Basic Information

Insect: Boloria euphrosyne
Gene Symbol: -
Assembly: GCA_951802675.2
Location: OX637895.1:7241383-7254685[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.12 12 7.4 0.8 1 23 346 368 346 368 0.97

2 10 2.6 2.5e+02 3.2 0.1 3 23 392 413 390 413 0.91

3 10 0.15 14 7.1 0.3 2 23 436 457 435 457 0.93

4 10 0.026 2.6 9.5 0.9 1 23 461 483 461 483 0.96

5 10 0.0028 0.28 12.5 1.7 1 23 489 512 489 512 0.85

6 10 0.019 1.9 9.9 0.9 2 23 519 541 518 541 0.91

7 10 1.4e-06 0.00014 22.9 1.3 1 23 547 570 547 570 0.98

8 10 0.0001 0.01 17.1 1.4 1 23 576 598 576 598 0.98

9 10 2.3e-06 0.00023 22.2 2.0 1 23 604 626 604 626 0.99

10 10 5.5e-07 5.5e-05 24.2 2.7 1 23 632 654 632 655 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.12	12	7.4	0.8	1	23	346	368	346	368	0.97
2	10	2.6	2.5e+02	3.2	0.1	3	23	392	413	390	413	0.91
3	10	0.15	14	7.1	0.3	2	23	436	457	435	457	0.93
4	10	0.026	2.6	9.5	0.9	1	23	461	483	461	483	0.96
5	10	0.0028	0.28	12.5	1.7	1	23	489	512	489	512	0.85
6	10	0.019	1.9	9.9	0.9	2	23	519	541	518	541	0.91
7	10	1.4e-06	0.00014	22.9	1.3	1	23	547	570	547	570	0.98
8	10	0.0001	0.01	17.1	1.4	1	23	576	598	576	598	0.98
9	10	2.3e-06	0.00023	22.2	2.0	1	23	604	626	604	626	0.99
10	10	5.5e-07	5.5e-05	24.2	2.7	1	23	632	654	632	655	0.96

Sequence Information

Coding Sequence: ATGGCTTTAATTAAGAATAACGGGGATATAATAGACCCAGGTCTGTGTAGATGCTGTAGAGCTATAAAGAAATGTAGGATTTTGACTTCAGAGTATACTTGGATGGAGAAGAAAGAGGTTTATGCGGATATGATTATGGATTGCTTTGGTATTCTTTTATCGCATGTGGATGAGGATGTGAAAGATAGTGGTATTTGTGCAACGTGCGTTGTACGATTGCGTGGAGCGAGTGCCTTTCGCAATCAAGTGTTACAATgtgaagaattatttttaagggCTAAGTTGGAGGATAAAGACGAGACAAAGAAGGAGACAGAGATTGAGCTGAAATCGGAACCGAAAGATGATTGTAGCGAAAACAGTATCGACGACCATCGGGATGTAATATCTGTGGATTGTCCATCGCGTGCCTTTGAACGTGCAAAAGAAGCCGAATCTTCAATGATTGACGCTGGTAAGGATGAAGCAGCTATAGCTCTGGAATGCGGAAGCGTGAGTCCTTCTGGAATACCATCAATACCCGTAACAGCTGATGCTGCTTGGGGGAAACGatcatataaaacaaatttttcatCTGCAGCAGGCGTGGGGGCGATTATAGGATTAAATACGGACGAGAAGCCTCTTAAAAAGGAATATGTAGACGAGAAACCTAAAGCTGAAGAACTCAAAGATATGCCCAAAGCTATGGAGATCGATGAGAATGAGGAAGACGAtgatgttgatgatgatgattaccATGATGATTACTCCGGTTCATCATCAGATTCAGACAAGCCGATTATAAGGAAAGCGAAagtcaaaaaaagaaaatcacctAAAACAAATGTTACACCGAAGAAGAAGTTGTTGAAAAGTAAAGGGACCAAGTTGAAGAAATCAGCATCACCCAAAAAATTATCGCCACGATTAAAGAAACCTCCAGTCGAAAAGAAGAATACATACGATCGAGACCTCGATTGTATGTCAGAAGAGAATCTCCTCACGATCATCCAATATTCCTACGTATGCCCGTTTAAAAACCGAAGGAACAACTACTACTGCTTCTACTGCAAGGACTATTACCCAAAACCTGAAGACCTGAGGGAGCACACCGTCACCCACGACACCAAACCATTCCAACTCCTCATGGGGTACCGGAAGATGCCTAAAGTTGACATAACCAGGATTGACTGCCGCTTATGCCCAATGAAAATCACCGATTTAGAAGTCTTCAAGAAACACATAGACCAAGTGCAtggaaagaaaatatattttgaagcgCCAGATAAGATGCTGTTGTACAAATTAACGTGGAATGACTTAGTTTGCCTCATGTGTAAAGACACCTTCGAAGACTTCAACACTCTCAACACCCATATGGTGGAACACTTCAGTAACTTTACATGTGATATATGTGGTTTGTGCTTTTTAGAAAAACCTCGGCTGGATGCTCATTTAAAACGTCATAAGGACGACGAGCGCCATACTTGTGAAGTGTGCGGGAAAGTGTTCAAATCTAATCATTACAAGGACATGCATGTCGATATAGTGCATAAAAAGAAAGCAATTATACGTTGTCCTCAGTGCGATGAGTGTTTCATGTCTTACGCgttgaaaaataaacatttgacCGAAGCCCACGGTCAAAAGCGTACGTATCCGTGTAATTTGTGTGACAAAGTGTATAACAGGCAGAAAACGTTGACAGAACACCAGCGGAGGAACCACCAGAAGGTTCTGAAGCACCAATGTGAGTATTGCGACCAAAGATTCTATTTGCCATCCCGTTTGAAAGAACATATAGCAACGCATACCGGTGAGAGAAATTTTAGATGTGAATTTTGTGATAAAAGTTATCCTCGGCTCAAGTCTTTGCAGTATCATATTCGTACACACACCAATGAGAGGAGGTATAGATGTCATATATGCGGTCAAGCGTTCATACAAAATGCTAGTTTGAAATCCCACATAAAAAGTCATCACCCCGAATGTGACATCGAGGGTTGCTACTTTTAA
Protein Sequence: MALIKNNGDIIDPGLCRCCRAIKKCRILTSEYTWMEKKEVYADMIMDCFGILLSHVDEDVKDSGICATCVVRLRGASAFRNQVLQCEELFLRAKLEDKDETKKETEIELKSEPKDDCSENSIDDHRDVISVDCPSRAFERAKEAESSMIDAGKDEAAIALECGSVSPSGIPSIPVTADAAWGKRSYKTNFSSAAGVGAIIGLNTDEKPLKKEYVDEKPKAEELKDMPKAMEIDENEEDDDVDDDDYHDDYSGSSSDSDKPIIRKAKVKKRKSPKTNVTPKKKLLKSKGTKLKKSASPKKLSPRLKKPPVEKKNTYDRDLDCMSEENLLTIIQYSYVCPFKNRRNNYYCFYCKDYYPKPEDLREHTVTHDTKPFQLLMGYRKMPKVDITRIDCRLCPMKITDLEVFKKHIDQVHGKKIYFEAPDKMLLYKLTWNDLVCLMCKDTFEDFNTLNTHMVEHFSNFTCDICGLCFLEKPRLDAHLKRHKDDERHTCEVCGKVFKSNHYKDMHVDIVHKKKAIIRCPQCDECFMSYALKNKHLTEAHGQKRTYPCNLCDKVYNRQKTLTEHQRRNHQKVLKHQCEYCDQRFYLPSRLKEHIATHTGERNFRCEFCDKSYPRLKSLQYHIRTHTNERRYRCHICGQAFIQNASLKSHIKSHHPECDIEGCYF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00213859; iTF_00723415; iTF_00248401; iTF_00247491; iTF_00160128;
90% Identity: -
80% Identity: -