Beup012564.1
Basic Information
- Insect
- Boloria euphrosyne
- Gene Symbol
- -
- Assembly
- GCA_951802675.2
- Location
- OX637882.1:829140-830821[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.017 8.1 7.1 0.0 31 45 5 20 4 20 0.92 2 2 3e-18 1.4e-15 57.5 0.0 1 38 27 65 27 69 0.94
Sequence Information
- Coding Sequence
- atgcttATTACAGGCACACTTTACGGTAGGTGTAAGCGGGAAGGCATAGAGCTGTCTCGCTCGAACCCTACGCCGTGGTCTGAAGACGCCATGGAAGAGGCCCTAGAAGCTGTCAGAATCGGCCAGATGTCTATAAACCAGGCGGCCATACATTACAACCTGCCGTACTCATCTCTGTACGGTCGGTTTAAGAGGTGCAAGTTTCAGCCAGTACAAACATTTCAGAGCCAGCCGCCGGCCGCGGCGGCGCCGCACGCGGCGGACGCGTACGCGTACTACGCGCCCGCGCCGTACTGCGACGTGCCCAGCTGA
- Protein Sequence
- MLITGTLYGRCKREGIELSRSNPTPWSEDAMEEALEAVRIGQMSINQAAIHYNLPYSSLYGRFKRCKFQPVQTFQSQPPAAAAPHAADAYAYYAPAPYCDVPS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -