Basic Information

Insect: Boloria euphrosyne
Gene Symbol: -
Assembly: GCA_951802675.2
Location: OX637883.1:5718212-5728858[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.00039 0.039 15.2 0.2 2 23 137 158 136 158 0.93

2 11 0.00033 0.033 15.4 1.7 1 23 164 186 164 186 0.96

3 11 6.5e-05 0.0065 17.7 0.3 1 23 282 304 282 304 0.98

4 11 5.7 5.6e+02 2.1 0.2 2 23 311 333 310 333 0.84

5 11 0.00082 0.082 14.2 0.1 3 23 391 412 389 412 0.90

6 11 0.0025 0.25 12.7 0.2 1 23 427 449 427 449 0.96

7 11 9.3e-06 0.00092 20.3 0.2 1 23 476 498 476 498 0.98

8 11 0.00061 0.06 14.6 0.2 1 23 504 526 504 526 0.97

9 11 0.00035 0.034 15.4 0.3 1 23 532 554 532 555 0.95

10 11 0.062 6.1 8.3 0.2 1 23 568 590 568 590 0.97

11 11 0.21 21 6.6 0.1 2 20 749 767 748 770 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.00039	0.039	15.2	0.2	2	23	137	158	136	158	0.93
2	11	0.00033	0.033	15.4	1.7	1	23	164	186	164	186	0.96
3	11	6.5e-05	0.0065	17.7	0.3	1	23	282	304	282	304	0.98
4	11	5.7	5.6e+02	2.1	0.2	2	23	311	333	310	333	0.84
5	11	0.00082	0.082	14.2	0.1	3	23	391	412	389	412	0.90
6	11	0.0025	0.25	12.7	0.2	1	23	427	449	427	449	0.96
7	11	9.3e-06	0.00092	20.3	0.2	1	23	476	498	476	498	0.98
8	11	0.00061	0.06	14.6	0.2	1	23	504	526	504	526	0.97
9	11	0.00035	0.034	15.4	0.3	1	23	532	554	532	555	0.95
10	11	0.062	6.1	8.3	0.2	1	23	568	590	568	590	0.97
11	11	0.21	21	6.6	0.1	2	20	749	767	748	770	0.91

