Bhyb000755.1
Basic Information
- Insect
- Bolitophila hybrida
- Gene Symbol
- stc
- Assembly
- GCA_027564075.1
- Location
- JANSTU010049335.1:6161-9338[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 1.9 1.9e+04 -4.0 1.6 15 19 342 346 341 346 0.81 2 13 0.091 9e+02 0.2 0.5 4 10 375 381 374 383 0.94 3 13 1.9e-06 0.019 15.1 16.6 3 19 388 404 386 404 0.94 4 13 7.8e-07 0.0077 16.4 7.5 4 18 443 457 440 458 0.92 5 13 1.7 1.7e+04 -3.9 0.4 5 10 487 492 487 494 0.85 6 13 2e-06 0.02 15.1 12.0 1 18 498 515 498 516 0.92 7 13 0.00027 2.7 8.3 12.6 4 18 564 578 557 579 0.87 8 13 0.0065 64 3.8 9.3 1 11 619 629 619 630 0.96 9 13 2 2e+04 -4.6 1.0 4 10 634 640 634 640 0.75 10 13 1.3e-09 1.3e-05 25.2 12.4 1 18 646 663 646 664 0.97 11 13 2 2e+04 -6.2 10.5 7 18 708 720 701 721 0.83 12 13 0.00011 1.1 9.4 11.3 1 16 757 772 757 783 0.85 13 13 6.3e-06 0.062 13.5 11.4 2 19 790 808 789 808 0.91
Sequence Information
- Coding Sequence
- AACCAGTCCAAGGAAGATACTTACGTCAACTTTAATCAATTTTTAAAGCAACAATGCTGCGTGCAACCACAGGATTCATCTGGTTTGGAGTCAACTTCTGTGAACTTTGATGCTGTTTTCAGAGAGGACTTAGTCAGAAACTCTAATTTATTGCCAACGGCAAATGAGTTTATACCTAGCAAACAATATTTAGAATCGTCTGGGGAAACGTCATCTCTATCCCATACAAATGTACCCAATCGTTTTTCAAGGATTAATATTGATGAGCGACCAACGCAGAGACCATTATATACAAATAAACAGGATATCGGAGCCAGTAGTCTCGAAGTTTCACAAGGAGCTTTAAAAAAGACACATAACAACAACAGAGAAAGTAAACGAAAACCTAAACATGCATTATCGTCTAATCAAACTAATGGATCTTGGAGAGACACCGAAAATGATAATAATCCAAGTTGGCATAGAAACGATAAACATCGGCCGAATGATTGGCGTTCCGATCAATATCTTAGGCGTAGCGGAACTGGTCGAACTGCTTCTCAATATGAGAACAATTATCGAAATTATCCAACTCAAAATCAATTCTTAGAAAATGATAATTCTTACGGAAAATACAACTCATCTAGAAATACTTCTCAACGTCATGAGAATGAAAATCATGATAAAACTAGTAATCAATTGAAACATCGATACAAAAATGACGACAATTCACAAAATCTAACTAAAAATAATTCAAGATGTACTTTTGAAAAGCGTCATGAAAATTATGTTCAGGAAAGACTTGACGGCAAACAAATTGGGATCAAGGCAAAAGCTTTGCAGGTTAAAGACGACGGTGGTCACTGTTCACAACGTGAAAAGTTAGTTCGTGAAATTGATGGCGGCAAATTGGAATGTTTGGTGTGCTGTGAGAATATTAAACCATTCCAGCAAACGTGGTCCTGCTCAAATTGTTTTCATATAATTCATTTAAATTGCGTCATAAAATGGGCAGCTAGCTCCAAATCTGATGATGGCTGGCGTTGCCCAGCCTGTCAAAATATAACAGTCAAGGTTCCCAGAGATTACTTTTGTTTTTGTGGAAAGCTTAAAAATCCAGTATACAATAGAAACGATGTTGCACATAGTTGTGGAGAGCTATGTACTAAAACAGATGGTTGCAATCATCCGTGTACACTACTCTGCCATCCTGGCCCATGTCCACCATGTCAAGCTACTGTTTCGCGAGAATGCGGCTGTGGCCGAAGTAATAAAACGATGCAATGTAATCAAAAGGAGAATCTTCAGTGCAATGAATGTTGTGATAAATTGCTTAGCTGTCTTGTGCATAAATGTATTAGCATATGTCACTTTGGACCATGCCAAGATTGTGATAAACAAATTGAGCACAAGTGTTATTGTGGTCGAAGTAAAAAGGATGTACAATGCACAGAATTCAATAATACTTATCAGAACTTTACATGTGGAAAGATTTGTAATAAATCATTGTCTTGTAAAAATCATAAATGCAAAAAAAATTGCCACAGTGGCGATTGTGGTGATTGCCTACTAGACCCAGAATTTTTAACATCCTGTCCCTGTGGTAAAACTCCAATCTTGGATGGTCAAAGAAAGTCCTGTGCAGATTTGGTTCCATTGTGTGGTGGTACCTGCGATAAGCCTCTCAAGTGTGGACCACCAAATAAACCACATTTATGCCAAAACAAGTGTCATACTGGTGCTTGCTCCCAATGTAATAAAGAAACAGCCGTTAAATGTCGTTGCGGTCATATGGACCAAATGGTAAAATGCCGTCAGTTAATGACCAGAGCAGACGATGCTCGCTGCAAGAAACGTTGCACAAAGAAGCGAAATTGTGGAAAGCACAAATGTAACCAGGAATGCTGTATTGATATTGATCACATTTGTCCAAGTTCTTGTAATTACAATCTTAATTGTGGAAAACATAAATGTGACCAGACATGTCACAAAGGAAGGTGTTTGCCATGTTACCGAAGTTCATTTGAGGAATTGTATTGTGAATGCGGTGCCAGTGTCATATACCCACCCGTTGCGTGTGGAACGAAGCGTCCTTCTTGTGATTTGCCATGCTCTCGACCACACCCATGTACGCATCCTGTACAACATATTTGTCATTCGTCTGCTACTTGTCCTCCATGTATGAATTTCACAACGAAATATTGTTTTGGAAAGCACGAGCAAAGAAAAACAATACCATGTAACCAGCAAGACTTTAGTTGCGGTATGCCTTGTAATAAAACACTAAAGTGCGAACAACATAATTGCATTAAGTCTTGTCATGCCGGAGATTGTGAATCTGATAATGAAGTATGTAAACAAAGTTGTCCAAAACCAAGGATAATGTGTGCTCATAATTGTAAAGCACCCTGCCACTTGGGTGAATGTCCAGATCTACCTTGTCGTGAGAACGTTGAAGTTTTATGCCAATGTGGCAATCGCAAAATGATTCGTACGTGTTTCGATTTTTCCAAGGAATTTCGCAGAATTGCGACTGCCAAGCTTGCATCTACAATGGAGGACATGCAACGTGGAAATTCAGTAGAACTACAGGATGTTTTGGGGCCAATTAAATTATCCAACAACAAAATGCTTGAATGCAATGAAGAATGTAGAGTTTTGGACCGTAATCGGAGATTGGCAATTGGGTTGCAATTAAGAAATCCAGACATGAGTGCAAAATTGCAGCCGAGATATTCAGAATTTATTAGGGGCTGGGCTAAGAAGGATCCTCAATTAGTTGGAAATATTCATGAGAAGCTGACCGAGTTAGTAAAATTGGCAAAAGAAAGTAAACAAAAATCTCGCAGTCATTCTTTTCCAACAATGAACCGCGAGAAAAGACAGTTGGTACATGAGATGTGTGCAATGTTTGGCGTTGAGTCAGTTGCTTATGATGCCGAACCAAATCGAAATGTTGTAGCCAATGCGACAAAAGAAACTACATGGATGCCAAGCATGAGTATATTCGAAGTATTGAAAAGAGAAAATGGTCAACGCCGCATACCAGTTCCAAGCAATAATGCATGGGGACTAAAACGATAA
- Protein Sequence
- NQSKEDTYVNFNQFLKQQCCVQPQDSSGLESTSVNFDAVFREDLVRNSNLLPTANEFIPSKQYLESSGETSSLSHTNVPNRFSRINIDERPTQRPLYTNKQDIGASSLEVSQGALKKTHNNNRESKRKPKHALSSNQTNGSWRDTENDNNPSWHRNDKHRPNDWRSDQYLRRSGTGRTASQYENNYRNYPTQNQFLENDNSYGKYNSSRNTSQRHENENHDKTSNQLKHRYKNDDNSQNLTKNNSRCTFEKRHENYVQERLDGKQIGIKAKALQVKDDGGHCSQREKLVREIDGGKLECLVCCENIKPFQQTWSCSNCFHIIHLNCVIKWAASSKSDDGWRCPACQNITVKVPRDYFCFCGKLKNPVYNRNDVAHSCGELCTKTDGCNHPCTLLCHPGPCPPCQATVSRECGCGRSNKTMQCNQKENLQCNECCDKLLSCLVHKCISICHFGPCQDCDKQIEHKCYCGRSKKDVQCTEFNNTYQNFTCGKICNKSLSCKNHKCKKNCHSGDCGDCLLDPEFLTSCPCGKTPILDGQRKSCADLVPLCGGTCDKPLKCGPPNKPHLCQNKCHTGACSQCNKETAVKCRCGHMDQMVKCRQLMTRADDARCKKRCTKKRNCGKHKCNQECCIDIDHICPSSCNYNLNCGKHKCDQTCHKGRCLPCYRSSFEELYCECGASVIYPPVACGTKRPSCDLPCSRPHPCTHPVQHICHSSATCPPCMNFTTKYCFGKHEQRKTIPCNQQDFSCGMPCNKTLKCEQHNCIKSCHAGDCESDNEVCKQSCPKPRIMCAHNCKAPCHLGECPDLPCRENVEVLCQCGNRKMIRTCFDFSKEFRRIATAKLASTMEDMQRGNSVELQDVLGPIKLSNNKMLECNEECRVLDRNRRLAIGLQLRNPDMSAKLQPRYSEFIRGWAKKDPQLVGNIHEKLTELVKLAKESKQKSRSHSFPTMNREKRQLVHEMCAMFGVESVAYDAEPNRNVVANATKETTWMPSMSIFEVLKRENGQRRIPVPSNNAWGLKR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -