Beup021253.1
Basic Information
- Insect
- Boloria euphrosyne
- Gene Symbol
- -
- Assembly
- GCA_951802675.2
- Location
- OX637891.1:9045968-9055537[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4e-05 0.019 15.5 0.0 10 33 128 151 127 161 0.77 2 2 8.8e-05 0.043 14.3 0.0 18 33 343 358 336 368 0.78
Sequence Information
- Coding Sequence
- ATGGAAGAAGATAAGGTAGACGTGGCGAGTATTAACCGCGGATCACGCAAAAAGCAAAGAAAGGAACGAAGCAAGCGGCGAGTACAAGATGACAAatATAAAGACAAAGACCCCTTATGTCTTAATTTTTTCGTCCCGTGTGTGCACAAACCTTCATCGGCTTTTAAGTGCATAAAACTGAAAGAGCAAGATATCTCCCGGAATCGAAAACTGTTCTACAACAATAAAGAGAAACAAGTCATGCCTTTACCCAAAACACCAATTCAAGATAGCTTTTATGCGCGGCAAATacgcttttataatttttgtgttgtgAATGTGGATGGAAGGGACCCAGATTTTTATTGCTGGACTGAAGACATGGCTGGAAGAGGTTCAGTGGAAGTCATAAGAACAGAAAATAAAAGCATCAGAGAGGCCTGTCGTCTCTACGGTGTCCCTCGATCAAAAGTCCAAGATCGAATTTCGGGTAGATCTAAAGAACAACCTCGAAAAGTAGGTCCAGAGCCTATACTAGGTATTAAAAGTGAGCAAGAAGTCGTAGATTGGATTACAGAATTATCCAAATGTGGAATTCCTGTAAGAAGGCATCCGGAGATCAGCGTACGTGAACCTGAAAGTATTAATAAAGCCAGAGAGGCGGTCAGAGATAGCTTAATCAAAAAATGGTTTACAGATCTTGAATCTTTTTTGATTGAAAGAGGAGTTGTAGATATTATGAGCTTTCCTGACAGAATATTAAACGCTGATGAGAGTATAAATCCGCTTACGGTGTTTCTGTACATCAAACCACCAAAAGCAGTTGCAGATAATATGCCGGAAGGTCGGATAATCGGCAAAACTGAATCAGTAGATTTCACGAAATGCGTTAAGGATTTTCAAGAAAGAAGAAAGCAACGATCACTATCCTCCGGTGGGTTAACGGAACCAGACTATTCAAGTGTAACAAAAGtagtagttataataatagaCAATTTGTTAAAGAGAGGTATAGATCCAGATACGGTCATAAGAACAGAAAATAAAAGCATCAGAGAGGCCTGTCGTCTCTACGGTGTCCCTCGATCAAAAGTCCAAGATCGAATTTCGGGTAGATCTAAAGAACAACCTCGAAAAGTAGGTCCAGAGCCTATACTAGGTATTAAAAGTGAGCAAGAAGTCGTAGATTGGATTACAGAATTATCCAAATGTGGAATTCCTGTAAGAAGGCATCCGGAGATCAGCGTACGTGAACCTGAAAGTATTAATAAAGCCAGAGAGGCGGTCAGAGATAGCTTAATCAAAAAATGGTTTACAGATCTTGAATCTTTTTTGATTGAAAGAGGAGTTGTAGATATTATGAGCTTTCCTGACAGAATATTAAACGCTGATGAGAGTATAAATCCGCTTACGGTGTTTCTGTACATCAAACCACCAAAAGCAGTTGCAGATAATATGCCGGAAGGTCGGATAATCGGCAAAACTGAATCAGGCAAAGGATATATCCCATATGAGGTGTGGAATGGACAGAAGCCAGATCTTCACCACATAAGAGGTTCAGAAGGTGTAGTACTGCCGCGGGCGGTCTGGCAGACTGCCCGTTGGAAGTCCGCGCGATCTCATTTTGTCTGCACAGTCACCGACACGTCCGAGCGTGTATGCTTAGTCCAGGCGGCCTGTGGACAGACCTGGCAGTGA
- Protein Sequence
- MEEDKVDVASINRGSRKKQRKERSKRRVQDDKYKDKDPLCLNFFVPCVHKPSSAFKCIKLKEQDISRNRKLFYNNKEKQVMPLPKTPIQDSFYARQIRFYNFCVVNVDGRDPDFYCWTEDMAGRGSVEVIRTENKSIREACRLYGVPRSKVQDRISGRSKEQPRKVGPEPILGIKSEQEVVDWITELSKCGIPVRRHPEISVREPESINKAREAVRDSLIKKWFTDLESFLIERGVVDIMSFPDRILNADESINPLTVFLYIKPPKAVADNMPEGRIIGKTESVDFTKCVKDFQERRKQRSLSSGGLTEPDYSSVTKVVVIIIDNLLKRGIDPDTVIRTENKSIREACRLYGVPRSKVQDRISGRSKEQPRKVGPEPILGIKSEQEVVDWITELSKCGIPVRRHPEISVREPESINKAREAVRDSLIKKWFTDLESFLIERGVVDIMSFPDRILNADESINPLTVFLYIKPPKAVADNMPEGRIIGKTESGKGYIPYEVWNGQKPDLHHIRGSEGVVLPRAVWQTARWKSARSHFVCTVTDTSERVCLVQAACGQTWQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -