKKEIFEKPQKGRYPVFNKNQEDQLERYILDCCESFYGITPSSLRKIAYTFAEAN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -