Beup021684.1
Basic Information
- Insect
- Boloria euphrosyne
- Gene Symbol
- Ppp1r8
- Assembly
- GCA_951802675.2
- Location
- OX637892.1:3758868-3765363[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1e-09 5.1e-07 30.1 0.0 3 35 27 59 25 67 0.92
Sequence Information
- Coding Sequence
- ATGGTGCGAACCTACCAGAGAAAGTTCACTAACTCACGAAATGGCAAGAATTATCTACCTTACCAGAGTTATTCGGTTGAAGATTTACAAAAAGCGATAGAAGCAATAAAAAATGGGACACTGCAGTTAAAAGAGGCGGCTCAAAATTACAATATTCCTAAGAGCACATTAAGCCGAAAAAGCCGAAATATAAACTGCACACAAGAAAAGGCCGGACATCCAACTCTATTTTCAAAAGACGAAGAGATGGTGTTTGTagaatatatacaattattgaGTACTTGGGGGTTCCCTGTTGATTCCACTGACCTACGAGTATTTGCACAAAAATATTTGGACAAATTGGGAAAAAACGTCtacagtttaaaaaataatatgcctggAGTAGACTGGGCACGAAATTTCATAAATAGGCATAGATCAGAAATTTCTAATCGTCAAGCGTCAAATATATCTAGCGAGCGCGCCAAAATCTCACCAGCTATAATAGACGACTTTTTTTCCAATTATGAGAAATCTATTGAAGGAGTCTCTCCCGATTGTCTCATCAATTATGATGAAACAAACCTGACCGATGATCCGggtaacaaaaaatatctatttaaaagaGGTTGTAAATACCCTGAAAGGGTAATCAACAATTCAAAGACGTCTGTTTCTTTGATGTTTACCGGCACTGCGGATGGGCAGTTATTACCCGTTTACATAGTATATAAAGCTGATCATTTATGGGATCAATGGCTGGAGGGAGGGCCTCAAGGAACCAGGTATAACCGGTCAAAAAGTGGATGGTTTGATACCACATGTTTTGAGGACTGGTTTAATACCATCATAGTACCGTATGTAAAAACAAAACCAGGTCGAAAAGTGATAATAGGAGACAATTTATCTTCACATTTTTCCCAATCCGTGTTACGTACTTGTCAGGAGTTAAATATTACGTTTGTTTGCTTACCTTCCAAAACCACCCATTTACTCCAGCCGTTGGATGTTGCTTTTTACGcacctttaaaaaaatattggcgCGATGTATTAACACAGTGGAAAAAGAATGAAGGTTTTAAACACAAAACTCTAATTAAAAGTTGGTTTCCAAATTTACTAAGCAAATTGGATAAAAAGTTAAGAGAAAATGGGTTGGAGTCCACCAATATCATTGCTGGGTTTAACAAATGCGGCTTATATCCCATTAATTCAGAGCGACCGAAGTCACGGTTACCACAAAAAACAATTATCTCGAAAGAACAGATACAAAATACAGCATCTACAGCTATTGTAGAAATTTTGCAAGATATGAGAAATCCCACTGCGACCCTTGAACAGCCtaaacgtaaaaaaaaatgCAGCGTTCCACCTGGAAAGAGTATTACAGCGGAAGACTTGCGACTAGAACAAACACAATCAATTAAATCTAAGCGgaataaaagaacaaaaaaaggAATTGCAAAAGGTGACAGGCAATATATGAGCTTAGTCAATACCAATTGCATTTCACGTGAAAGAGACCGAAGTCATAGCATCGATTCTGACCTCACCAGAGACATTGAAAGAGACAAAGGAGACAACCTAACGCAACCCATTGCAGGTTCTTCGAGACTTTGTAAAAGGAAGAAACAGACAACACCTAATATAGAAAATAGAGGCAATGAATCAGACACTTCATATGTGAGCTCACCGGAtgataaaaaaagtgaaaaggAATCAATGttaattacacaaaataataaaccaaGAAGTCAGCATTCAGTATCAAGTTTTAAAGGCAAAGGTAAAGGCAAGAAAACTAAACTTAAAGTTGATCATACAAATAAGTTAGAAAAAGAAGATTCAGAAATAATGTACAGGTTAAATGCTACCACTACTGTCGCAAAACTCACAAGGAAAAAAAGGATAAGAAAGTCTAGCGATTCCACCACTAGTGTTTCAGATATTATGAGTGTGTACGACGACTCGGACCTGTTAGATGTTGATTTTTTTAACGATCAGAGCTCAGATTTTAATTCTTGCTCAGAGAGAAAATTACACGGAACAGAAACTTGtgaatcaaatataataaaagatgaaaatatactaaaaatccCTACAACTCATGTAATTGATGATGACAAGAAAAATGAGAAGAAAACTGAACAACCCAGTGACAAACTTTTCTTCTTCGACCACGAGAACACAGGTGAAGAAGTtgttattgataattttaatgaCAAAGATGTTATTACAAACGAAGATGTTACtaacaataaagaaaataagatcGGGAAAAGACTAACTATAATTAAGGAAGAAAATaatctGACAGAATTTAATACAGCACACAATAGAAGGATCTCCATGCTGGGCATCTCTACTGATGATGGAAGTGATGTGATTAAGccACCAACTGGTACAAAGAGATCAGCATCAATGTCCGGAGGTATTGCCAAGAAGCAGAAACGCAATGTATCTTTCAATGAGGAGGTGGACATCATCAACCCAGAGGATATAGATCCGACTGTGGGCAGATTCAGGAACTTGGTCCGCTCAACAATAGTACCGAATGCGAATGCACCAACTAGAAAGTTGAAATTGCAAAGTGCGGATGAAAGTCACCACCACCATTCACTCAGACTACAAGAGATATCCAGAAGCAATAACTTGTATTCCGATCTACCGGCACCCAGCTCACATCTCAGTCTTATTGGTGCTagATTGGGACTGTCATTACCGAACCCAGCTCCCGATGTAGAGTTAGAGGGTCCCGAGCCACACCACAACATACACCCCCCTCTACCACATGCAGTGGCAGAAGAACCAGCTTCATCCAACGAGCCCAAAAAGAAGAAATATGCAAAGGAAGCATGGCCGGGGAGGAAGCCCGGGCTCGCTCCAGTGTGA
- Protein Sequence
- MVRTYQRKFTNSRNGKNYLPYQSYSVEDLQKAIEAIKNGTLQLKEAAQNYNIPKSTLSRKSRNINCTQEKAGHPTLFSKDEEMVFVEYIQLLSTWGFPVDSTDLRVFAQKYLDKLGKNVYSLKNNMPGVDWARNFINRHRSEISNRQASNISSERAKISPAIIDDFFSNYEKSIEGVSPDCLINYDETNLTDDPGNKKYLFKRGCKYPERVINNSKTSVSLMFTGTADGQLLPVYIVYKADHLWDQWLEGGPQGTRYNRSKSGWFDTTCFEDWFNTIIVPYVKTKPGRKVIIGDNLSSHFSQSVLRTCQELNITFVCLPSKTTHLLQPLDVAFYAPLKKYWRDVLTQWKKNEGFKHKTLIKSWFPNLLSKLDKKLRENGLESTNIIAGFNKCGLYPINSERPKSRLPQKTIISKEQIQNTASTAIVEILQDMRNPTATLEQPKRKKKCSVPPGKSITAEDLRLEQTQSIKSKRNKRTKKGIAKGDRQYMSLVNTNCISRERDRSHSIDSDLTRDIERDKGDNLTQPIAGSSRLCKRKKQTTPNIENRGNESDTSYVSSPDDKKSEKESMLITQNNKPRSQHSVSSFKGKGKGKKTKLKVDHTNKLEKEDSEIMYRLNATTTVAKLTRKKRIRKSSDSTTSVSDIMSVYDDSDLLDVDFFNDQSSDFNSCSERKLHGTETCESNIIKDENILKIPTTHVIDDDKKNEKKTEQPSDKLFFFDHENTGEEVVIDNFNDKDVITNEDVTNNKENKIGKRLTIIKEENNLTEFNTAHNRRISMLGISTDDGSDVIKPPTGTKRSASMSGGIAKKQKRNVSFNEEVDIINPEDIDPTVGRFRNLVRSTIVPNANAPTRKLKLQSADESHHHHSLRLQEISRSNNLYSDLPAPSSHLSLIGARLGLSLPNPAPDVELEGPEPHHNIHPPLPHAVAEEPASSNEPKKKKYAKEAWPGRKPGLAPV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00212378;
- 90% Identity
- iTF_00212378;
- 80% Identity
- -