Basic Information

Insect: Boloria euphrosyne
Gene Symbol: B0310.2_2
Assembly: GCA_951802675.2
Location: OX637899.1:1255123-1268784[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 8.9 8.8e+02 1.5 0.3 1 10 367 376 367 389 0.84

2 11 0.0023 0.23 12.8 0.8 1 23 396 419 396 419 0.93

3 11 0.38 37 5.8 0.2 1 23 423 445 423 445 0.92

4 11 0.0041 0.41 12.0 1.0 1 23 450 473 450 473 0.98

5 11 0.0028 0.27 12.6 0.7 1 23 477 500 477 500 0.96

6 11 7.3 7.2e+02 1.8 0.1 2 21 513 532 513 533 0.84

7 11 0.21 21 6.6 0.2 3 23 586 607 585 607 0.96

8 11 0.0093 0.92 10.9 0.5 2 20 623 641 622 644 0.92

9 11 1.9e-05 0.0019 19.4 2.5 1 23 650 672 650 672 0.99

10 11 6.4e-05 0.0063 17.7 2.5 1 23 679 701 679 701 0.98

11 11 3.9e-05 0.0038 18.4 0.6 1 23 707 730 707 730 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	8.9	8.8e+02	1.5	0.3	1	10	367	376	367	389	0.84
2	11	0.0023	0.23	12.8	0.8	1	23	396	419	396	419	0.93
3	11	0.38	37	5.8	0.2	1	23	423	445	423	445	0.92
4	11	0.0041	0.41	12.0	1.0	1	23	450	473	450	473	0.98
5	11	0.0028	0.27	12.6	0.7	1	23	477	500	477	500	0.96
6	11	7.3	7.2e+02	1.8	0.1	2	21	513	532	513	533	0.84
7	11	0.21	21	6.6	0.2	3	23	586	607	585	607	0.96
8	11	0.0093	0.92	10.9	0.5	2	20	623	641	622	644	0.92
9	11	1.9e-05	0.0019	19.4	2.5	1	23	650	672	650	672	0.99
10	11	6.4e-05	0.0063	17.7	2.5	1	23	679	701	679	701	0.98
11	11	3.9e-05	0.0038	18.4	0.6	1	23	707	730	707	730	0.92

