Beup018801.1
Basic Information
- Insect
- Boloria euphrosyne
- Gene Symbol
- -
- Assembly
- GCA_951802675.2
- Location
- OX637889.1:2870037-2872427[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.1e-09 1.5e-06 28.6 0.1 4 43 15 54 12 56 0.88
Sequence Information
- Coding Sequence
- ATGTCAACTGCAAAAAAAAAGCGTGCCTCATGGACACAAAGTGATTTAGAAGCTGCTGTTACTGCTGTTCGTCTGAACAGGTTATCCAGTTATAAAGCAGCTAGTAGTTATAACATCCCTAGAAGAACATTACGAGATTATTTAAAGAGTGGAATGTCCAAACTAAATTTAGGTAGAAGATCGATATTTACCAGCCAACAGGAACAAGATTTTGTGAAAAGGATTATTAGATTTGCAGATTTGGGGATTCCGTTAACAGCAAAGATAATACGAAAACAAGCATTTGTGTTTTGTGAGACATATAATATTGCTAACAATTTTAACAAGCAGTTAGGTATTGCTGGACGAGACTGGCTTAAGTTATTCCTGAAGAGAAACAGCAATGTAGCAAAACGCAAAGCCCAATTTCTAAATCAAGCCAGAGGCCAAAAACTCAATAAAGCAATCGTTTCACATCATTTTAAAGAAGTGGAAAAATTATATGATGAACTAGGAATCCGTTACAATCCAGAGAGGCTTTACAACATGGACGAAAAAGGTTGCCGTTTAACGATGCACAAACAACCTACAGTAATTGCTCAGAAAGGAACAAAAAGAGTTCATTTACAAGCATCTGAACATGGCGAAAATGTCACGATCGTGGGTTGTGCAAATGCGTTGGGGAATTCAATACCGCCGATGATTATATTTAAGGGCGTTCGAAGGAAGCCAGAATTCGAATTAAACCTGCCTCCAGGTTCAGCTGTTAGAATGGCTCCGAAGGGAAGCATGACTACAGAGATTTTTATTGACTTCTTAAGACATTTTGCTAGATATAAGACCTCGGGAAACTGCCTTCTTATATTTGACGGGGCAAAGTGTCATTTAGATTACAGAATTGCTGAAGAAGCGGATATACTTGGTATCACACTATACTGTCTACCCTCAAATACAACCCACGAGTTGCAACCGCTTGATAAAGCCTGCTACAAACCTTTCGAGAGTTACTGGGACCAAGAAGTTcttcaacatttttataaaacccATGCACAAAAATTAACTCGCCCCgatttcaataggattttgtCGAGGATATGGTCAAAATGTATGACACATGAAAACATAACTAGTGGCTTCCGAGCAACAGGATTGTATCCTTTAAATCCAAATGTTTTGCCTGAAAGCGCTTTCGCACCCTCAGTATTAACGGAACAACAGGCACCTCTTGTTGAAGATAGAAGAGAATCTTGCGATATACGAGTATCTCCAATGGCAGTTACCAATGAAGACCTCGAAAGTTTGATGAATGTTGGGCAGGCAACCCCTACCACTGCATACTTAACACATGGAGTCTCACCGTCTCTAATTGAAAGTTTGAACACTTTTGACATTGAATTTTCTGATCTACAAGTCACCCCACCGCGTTCACTGATTGAGTGTCGATCTCCACATGTCACTCCACCACGTTCAACAGTTGTTTGGTCCGCTCCAGAACACACTCCGCAACGTTCTCTTATTATGAGTCCAACTCCACCTGTTATTCCTCCTGAGTCATATATCAAACCACATCCTTTGCAATTAACTCCGTCACACAAAAAAGGTCAACCCTGTTATAGATCGCCGGTTGCTTCTACAAGTGGCTTGCAAACTGTAAAGAGACTTGTATGTTATAGTTCATCTACTGATGCTTCCGAATCTGAACATGTTTCTGACTGCGAAATGATTACGAAATTTATCACAAGACCACTTATTCAACAATGTCCACATGCTTCTGATGATGAAGATAGTTCCGACAGTAAAATTATgacaaaatttatcaaaaggTCGCGTGTAGAGCAATCAGTACGTATATATTCATCAGACTCGGGTTCTGAAGCAAATCATGAAGACGACGTACCATTAGCTCAGTTATCACAAAAATCGCAGTTTCAACTATTTATGCCCACACCGAACTATGCAATCACCAAGAAAAGACCCCGTCGAAAGGCTTTAAATTATAAAGGCCAAAGAGTAAATAAAGATCTGTTTAATGATCCGAAAGACGTGAAAAAGAAAGCAGATAAAAGTGAAGAAGCTAAACTGGCCAAAGGTAAAACTAAACCAAAGGAAATGAAAAAGAAATCAGACGATGATAAAACAGCtaacaaaagaaaattaaaagaatacaatataaaaacaaaaaaactaaataaggaGATTATAGCAGAAACTAAAGAGAGAAAAAAAGGAATCAGCAAAAACAAGGGTAAAGAAAACAAAAGTGGGGAATGGTATTGCTACGCTTGTTATGAGGATCGGATTGCCGATATGAGGTCATGTTTGAATTGTACAAAATGGTACCACGAGGAGTGTATTGGTTTGACAAAAAATGACATAGAAGAATTTAGATGCCCTGATGGTTGTGACTTGTGA
- Protein Sequence
- MSTAKKKRASWTQSDLEAAVTAVRLNRLSSYKAASSYNIPRRTLRDYLKSGMSKLNLGRRSIFTSQQEQDFVKRIIRFADLGIPLTAKIIRKQAFVFCETYNIANNFNKQLGIAGRDWLKLFLKRNSNVAKRKAQFLNQARGQKLNKAIVSHHFKEVEKLYDELGIRYNPERLYNMDEKGCRLTMHKQPTVIAQKGTKRVHLQASEHGENVTIVGCANALGNSIPPMIIFKGVRRKPEFELNLPPGSAVRMAPKGSMTTEIFIDFLRHFARYKTSGNCLLIFDGAKCHLDYRIAEEADILGITLYCLPSNTTHELQPLDKACYKPFESYWDQEVLQHFYKTHAQKLTRPDFNRILSRIWSKCMTHENITSGFRATGLYPLNPNVLPESAFAPSVLTEQQAPLVEDRRESCDIRVSPMAVTNEDLESLMNVGQATPTTAYLTHGVSPSLIESLNTFDIEFSDLQVTPPRSLIECRSPHVTPPRSTVVWSAPEHTPQRSLIMSPTPPVIPPESYIKPHPLQLTPSHKKGQPCYRSPVASTSGLQTVKRLVCYSSSTDASESEHVSDCEMITKFITRPLIQQCPHASDDEDSSDSKIMTKFIKRSRVEQSVRIYSSDSGSEANHEDDVPLAQLSQKSQFQLFMPTPNYAITKKRPRRKALNYKGQRVNKDLFNDPKDVKKKADKSEEAKLAKGKTKPKEMKKKSDDDKTANKRKLKEYNIKTKKLNKEIIAETKERKKGISKNKGKENKSGEWYCYACYEDRIADMRSCLNCTKWYHEECIGLTKNDIEEFRCPDGCDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00745576; iTF_00745582; iTF_00448975; iTF_00448976; iTF_00685364; iTF_00685363; iTF_00685365; iTF_00685366; iTF_00124183; iTF_00745592; iTF_00745583; iTF_00445054; iTF_00445053;
- 90% Identity
- -
- 80% Identity
- -