Basic Information

Insect: Boloria euphrosyne
Gene Symbol: THAP6
Assembly: GCA_951802675.2
Location: OX637899.1:1271452-1284909[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.063 6.3 8.3 0.5 1 23 322 344 322 344 0.98

2 11 0.00034 0.034 15.4 7.0 1 23 351 373 351 374 0.95

3 11 0.059 5.8 8.4 1.8 1 23 378 400 378 400 0.97

4 11 0.061 6 8.3 2.1 1 23 405 428 405 428 0.97

5 11 0.018 1.8 10.0 0.2 1 23 432 455 432 455 0.93

6 11 0.01 0.99 10.8 0.5 3 21 469 487 468 492 0.93

7 11 1.1 1.1e+02 4.4 0.3 2 23 545 567 544 567 0.94

8 11 0.0078 0.78 11.1 1.1 2 20 583 601 582 604 0.89

9 11 0.0003 0.03 15.6 0.3 1 23 610 632 610 632 0.98

10 11 2.3e-05 0.0023 19.1 2.2 1 23 638 660 638 660 0.97

11 11 4.4e-05 0.0044 18.2 4.1 1 23 666 689 666 689 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.063	6.3	8.3	0.5	1	23	322	344	322	344	0.98
2	11	0.00034	0.034	15.4	7.0	1	23	351	373	351	374	0.95
3	11	0.059	5.8	8.4	1.8	1	23	378	400	378	400	0.97
4	11	0.061	6	8.3	2.1	1	23	405	428	405	428	0.97
5	11	0.018	1.8	10.0	0.2	1	23	432	455	432	455	0.93
6	11	0.01	0.99	10.8	0.5	3	21	469	487	468	492	0.93
7	11	1.1	1.1e+02	4.4	0.3	2	23	545	567	544	567	0.94
8	11	0.0078	0.78	11.1	1.1	2	20	583	601	582	604	0.89
9	11	0.0003	0.03	15.6	0.3	1	23	610	632	610	632	0.98
10	11	2.3e-05	0.0023	19.1	2.2	1	23	638	660	638	660	0.97
11	11	4.4e-05	0.0044	18.2	4.1	1	23	666	689	666	689	0.95

Sequence Information

Coding Sequence: atgcgcTGTTGTATTCCTTCGTGTAAAAATGATTCGAGACATTTATCTAAGTCGGAAGGAATTACTTTTCATgtctTTCCAACAGAACCAAATATAAGAGCATCTTGGCTGAAAGCTGTTGGTAAAGATGAATGGTCCCTTCGAGATAGGAGTGTGGTGTGTTCTGAACACTTTCTCTGTGAAGATTTGTATGAAACTAAGAATGGATTGAGGAAAGTTAGAATTGGTGCAGTGCCTGTAGTTCAGGTTTGCAGAATCTGCCTCGGTACCGATAGAAAACTTTTTTcactcaaaaaatataatttggagcAAGCCTATGAATGTCTTACAGGAATCTCGCCCTTCAATGACAGTTTACCACAATGTCTATGTTCAGAATGTGCTCAGAGACTGTCGAATTGTAATAAATTTCGTAATAAAAGTCTGAAAGCATATACTTTGATGTTGGATTTGGTTGAAAAAGAGgatattATaacattagaaaatttaaaattaatcaaccGGGAAGAGAACCAGTTATTGTCAAGTTTAAGCCAAAAACTATTCACTCCAGACCATTACGATATATCAATAGATGAAAGCACAGAAGCTCAAAACATAAAAACAGACAAATTAGAAATCGATATTTTAGAAGAAGTTAAGAGTGAGAAGAATGAAGAAGAAGATATATTTGTAGAAACCAACGATGACTTCAGAACTTCAGACACGGAAATACCAAAAGAATACTCAACAGATGACAGTCTGCCATTGGAGTGTcaaaggaagaagaagaagacgaaGATAAGAGAAGAGAAGAaagtgaagaagaagaaggaggaCGTGCCAAAGATTGACAGACGTCGTAAACCTTTTTTGAATGATGAATTAAATGAGACTCTCTTTACGATAACTGATTTGACGTTTGAAGAACAAGTAGCAGAAATTCAGAAAAGGCAGGAGTCGTcgaattataaaaattcattGTACAAATGTATGGAGTGTTTCAAAGGTTTTTTGGATGAAGACGCGTACAATGGGCACATGACTAGGCATACTAATCAATGCGGAGAATACGAATGTGATATATGCAAGACTCATTTCAAACACCCTCACGCGTTACGGAAGCATATAACCGCGCACCACACGCAAAGGTTCAGTTGTAACCAGTGTCCGTACGTCACTACGCATAGacaaacagccaggTTACACGAGAGATGGCATAAGGGCACTAAGTACAAATGCCCGCACTGTCAAGACGAATTCGTAAAATTCACAACGTATATGGGCCATATACGTATAAAGCATCCGTCCGACTTCGTCTGTGCTCTCTGCGGGTATACATTCGTTAGTGAAAAGGGTATTGAGTTGCACAAGAAGTTGAAGCATCGACTTGATGATGGATTGATACCAGAAGACGGGCCTCTCTGTGAACTCTGTAACGTCAAATTCGTCTCTCAAGACGCGTACAGACGACATCTGCACGTGTCGGCGAGGCATAATAATAGTGACTCagATTCCAAGGATTCGAACAGAGCCAGAAAAGGTAGGAGATCGAAGGAGATAAAAGATGTGGGCGGCAAGAGAGATAGAAGTAGCGAAGGGAGTGAGAGAAAAGCGTATCCGAGTCAAGTTAGAAAAGCAGAAGGACCTATACCATGTGAACAGTGCGGTATACAATTGGAAGATTCTAGAGCCTACCATGGTCACTTCAGAAGAATGCACCCGGACAAGAACCGAACCAAGTACCCCTCAATGAAGTCGCCGTGTATGTGCGAAGTGTGCGGGCGGATGTTCCAGAGCTACGCCCTCCTAAAAGACCACCGCTGGACGCACACGGGCGAGCGGCCGTTCTCGTGCGAGGCGTGCGGGAAGGCGTTCCGCATGCGCCAGCGCCTCGTGGCGCACCGCCGCGTGCACTCGCCGCGCCGCCAGTACGCATGCGCGCTCTGCCCGAAGACCTTCTCCACGCACAGCAACCGCCAGCGGCATATGTTTATCCACACAGGATTGAAGCCGTTCAAATGTGAGATGTGCGGGAAGTGCTTCAAACACGCCAGCGAGAAGCGTGCTCATATAACTTACGTGCATCTCAAGAAGCCGTGGCCGAAGCGCGCGCGGGCGAAGCGCAGGGAGAGACCGGGTCAAGCCCAAGAAATGGAAGAAAGTGGAAGTGAAGTCCACATGGCACCGGTTTGGCCTCAGCAAGATCTCAAGTCTGCGTACTGTCATCTTAGAGTGTAA
Protein Sequence: MRCCIPSCKNDSRHLSKSEGITFHVFPTEPNIRASWLKAVGKDEWSLRDRSVVCSEHFLCEDLYETKNGLRKVRIGAVPVVQVCRICLGTDRKLFSLKKYNLEQAYECLTGISPFNDSLPQCLCSECAQRLSNCNKFRNKSLKAYTLMLDLVEKEDIITLENLKLINREENQLLSSLSQKLFTPDHYDISIDESTEAQNIKTDKLEIDILEEVKSEKNEEEDIFVETNDDFRTSDTEIPKEYSTDDSLPLECQRKKKKTKIREEKKVKKKKEDVPKIDRRRKPFLNDELNETLFTITDLTFEEQVAEIQKRQESSNYKNSLYKCMECFKGFLDEDAYNGHMTRHTNQCGEYECDICKTHFKHPHALRKHITAHHTQRFSCNQCPYVTTHRQTARLHERWHKGTKYKCPHCQDEFVKFTTYMGHIRIKHPSDFVCALCGYTFVSEKGIELHKKLKHRLDDGLIPEDGPLCELCNVKFVSQDAYRRHLHVSARHNNSDSDSKDSNRARKGRRSKEIKDVGGKRDRSSEGSERKAYPSQVRKAEGPIPCEQCGIQLEDSRAYHGHFRRMHPDKNRTKYPSMKSPCMCEVCGRMFQSYALLKDHRWTHTGERPFSCEACGKAFRMRQRLVAHRRVHSPRRQYACALCPKTFSTHSNRQRHMFIHTGLKPFKCEMCGKCFKHASEKRAHITYVHLKKPWPKRARAKRRERPGQAQEMEESGSEVHMAPVWPQQDLKSAYCHLRV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00247268;
90% Identity: iTF_00212560;
80% Identity: iTF_00212560;