Sequence Information

Coding Sequence: atgcgTTGTTGTGTCGAAAATTGTGCAAATGATACtcgtaaaataacaaaaagtcaTGGAATCACCTTTCATATgtttcCTAAGGAGTTAAACATCAGAAACTTATGGCTAAAAGCCCTTGGTATGCTAGAGTGGGAGCCAAAAGAGCGCAGtGCAGTGTGCTCAGAGCATTTCAAACAAGATGCATTCTATGAAACCAAATGTGGTTTGCGGAGAATTAAAATTGGGGCTGTGCCTCTTaatCATTCATCTGAAGATATGGATACACCAGCCACATTGAGGgtGTGCAGAATCTGTTTGGTGATGGATGTTAAAATGTATCACTTGGCCGAACGTAAATTGACTGTTATATATGAACAAGTTACTGGTGTTCCGataaatgtAGAAGATAAGTTACCCCAAATGTTGTGTTGGGAGTGTGTTGCCAGATTGACGTCGGCGAACCGTTTTAGGGAGAAAGCTTTAAAAACTCAAGGACTGCTTACAAATAAATTGGATATGGATAGatatttaacattaagagatataaaatcaataagtagAGCTCAAAATCACTTAAAATCAACACTTGGTTTAAAAGTCTATGAAGTTAATGATAATGATTTACatattaatgaaaatgaaattgtCAAAACGGAAAAGATAACCGAATTTAATGATGGCGATGATATAgcgtattatgataataatgataatttgcCAGAAATTAATGATGAATCAGAAATTAATGATATCAAAAATATTGAAGTGGAAATTAAACATGAAGTCgataatgagatattttttgaaGAATATCCAGCGATATTCGATAGTGATGATGATAGAGTGTTAAGTGAAGTGTGCAAGAAGAAGCCTAAAGTGAAAAAGAAGAAGTTGAAAATAGAAAAGAAGGTGAAAGAAGTGAAGGTTAAGCAGAAGACAGAAGATGACGAGAATCCTACTACAACTATGGACAAgtacaaAAATTCCGACGTGAAAAGACGAAAAACGACAGATGGTTTAGACGAATCTCTCTTCACGATAACCACATTGACGTATGAAGAGCAAATAGCGGAAGTGGAGCGAAGGCAGGACACTTCGTCGTACAAGAACGCGCCGTTCAAATGCACGCTGTGCTATAGGGGGTTTCTGATACGGGACCGATATGACGCTCACGTAGTGAGGCATAGTGATCAAAGCGGTGCTTATGAGTGCTTCATATGCAAGACCAGATTGAAAACGGCTCGCGCTTTACGAAAACACCTCACGGCGCAACACACTGAGAAGTTCAGCTGTAAAGGCTGTCCGTTTGTCACAAgaaatagGGGTGTAGCGCGAGAACATGAAAAATGGCACGCGGGGACTAAATACCAGTGTCCACACTGTCCCAGTGAATTTGAcAAATTAACAACATACATGGGTCATATAAGAATAAAGCACGTATCAGATTTTGTGTGCGAGCTCTGCGGGTACACGTTCGTTAGTAAAAAGGGGATTGATGTGCACAAGAAGAAAAAGCATAGATTGGCGGATAAAAGTGTGACATTAGAAGGACCATATTGTGAAGTGTGCGAAGTGAAGTTCATATCAGAAGAAGCGCATTCCAGACACCTGAAGCTATCTTCACGTCACAGCAGTGATAATGATCCGAATCGTATCAGGAACGACTCGCAGAGCATGAACACGGAGCGCAGCGGGCGCGTGATGCGGCGGATCGAGCGCCGCCCCGTCGTGCacgcgcgcgcgcccgccgccgacGCCGCCGGCGCCGTCGCCTGCGAGCAGTGTGGCATCCAACTGCGGGACCTCCGGCTGTACGCGCAGCACTTCCGCCGCGCGCACCCCGACAAGAACCGAACCAAGTACCCCGCCATGAAGACGCCCTGCATGTGCGAGCAGTGCGGGCGCATCTTTCAGAGCATGGCCCTTTTAAAAGATCATATGTGGGTTCACACCGGAGAGAAGAGATTCAAATGTGACAGATGTGAGAAGAGCTTCACCCAGAAAACCAACCTGGTGTTCCACATGAGGGTTCACAGCGCGTCGAGACCGACATACGAATGCCCGATATGTGGGAAGCATTTCGCTTTCTTCAATAACCGAAGGAGACATATGTTTATCCACACGGGACTAAAGCCGTACAAGTGCGACACGTGCGGCAAGTCCTTCACAACAGCGGGCGAGCAGCGCGCGCACGTCGACCACGTGCACCTCAAGAAGCCCTGGCCCAAACGCGCGCGTGCCAGACCTGATGCCTGGCCGCACTCCCTCGAGGACTGA
Protein Sequence: MRCCVENCANDTRKITKSHGITFHMFPKELNIRNLWLKALGMLEWEPKERSAVCSEHFKQDAFYETKCGLRRIKIGAVPLNHSSEDMDTPATLRVCRICLVMDVKMYHLAERKLTVIYEQVTGVPINVEDKLPQMLCWECVARLTSANRFREKALKTQGLLTNKLDMDRYLTLRDIKSISRAQNHLKSTLGLKVYEVNDNDLHINENEIVKTEKITEFNDGDDIAYYDNNDNLPEINDESEINDIKNIEVEIKHEVDNEIFFEEYPAIFDSDDDRVLSEVCKKKPKVKKKKLKIEKKVKEVKVKQKTEDDENPTTTMDKYKNSDVKRRKTTDGLDESLFTITTLTYEEQIAEVERRQDTSSYKNAPFKCTLCYRGFLIRDRYDAHVVRHSDQSGAYECFICKTRLKTARALRKHLTAQHTEKFSCKGCPFVTRNRGVAREHEKWHAGTKYQCPHCPSEFDKLTTYMGHIRIKHVSDFVCELCGYTFVSKKGIDVHKKKKHRLADKSVTLEGPYCEVCEVKFISEEAHSRHLKLSSRHSSDNDPNRIRNDSQSMNTERSGRVMRRIERRPVVHARAPAADAAGAVACEQCGIQLRDLRLYAQHFRRAHPDKNRTKYPAMKTPCMCEQCGRIFQSMALLKDHMWVHTGEKRFKCDRCEKSFTQKTNLVFHMRVHSASRPTYECPICGKHFAFFNNRRRHMFIHTGLKPYKCDTCGKSFTTAGEQRAHVDHVHLKKPWPKRARARPDAWPHSLED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00458480;
90% Identity: iTF_00159906;
80% Identity: iTF_00212557;