Basic Information

Insect: Boloria euphrosyne
Gene Symbol: -
Assembly: GCA_951802675.2
Location: OX637883.1:10715665-10724964[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0065 0.64 11.4 0.0 2 23 142 164 141 164 0.95

2 17 0.062 6.1 8.3 0.6 2 23 395 417 394 417 0.97

3 17 0.017 1.6 10.1 0.1 1 21 425 445 425 446 0.94

4 17 0.014 1.3 10.4 0.3 2 23 456 477 455 477 0.94

5 17 1.9 1.8e+02 3.7 0.7 1 23 493 516 493 516 0.86

6 17 0.1 10 7.6 1.4 1 23 525 548 525 548 0.93

7 17 0.46 46 5.6 1.4 3 23 624 645 622 645 0.91

8 17 1.9 1.9e+02 3.6 0.8 1 23 650 673 650 673 0.89

9 17 3.5e-05 0.0034 18.5 1.1 1 23 679 701 679 701 0.97

10 17 1.3e-06 0.00013 23.0 1.2 1 23 708 730 708 730 0.98

11 17 8.5e-05 0.0084 17.3 2.3 1 23 735 757 735 757 0.96

12 17 0.00045 0.045 15.0 2.6 1 23 763 785 763 785 0.99

13 17 1.7e-06 0.00017 22.6 1.4 1 23 791 813 791 813 0.98

14 17 8.1e-05 0.0081 17.4 1.5 3 23 821 841 820 841 0.98

15 17 0.00014 0.014 16.6 0.6 2 23 849 871 848 871 0.97

16 17 0.0023 0.23 12.8 0.3 1 23 876 898 876 898 0.98

17 17 0.22 21 6.6 4.0 1 23 904 927 904 927 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0065	0.64	11.4	0.0	2	23	142	164	141	164	0.95
2	17	0.062	6.1	8.3	0.6	2	23	395	417	394	417	0.97
3	17	0.017	1.6	10.1	0.1	1	21	425	445	425	446	0.94
4	17	0.014	1.3	10.4	0.3	2	23	456	477	455	477	0.94
5	17	1.9	1.8e+02	3.7	0.7	1	23	493	516	493	516	0.86
6	17	0.1	10	7.6	1.4	1	23	525	548	525	548	0.93
7	17	0.46	46	5.6	1.4	3	23	624	645	622	645	0.91
8	17	1.9	1.9e+02	3.6	0.8	1	23	650	673	650	673	0.89
9	17	3.5e-05	0.0034	18.5	1.1	1	23	679	701	679	701	0.97
10	17	1.3e-06	0.00013	23.0	1.2	1	23	708	730	708	730	0.98
11	17	8.5e-05	0.0084	17.3	2.3	1	23	735	757	735	757	0.96
12	17	0.00045	0.045	15.0	2.6	1	23	763	785	763	785	0.99
13	17	1.7e-06	0.00017	22.6	1.4	1	23	791	813	791	813	0.98
14	17	8.1e-05	0.0081	17.4	1.5	3	23	821	841	820	841	0.98
15	17	0.00014	0.014	16.6	0.6	2	23	849	871	848	871	0.97
16	17	0.0023	0.23	12.8	0.3	1	23	876	898	876	898	0.98
17	17	0.22	21	6.6	4.0	1	23	904	927	904	927	0.97

Sequence Information

Coding Sequence: ATGGCTTCTGACGAGTCAGATGATGAACCTCTGTCTAATTTGGCGGCTGCCAAGAAAAACGACCCCGATAATTTTGATTATGAACCACCAAGTGAGAGCAGTGATGAGGAaccaaagaagaagaaaaagaaaggcCCACCACCGGCAAAAAAGCTAGGCGTGACAATAAAGTTTCatcgaaaattaaataatatgatagGACCTGGTGTAATAGAGCGACCGGCGGATGTGTGGCTTTATCTAAAGGATCTTAACCCAACGGGGCCTTATAGCTGTTTACTCTGTTCTGATTGGTTTATTAACAGATCAAAAATGATATTACATTATGCTTTAAATCATAAGAAAGATTTTTGTGGTATTTGCAGATACTTTGTACCAGAAAGAGATGCTTGGTGGGAACATGAAAAATTTCATACACCATGGCCTTGTTCCCAATGCGTGGAGACCTTCCCAACAGAAGTCTTGCTACGTAACCACCTTAGTAGTGTTCATAATTTAGTGCATTGTAGACTCTGCCATTTTAGAGTTTCTGCTGATGAAAATTATAGTTCACATTTGTTTCAAAAACACAATGTTACCAATGCTTCTTGTCAAAATGATGATTTATTTTGGCACTTAGATTATGATGGAGATGATAAATTTATGTGTTCTCTGTGCTCAAAAACAGACCTATTGTCATCCACTTTTTTCGGACATTATATGGGCTATCATCATTTTACTCTTAAATGTTTGACCAATGTCATTGCTGGCAAAAATACTCCATTTACAGTAGATGGGGCCGATGTTACTGACCGTTTTATTGATGAACAATTAAAAGGACATGTTAGGCTTGGTTATGTTGATTTAACACCTAAGACCGAACCACCTACTAGTAATGTAAAGGTTGTACCAGTAGAAATTGTTATGCCTACTATTAAAAAAGAGGTACCAAGTGACGTTGAAGAACAAAATAAACCAGTTAAATCAGACGTAGTAGTGAAAGATGAGAATAGTCAAAATAATGAAGTATTAGACTACAAAGGTGAAGAAGATTTTGATGTTACAGTGACAGAAATGATTGTTATTGAAAGATCCTACTTTGACTATATAAATCAGCTCCTTTTGAGTGTTAATGAAGACAAAGTACCTGAAATATCTCATATTGAGTATGATAAGCTTAAGTCAGATTatcttaataatgtaaaatgtcCGCTATGTAAAACTAAATTGGAAACAGTACAATCATTTGCTAcacatatgaataaaatgcaCAGTGTTAAATCAGTGCCTATGTATTCCTGTCGCGTTTGTGTGGCAACTTTTGATACTTACAACGATTTGACAAATCATATTGCCACTGAGTTGGGTGATTTTGATGATCTATGGATTTGTCAGTTTTGTGACAAGGAATTTGATAACCGTGAGGCAACAAGACAGCATTTATCGGAACATTACAACTGCTTAGACTATGAAAATTGTTTTAGTCCACATGTAGGGTTCAAATGCAAGTATTGTTCTACATTGTTCTGGAATGAGCCAGATAGGGAGACACATCAGTTAAGAGTGCATTACAACAAATACAAGGAACACTTTTATAAATGTGAGCCCTGTTCTAAAACTTTTGGTGATAAGGTATGGTATCTACATCATTACATAGAGAAACACTGTGAAGATGAAGACAAGGCCTATCTTATCAAGTGTTGCCTTTGCTGCGTAGTTCTCTCAGATATAGACGAGATGAGGAGTCACTTTGCCTCAAATCACTCGGAGGTCCGCAAGTTGTATTGTTCCCTGGAACCCTGCCTGTATAAGCCTTTGAGTCATAGGAAGTCGTTTAAACTTCATGTAAAGATGATCCATGGTACTCCCAAGCAAGAGAAGACAGTCCATTGCAACGTGTGTCAGCGAGAGTTTGCCAGTTCTCGCGCCTGTGCGACCCACATGGCGCAAGTGCACGGTCCTGGAAAATTCAAGTGCAAACTGTGTAAAGAAGTATTGCAGACTGTTGATGAGAGAAAACTCCACTATCTCCTCCGCCATCCTGGACGTCATCCCTTTGAGTGTGCGGACTGCGGGAAGTCCTTCCAGTACAAGTCGTCGCTATACATGCACAGGCAGGACCACCAGCCGAACAAACAGACGTACACATGCAGTTATTGTGGGAAGTCGTTTGCGAAGAAGGACTCGTTCCGCGAGCACGTGCAGATCCACGAGGGCCCGCGCCACGCGTGCTCGTACTGCCCCATGCGCTTCGTGCAGCGCTCCAACATGCTGCGCCACGAGCGCCGCCACACCGGCGAGCGCCCCTACCGCTGCGCGCACTGCCCCCGCTCCTTCGCCGACAAGGGCGCTTGCACTGCGCATACTAGaacACATTCTAAGGACACATCCTACGCGTGTCTGTACTGCGGGCAGACGTTCGTGCAGAAGTCCAAGCTGACATATCATATACGCAAACACACGGGAGAAAATCTAGAAGCGTGTCCGGTTTGCTCCAAGCTGTTCACGAGCGCGTGCTCGTTGCGCGAGCACATGAAGACGCACGTGGAGAAGAGAGCAATTGTCAAATGTCCGCTGTGTGATAAGAGCTACCAGGACGAGCGCTACATGCTGCGGCACCTGCGCACGTCGCACACGCGCTCGCAGTTCAGCTGCCCGCTGTGCCAAAAGCTGCTAACAAGTGCAGCCGGCCTTCGACATCATGTCATTACTCACAGCCCGCTTAATACTTTTAGATGCAAATGCTGTCCAAAATCGTATGCAGTGAAGCGAACTATCGTCAAACATCTCAGAAAACGTCATGGCTTGAAAGGCGGTGAATTAAACCTAAAAGATTTCTACACTCGGCTAGAACCAAGAGAGTGCCAGTTGGACTTAGACGAAGCCACAATGACTACAATATTCGGACCTCCCAAGAAAACAATGCCAGAAGTACTGATTGCTGACTTTGTAACATTCTCGAAGAAAATAACATTTGCACAGAATGTGGAGAATAATAATACTGATGACACTGAAGATGATAATGAAGCGGGCAAAGAAAGTGATAATGTCAGTAACAGTGAGCAAGAAGAGCAGCCGCCACAGATAAAACAAGAAGTTGTGAGTGGTGGTGAAGAAGAACTAGAACCTACAGATTTTGTTAGTGTCAAAATAGAACCCATAGAAGATGAGCATATGGAATAA
Protein Sequence: MASDESDDEPLSNLAAAKKNDPDNFDYEPPSESSDEEPKKKKKKGPPPAKKLGVTIKFHRKLNNMIGPGVIERPADVWLYLKDLNPTGPYSCLLCSDWFINRSKMILHYALNHKKDFCGICRYFVPERDAWWEHEKFHTPWPCSQCVETFPTEVLLRNHLSSVHNLVHCRLCHFRVSADENYSSHLFQKHNVTNASCQNDDLFWHLDYDGDDKFMCSLCSKTDLLSSTFFGHYMGYHHFTLKCLTNVIAGKNTPFTVDGADVTDRFIDEQLKGHVRLGYVDLTPKTEPPTSNVKVVPVEIVMPTIKKEVPSDVEEQNKPVKSDVVVKDENSQNNEVLDYKGEEDFDVTVTEMIVIERSYFDYINQLLLSVNEDKVPEISHIEYDKLKSDYLNNVKCPLCKTKLETVQSFATHMNKMHSVKSVPMYSCRVCVATFDTYNDLTNHIATELGDFDDLWICQFCDKEFDNREATRQHLSEHYNCLDYENCFSPHVGFKCKYCSTLFWNEPDRETHQLRVHYNKYKEHFYKCEPCSKTFGDKVWYLHHYIEKHCEDEDKAYLIKCCLCCVVLSDIDEMRSHFASNHSEVRKLYCSLEPCLYKPLSHRKSFKLHVKMIHGTPKQEKTVHCNVCQREFASSRACATHMAQVHGPGKFKCKLCKEVLQTVDERKLHYLLRHPGRHPFECADCGKSFQYKSSLYMHRQDHQPNKQTYTCSYCGKSFAKKDSFREHVQIHEGPRHACSYCPMRFVQRSNMLRHERRHTGERPYRCAHCPRSFADKGACTAHTRTHSKDTSYACLYCGQTFVQKSKLTYHIRKHTGENLEACPVCSKLFTSACSLREHMKTHVEKRAIVKCPLCDKSYQDERYMLRHLRTSHTRSQFSCPLCQKLLTSAAGLRHHVITHSPLNTFRCKCCPKSYAVKRTIVKHLRKRHGLKGGELNLKDFYTRLEPRECQLDLDEATMTTIFGPPKKTMPEVLIADFVTFSKKITFAQNVENNNTDDTEDDNEAGKESDNVSNSEQEEQPPQIKQEVVSGGEEELEPTDFVSVKIEPIEDEHME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00248386;
90% Identity: iTF_00160123;
80% Identity: -