Bhyb001446.1
Basic Information
- Insect
- Bolitophila hybrida
- Gene Symbol
- nfxl1
- Assembly
- GCA_027564075.1
- Location
- JANSTU010032085.1:1-2375[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.54 5.3e+03 -2.3 1.3 14 19 184 189 184 189 0.84 2 13 0.41 4e+03 -1.9 0.9 4 10 220 226 220 226 0.91 3 13 4e-08 0.00039 20.5 17.3 1 19 234 251 234 251 0.99 4 13 1.4 1.3e+04 -3.6 0.8 5 10 276 281 276 281 0.83 5 13 0.076 7.5e+02 0.4 11.0 1 18 287 305 287 306 0.86 6 13 0.73 7.2e+03 -2.7 1.5 5 10 330 335 330 335 0.92 7 13 1.3e-05 0.13 12.5 12.8 1 19 341 359 341 359 0.98 8 13 0.51 5.1e+03 -2.2 1.7 13 18 382 388 382 390 0.74 9 13 7.1e-08 0.0007 19.7 10.2 1 18 394 411 394 412 0.97 10 13 2 2e+04 -4.3 2.3 5 10 435 440 435 440 0.91 11 13 4e-05 0.4 10.9 13.9 1 18 446 463 446 464 0.94 12 13 1.5e-09 1.5e-05 25.1 13.3 1 19 473 491 473 491 0.97 13 13 0.51 5e+03 -2.2 1.9 5 10 519 524 519 524 0.91
Sequence Information
- Coding Sequence
- ATGTCCCAAAGAAACACAGAGAACCCTTGGGGTCAAAACTTGCCGGTTCCTCAGAAGTCATCTCAAAAACCGCCAAAGAAATCGAAGCAGGTGTCTAAAAATAATCCAACTCAAGTTTCATCAAGTGCAAATTCTTTGACAACCGCCAATAGTAAATTCGAAGAAGTTCAAAGAAAACACTTGGACAATGCTAAGAAACACATTTTGAACTATGAGTCCAGTTCGGACGAAGAGCTGGCCAGTGATTCAGTACTTGATTCCGTTTTTAAAGAATACTGTGGCGAGAAGAAAGAGCTTCAAAAAACTCAGCAGTTTCTCGAAAATGTATTTCAGTCGGGCTCAGCAACTTGTCTAATCTGCATTGCCTCTGTAAAACGTCAGGAGCCGATTTGGACTTGTGAGAGCTGTTATAGCTTTTTCCATTTGCCGTGTATCCAGCGTTGGGCAAATGACAGCACTTCACAGAAGAAACATCAGCAAGACAATGAAGTGGGCTATTACAATAATCTTGGTGAATATATTGCCAAAGAAAAGAAAGCCATCAATTGGAATTGTCCGAAATGCCGTACAGATTACTTGCGGGAAGAAATTCCCAGACAGTATACGTGTTTCTGCAAAAATGAGATAGATCCGCCAAATCATCCGTGGCTGGTGCCGCATTCTTGTGGAGAGCGTTGTGGAAAGGACTTGCAACCAAAGTGTGGCCACAAGTGTGTGTTATTGTGTCACCCCGGTCCTTGCCCACCATGTCCTCAAATGCTTACCACATCCTGTGCATGTGGTCAATCAGCTGTTCGGGCGATTCGTTGTTCACAGAAGAAATGGAACTGTATGCAAAAGTGCAAGCAAAAGTTGAATTGTGATATCCATTTATGCGGTCAACCATGTCATAGTCCGGACAAATGCCAGATATGTACAAAGAAGAGTCAGCAGCGCTGTGTGTGTGGAGACTCTTTACAGGAACGGAACTGTAGTGATCTAGTGTGGAAATGTGAAAAGGCCTGTGGGAAATTACTATCCTGTGGCTTGCACAAGTGTCGCATTAAATGTCACATTGGAGCCTGTGGAGGCTGTCCATTAGGCCAACCGCGAGCATGTCCATGTGGCAAAGAAAAATCGGTTGCACCTTGTTCAGAAGAAATTGGTCCTTGTGGAGATACATGCCAGAAACTTTTGACTTGTGGACTACATATTTGCGTAGAAAGATGTCACAAGGGCAACTGCAGTCCATGTTTAGAAATAACCAAAAAACCGTGTCGATGCGGATTGTACTCCAAAGAGCTTCCATGCGTAAAAAGCTTTACATGCGAAACCAAATGCAAACAAATGCGCGACTGTAACAAGCATACGTGCAATAGAAAGTGCTGTGACCAGCAATGTGCTCCTTGCGATAAGATTTGCGGTAAAACGCTTTCTTGTGGCAAGCACAAATGTACTTCGCTGTGTCATCAGGGTCAGTGTTACCCGTGTACACAAAAGGCTCCTGTAAAGTGCCGTTGTGCAAGTACTGTCATAAACGTACCATGCGGACGCGAGAAAAAGACCAAACCTCCGAAATGTACTCAACCTTGTCG
- Protein Sequence
- MSQRNTENPWGQNLPVPQKSSQKPPKKSKQVSKNNPTQVSSSANSLTTANSKFEEVQRKHLDNAKKHILNYESSSDEELASDSVLDSVFKEYCGEKKELQKTQQFLENVFQSGSATCLICIASVKRQEPIWTCESCYSFFHLPCIQRWANDSTSQKKHQQDNEVGYYNNLGEYIAKEKKAINWNCPKCRTDYLREEIPRQYTCFCKNEIDPPNHPWLVPHSCGERCGKDLQPKCGHKCVLLCHPGPCPPCPQMLTTSCACGQSAVRAIRCSQKKWNCMQKCKQKLNCDIHLCGQPCHSPDKCQICTKKSQQRCVCGDSLQERNCSDLVWKCEKACGKLLSCGLHKCRIKCHIGACGGCPLGQPRACPCGKEKSVAPCSEEIGPCGDTCQKLLTCGLHICVERCHKGNCSPCLEITKKPCRCGLYSKELPCVKSFTCETKCKQMRDCNKHTCNRKCCDQQCAPCDKICGKTLSCGKHKCTSLCHQGQCYPCTQKAPVKCRCASTVINVPCGREKKTKPPKCTQPC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -