Beup026982.1
Basic Information
- Insect
- Boloria euphrosyne
- Gene Symbol
- ZNF526
- Assembly
- GCA_951802675.2
- Location
- OX637898.1:8391306-8422619[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.72 71 5.0 0.0 1 16 287 302 287 304 0.84 2 19 0.14 14 7.2 0.3 2 23 462 483 461 483 0.88 3 19 0.0002 0.02 16.2 0.0 1 23 494 517 494 517 0.97 4 19 0.027 2.7 9.4 3.8 1 21 598 618 598 619 0.93 5 19 0.034 3.3 9.1 3.8 2 23 662 683 661 683 0.95 6 19 2.4 2.4e+02 3.3 1.1 1 23 695 719 695 719 0.89 7 19 0.00015 0.015 16.6 0.6 2 23 726 749 725 749 0.96 8 19 0.15 15 7.1 0.5 1 23 755 777 755 777 0.93 9 19 0.0021 0.2 13.0 3.3 1 23 783 805 783 805 0.98 10 19 0.92 91 4.6 0.1 2 19 816 833 815 836 0.89 11 19 0.029 2.9 9.3 0.1 1 23 914 936 914 936 0.98 12 19 2.4 2.4e+02 3.3 7.4 1 23 943 965 943 965 0.95 13 19 0.00082 0.081 14.2 2.0 1 23 1000 1023 1000 1023 0.95 14 19 0.011 1.1 10.6 2.0 1 23 1030 1053 1030 1053 0.97 15 19 0.012 1.2 10.6 0.1 2 23 1075 1097 1074 1097 0.95 16 19 0.11 10 7.6 4.0 3 23 1115 1136 1113 1136 0.95 17 19 0.00039 0.038 15.2 0.1 2 23 1146 1167 1146 1167 0.98 18 19 0.0002 0.02 16.1 0.1 1 23 1173 1195 1173 1195 0.97 19 19 7.1e-05 0.007 17.6 1.3 2 23 1202 1224 1201 1224 0.95
Sequence Information
- Coding Sequence
- ATGTCTGAATCACCACCACCTTTAGTTCTGTGCATGGAGGATATAAATGGGAAGGAGGTGGAGCTGAGAATTGAGAAAAATGACAGCTTTCAGATATTTTTGGATAAATCTAAggcTCTTCTTGGATATGACATGGACTTGAATTCCATAACTGGTAGCCAGCCAATATCCCTCAATGATAATGCATATACATTTCTATTAAACGCTGAGCAAAACTTGCCAGATTCTACCCTAAATCCGACTAATTTCGATCTAGACACTAACCAAAACGGCACAGATGATTTGGTGTACATTCTAGATGATGGCACACAAATACGCGCTTCCCAGATACACTTCGATAATGAAGATCCTCTAACTGACTTAACCTTAGAAAAAATACCTTTCGTTAAGTATACAGATGGAGTAGATGAATTAGAAGAAAACGATGTAGAGATTGGTGATGttaaagatattaatataaCCAGTCCCGTATCAAATAAAGATAGTCCAAGATGCAATTTTGTTAATAGTCTTCCATTTAAACTAGTATGTAGCAATGCTTCAAATTTCGAAACACAATTTACTAAATATCTTGAAGAAAGATGTAAAACGAACCCAACATTGCATTcggggaataaaaataatacacccAAAAGTttgaataatgaaaattataagcCCTATGAAAATATAGATCGCAATGATCGTTTTACTCGAGAAGATATCTTAAACATGTTTAAAAACTCTCCTGTGACTCCTCTACCGTATGATGGTCAAAGTTCCGAAAAACGTAAACATGTTCGCAAAACAGACCCATCAAGACTAGGAAGCAAGAACTGGAATGCCAAACCTTTAATAGATATAGATGCGAAAGACAAACATGTTTGCTCCATCTGTGGCAAAATTGTTGATAACAATAACAAGCTTTATATATTTGACAAAGAAGACCAGATGCTCCACAGATGTGAGCTGAAGAAATCTACTCAACTCAAAATCATATGCGAGATGTGCTTAACCGAAAACTTTGTTGCGAGCAGATTCAAAAGTCCGGACGAATCTTTAAACAGCGATGAATATTTGGTCATAAAAAACAATCAACAGTATATCTTCCAGAAAACCACGTCTgctgtttttaaaaattcatacaaaCCAAAgataaatgatgaaattaaagAAACTTCAGAATTTGTTAAAGTTGAGATTGGGCCTGATGGTGAAATAGTCACTAAACCCATAGATACCGATGTTAAATCTGATGACGTCATAATAATAGATGACAAAAAAGACAGTTCTAGTGACGTAGAGATTTTAGACCCTAAACCGGAAATTGATATAGAAAATATTGATGAAGACGAAAATGTGAAAGAATTTTTAGGCAAATATCAATGTGATAGTAAAGAATTGAAATGTAGgtTTTGTAACAAGGATTTTAAGTCAATATCCGAAGTAATAGAGCACGGAGAAGACCATAAACACGATTTAGAAGATGAAGAGGTCGTATTTCCTTGTCCTCTATGCGATTATGGTTATGCGAACTTCAAATGGTTGAAAGCACATCTCAGAGTGGCCCATGAAACTGTTAAGAAAGATCAAAATGCTATAGAAGAAGCTAGCGgtACAAAAGAAAAACAAGTTGATGAACAGTGTACTGAGAATATGGCGAATGAAATGACTTGTATAACTGAAGTAAAACAAGAATGCTTGGATAGCGACGATTCCATATGGATAGTGCAAACTGGAGACAATGATGACGAATTACACAGCTTGTTGAAGGCAAAAGAAGAAAACACAACTGTCAATGATCTGAAAAAACACAAGTGCTTTAAATGCAGCAAGATATTTCCTAACTCGGAGAGTCTCTCCGTTCATAAGTGTAGAAAGAGAGGAAGAAAAAGAAAGTCAATGTCAAAAGACGAATCTGTCATATTAGTTCCGTCTCATGAGGATTTTATCAAGagAACACGTAAGAAGAAAACCCGTGAATCAAGTGAGTCACAAATAGTGACGTGTCATAATTGTAACGAGTCCTTCACATCAAAAGTGAGGCTAAAATTTCATATGCAATTCCACGATACAACAAACCTGTTGACAAGCGATGGTCAATACAAATGTACGGAATGTGAAGATGCCAAGTTTCCGACGGAGACGGAATTGTTCGACCACGTCCACTTTCAGCATGACAAGCAGAAACGATGGCAGTGTCCTGTCAAAGGGTGTGGGAAGACTTTCTTTCTAAGggCAACACTGACAAAGCACAGCCGCACGCACACGGACACGCGGCGCTACGTGTGCGTGACGTGCGACAAGCGCTTCCTCGACAAGCAGACGCTGGACGAACACAGTGTCACACACCTACAGATAAAACCTTTCCAATGCCACATATGCCTCAAACAGCTGACTCGAAGGTCTCGACTTCGGATGCATTTGAGGGCTCATGAAGAAGAACTGTCACCGGCCTTAGTACTCGTGTGTGCCATCTGCTTTAGAGCATTCCGAGACCATAATGATGCTCAGGAGCATGCGACGAAATCAACCGAATGTATAGCCGAGTTCACGAAAGATCTCAAGGAGGAGACTGAAGCGAGTGAACAACTGTCGCCCACGAGTGGGATTGTGAGGCACAGCGTCAGAGTGGTGGaataCCCACAACTGACTCAAGGAATAGAACGACAAGTCGATAACGAGATGAGTGAAGCGATGCTCTCGAAGTTAGACAATGTTGCCAGAAATATCATACGCGTCGTCAATGTGGAGAAGGCTTTTAGATGTGAATACTGTGAAGATGTATTCTATTTGGAAGACGCTTTAAACAACCACAGAATTATTCATAAGGGAATAAAAAACCCTTTCACGTGCCACATTTGTAAAGTTACCTTCGCAACTTACTCCAGATGCACAACGCACAAAACTACCCACGGCTTTTACAAGCGCAGTGCGACCGAGAGCCGCGGCGAGGGTACATCCGGCCCCGCCAGCGCCGGCATCCTCGGCTACGGGGGGTTCCCCGTCGTCAAGCACTTCTTGTGCGAGgACTGTGGGCGATCGTACTTGCACTGGACGTACCTGCAGGTGCACCGCCGCACGAAGCACGCGAATGAGAATTACCTGTTCAAATGTAACCAGTGCGAGATGACGTTTCCGAATACCTGGAGTGTGACATATCATAGGAAAAAAACTCACAATAAAAATGGTCAAGATGAAAATGGCGGATTCACCAAAATACTTCGCGAGAATTATcgGATCCCATGTCGCGATTGCGACGCCGTCTTGCCAAATAAAACTGAACTTTATAGGCATAGAAAGAATGAACATAGCGATGAATCAATGCAAATTGTAAGAcaaggtGACGGTCAAACAACGATTTGTAACCAATGTGGACACAATCTGCACAACCATTACGCCTTACAGAAGCATATCAAAGAAGTACACGGAAGTTCAGATAAAAGACAATCGAACACATGTCCAGTGTGTTCTAGAACATTCCGGTCCGCGTCAGTTCTAGACGAGCACGTGCGCGTGCACACCGGGGAGAGACCCTTTCCGTGTGATGTGTGCGGGCTCGCCTTCAGACGCTTAACAGCAATGAAAAACCATAGACTAATCCACAATGGCGTTAGACCATGGATGTGTACGAGGTGCCCGAAACGATTTCGCATCAAATCCGACTTGAGGACACACATTCGGCTCAAACATCCAGCACATATAGCTGTTATAGAAATTGAAGGCCTACACTGTTCCACTGAAGACGTTTACCAGCATCTTGCAGTCAATAACATACCGCAAGATAAAGTTATTGAAGTCACTATGATATCTTTCATGAAGgatACCATGAACATTGTGCCGAACTCGATGAAAGCACTCTCTCTATTGAGTGATGTCCCGAAAACTCAAATCATCGGTCAAAAACCTACGCCCGATCAAAATGAACTTATCCGACATCAACGTTCAGCTGCTGTTGCAAGATGGCGGTCTAGTGAATGCGAATCAAATGGTGCAACTGGATATTAA
- Protein Sequence
- MSESPPPLVLCMEDINGKEVELRIEKNDSFQIFLDKSKALLGYDMDLNSITGSQPISLNDNAYTFLLNAEQNLPDSTLNPTNFDLDTNQNGTDDLVYILDDGTQIRASQIHFDNEDPLTDLTLEKIPFVKYTDGVDELEENDVEIGDVKDINITSPVSNKDSPRCNFVNSLPFKLVCSNASNFETQFTKYLEERCKTNPTLHSGNKNNTPKSLNNENYKPYENIDRNDRFTREDILNMFKNSPVTPLPYDGQSSEKRKHVRKTDPSRLGSKNWNAKPLIDIDAKDKHVCSICGKIVDNNNKLYIFDKEDQMLHRCELKKSTQLKIICEMCLTENFVASRFKSPDESLNSDEYLVIKNNQQYIFQKTTSAVFKNSYKPKINDEIKETSEFVKVEIGPDGEIVTKPIDTDVKSDDVIIIDDKKDSSSDVEILDPKPEIDIENIDEDENVKEFLGKYQCDSKELKCRFCNKDFKSISEVIEHGEDHKHDLEDEEVVFPCPLCDYGYANFKWLKAHLRVAHETVKKDQNAIEEASGTKEKQVDEQCTENMANEMTCITEVKQECLDSDDSIWIVQTGDNDDELHSLLKAKEENTTVNDLKKHKCFKCSKIFPNSESLSVHKCRKRGRKRKSMSKDESVILVPSHEDFIKRTRKKKTRESSESQIVTCHNCNESFTSKVRLKFHMQFHDTTNLLTSDGQYKCTECEDAKFPTETELFDHVHFQHDKQKRWQCPVKGCGKTFFLRATLTKHSRTHTDTRRYVCVTCDKRFLDKQTLDEHSVTHLQIKPFQCHICLKQLTRRSRLRMHLRAHEEELSPALVLVCAICFRAFRDHNDAQEHATKSTECIAEFTKDLKEETEASEQLSPTSGIVRHSVRVVEYPQLTQGIERQVDNEMSEAMLSKLDNVARNIIRVVNVEKAFRCEYCEDVFYLEDALNNHRIIHKGIKNPFTCHICKVTFATYSRCTTHKTTHGFYKRSATESRGEGTSGPASAGILGYGGFPVVKHFLCEDCGRSYLHWTYLQVHRRTKHANENYLFKCNQCEMTFPNTWSVTYHRKKTHNKNGQDENGGFTKILRENYRIPCRDCDAVLPNKTELYRHRKNEHSDESMQIVRQGDGQTTICNQCGHNLHNHYALQKHIKEVHGSSDKRQSNTCPVCSRTFRSASVLDEHVRVHTGERPFPCDVCGLAFRRLTAMKNHRLIHNGVRPWMCTRCPKRFRIKSDLRTHIRLKHPAHIAVIEIEGLHCSTEDVYQHLAVNNIPQDKVIEVTMISFMKDTMNIVPNSMKALSLLSDVPKTQIIGQKPTPDQNELIRHQRSAAVARWRSSECESNGATGY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723483;
- 90% Identity
- -
- 80% Identity
- -