Sequence Information

Coding Sequence: ATGGAAGGTGAAGAATTTCATCTTCAATGGGAGGAGGAAGATGTTAAGCCAACTATAGTAGCAAATGAAGAAGTAATATGTGGCCTTGATAATGTGCAAAGTGAAGCATATGGAAACATTaCCACTGAAGAAATGATAGCTGACACTGACCATATAGCAgcacaaaatttagtttatttatcaCAAGATGTTGGTTACACGGAAAGTGCTGAACTAGCAGAAGATCCCAATGTGGAGTGTGTTACGGAAGAAGTTGTAACAGATGACTGGGTCATCTCTGGTGGACAGGAAAGAGTGGAAGTGCCTTTAGAACATTTAGCAAATCCTATTCAAGACATTAAAGAAGAGAATGACATTGATGTCCCACTACCAACAGATCAAGATGAGTACACAGCAATGCGGCCGTGGCCGTGCGACTTCTGCTCGCGGCGGTTCCGCAAGAAGGCGGCGCTGATGAACCACATGGTGGCGCACCAGAACGACCGGCCGCACGCCTGCAACCTGTGCGGCGTGCGCTACGTGCGCAAGTGCGACCTCATGGCCCACCTCAAAGTGCACGCCTACGTGCCCGACCCCGACCCGCTTGATTACCAGCAAGAAGCAGTTATAGCACACACACCTAtagtaaaaacaaagaaaaaaagagGCAGACGGAAAAAGAATCCAGAACCTGTTGAGaacggCGTGTGGGAGCACATGACGTCGGCGCGCACGCAGCAGTGGtcgcggcgcgcgcgcacgccgccgcccgcgccgccctccCCGCCCTCGCCGTCGCTGTCGCCGTCGCCACCGCCGCGCTCGCcgtcgccgccgccgccgcccgcggaCCCCTCGCGCCCCTTCGTGTGCCGCCACTGCGGGGTTGGCTTCGCGAGGGAGAAGGCGCTCCAGTCACATGCTAGgGTGCACGGCGGAGACTCCCCGGTGGAGTGCGGCGAGTGCGGCGAGCTGTGCTGGTCGCGCGAGGCGCTGCGCTCGCACGCCGCGCAGCGCCACCCGCacgcgcgcgcgcccgcgctTGCCAAGCGCGAACCCGACTACGATGACTGCAATTCAGGCGACGACATGGAGTTCCGGCTGTCGCCCGCGGCGCACAGCGGCAGCGAGGCGGGGTCGGCggggcgcgcgcgccgccccgAGCGCGACGTGCGCGGCCCCGAGCTCTTCTGCGGGCACTGCGGCGTGGCCTTCCAGCGCGCCGACCTGCTGCGCCGCCACGTCGCCGCCGCGCACAGCTACAAGCGGCACGACAGCACGAGCACGTGGGAGCAGGAGCACACGTGCGACGTGTGCGGCGAGAGCTGCCCCGACGCGCTGCAGCTGCTGGCACACGCCGAGCGGCACGCGGAGCGCCCCCGAGCATCCAGATTAAAAAGAATGGGTAGAGGTAAAAACAGTAGTGCCTCAAATAATTCGCGACAGTTCCCGTGTAGAGAATGCGGCAAAGTGTTCGGTTCGCGCAGTTCGCAGCAGATCCACATCCGCATCCACACGGGCGAGCGCCCCTACGCCTGCCGCTTCTGCTGGAAGGCGTTCGCGGACGGCGGCACGCTGCGCAAGCACGAGAGGATACACACTGGAGAGAAACCGTACGCGTGCGCCGTGTGCCCGCGCGCCTTCAACCAGCGCGTGGTGCTGCGCGAGCACGTGCGCTCGCACCACTCCGCGCCCGACCGCCGCGCTAACGgTGGGTTTCAATATAGCTGTGTAGTTTGTGGACGAGCAATGCACTCGAGCACTGAGTTAGTTCAACATCTTATTCAACACTGTGATGAAAATACAGCCATGAAAAGGCAACCTCAGaGTGGACCAAGAAAGTATAAGCGGCgacgaaaaataaaaaccgaagAGTCACCAGTTCGACGCGAGTGGGAGATGCCGTCGCCCTCTCCCGCGCGCTCGCCCTCCCCCGCGCCGTCCCGCTCGCCCTCGCCGCCGCCctccccgcgcccgcgccgcgcgccgcgcgcctccccgccgcgccgccgccgccgccgcgtgccgccgccgccgcgccccaAAATGATACACACTGAGGAGCCACGCCCAAGGACTAAAcagGTACGAAGTCGGAGACCCCCGCGGCGTCCAGCGGATGATCTGCGAGCAATAGGGCCGCGCTCCCCCTCGTCGGCGCCCCCCTCGCCGGCGCCCCCCTCGCCCTCCCCGCCGCCGCCCTCGCCGCCGCCCTCCGCCGCGCCCGACGCCGCGCCCGACGCCGCGCCCGACCAGGACTCTCTGAAGTGCGCCATGTGCTCGCAGGAGTTTCCGCATCTGGACGCGCTGCTGCTGCATGTGCCAGTGCATATATGA
Protein Sequence: MEGEEFHLQWEEEDVKPTIVANEEVICGLDNVQSEAYGNITTEEMIADTDHIAAQNLVYLSQDVGYTESAELAEDPNVECVTEEVVTDDWVISGGQERVEVPLEHLANPIQDIKEENDIDVPLPTDQDEYTAMRPWPCDFCSRRFRKKAALMNHMVAHQNDRPHACNLCGVRYVRKCDLMAHLKVHAYVPDPDPLDYQQEAVIAHTPIVKTKKKRGRRKKNPEPVENGVWEHMTSARTQQWSRRARTPPPAPPSPPSPSLSPSPPPRSPSPPPPPADPSRPFVCRHCGVGFAREKALQSHARVHGGDSPVECGECGELCWSREALRSHAAQRHPHARAPALAKREPDYDDCNSGDDMEFRLSPAAHSGSEAGSAGRARRPERDVRGPELFCGHCGVAFQRADLLRRHVAAAHSYKRHDSTSTWEQEHTCDVCGESCPDALQLLAHAERHAERPRASRLKRMGRGKNSSASNNSRQFPCRECGKVFGSRSSQQIHIRIHTGERPYACRFCWKAFADGGTLRKHERIHTGEKPYACAVCPRAFNQRVVLREHVRSHHSAPDRRANGGFQYSCVVCGRAMHSSTELVQHLIQHCDENTAMKRQPQSGPRKYKRRRKIKTEESPVRREWEMPSPSPARSPSPAPSRSPSPPPSPRPRRAPRASPPRRRRRRVPPPPRPKMIHTEEPRPRTKQVRSRRPPRRPADDLRAIGPRSPSSAPPSPAPPSPSPPPPSPPPSAAPDAAPDAAPDQDSLKCAMCSQEFPHLDALLLHVPVHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00824972;
90% Identity: iTF_00247451;
80% Identity: -