Bhyb015501.1
Basic Information
- Insect
- Bolitophila hybrida
- Gene Symbol
- ZFY
- Assembly
- GCA_027564075.1
- Location
- JANSTU010034404.1:18598-22024[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.017 1 10.1 0.0 2 21 25 44 24 45 0.93 2 23 1.7 1e+02 3.8 0.1 1 21 81 101 81 102 0.90 3 23 0.0031 0.19 12.4 5.0 1 23 164 186 164 187 0.96 4 23 0.0036 0.22 12.2 3.0 1 21 250 270 250 274 0.91 5 23 2.7e-06 0.00016 22.0 2.2 1 21 313 333 313 337 0.91 6 23 0.0033 0.2 12.3 4.2 1 21 352 372 352 373 0.94 7 23 0.053 3.2 8.5 4.3 1 23 385 408 385 408 0.95 8 23 1.2 71 4.3 0.1 2 22 440 460 439 460 0.92 9 23 9.7 5.9e+02 1.4 11.8 2 23 470 491 469 492 0.94 10 23 0.68 41 5.0 0.2 1 23 501 523 501 523 0.92 11 23 0.0015 0.093 13.4 2.8 1 20 529 548 529 550 0.94 12 23 0.42 25 5.7 0.2 2 19 564 581 563 584 0.92 13 23 0.0063 0.38 11.4 1.3 1 17 621 637 621 642 0.87 14 23 0.11 6.9 7.5 0.8 2 21 651 670 650 671 0.92 15 23 0.29 18 6.2 1.6 1 16 707 722 707 728 0.84 16 23 7.4 4.5e+02 1.8 3.2 1 15 743 757 743 763 0.82 17 23 0.05 3 8.6 0.1 2 20 782 800 781 802 0.95 18 23 0.002 0.12 13.0 2.0 1 19 828 846 828 849 0.95 19 23 0.87 52 4.7 0.8 1 23 880 903 880 903 0.90 20 23 0.00023 0.014 16.0 0.6 1 23 922 944 922 944 0.97 21 23 0.0074 0.45 11.2 0.1 1 19 950 968 950 970 0.96 22 23 0.27 16 6.3 0.2 2 21 1017 1036 1016 1037 0.94 23 23 0.0037 0.22 12.2 2.0 2 23 1048 1070 1047 1070 0.94
Sequence Information
- Coding Sequence
- ATGGTGTACCATCCGCAGCTTTTGGACGTTAAGGTGGAGGAGGAGATTGATGTGGACGATGATGAAACTCAGTCATGTACCGAATGTGGTATGATGTTTCCGGATGGACCTTCGCTCAAAGATCATATTTTAAGTTCATCGTGTGGTACATACAATGAATTCGAAAATAATATGATTATCGAAGAGGATGCTTCAAGTTATTTGCAGGACAACTCTGAATATCAGGAACCAAGAATTACATACAATTGTATTGAATGCGGAGAACCATTTGACGAATTAGACACGTACCGAGAACATTTTCGAAATGTGTGTGGTGCTACTTATTCATTTGTTCATACTGAAAATGAAGCCGACCCGCTAGACACGTCAGACGATTTAATCGAACCGATGAGTACGCAGCCAGAGGTCGTCGATTTCGAACCATACAATGTTCAATCAGATCCGAACAGAATCTACACTTCGTTAGGCAACTCATCACAAGGCATAACATACTATTGTCAATTTTGTGACTATAGCTCAACCCGAAAATCAGATCAGAGTCGTCACATTAACCGCCATCATCCTGAGCGAATCCTACATCAATCAGAAGATTTTGGTGTCGTTGTAAATATACCAGATCCACTGAAGACTACTATGAAGACAACTTTGAAGACAACTTTGAAGACAACTATGAAGACAACTATGAATTCAACTCACAAAATTCCGAACAAGACCGTTAATGTGAGCAAATCACATACATCCCATGCATTTAAATGCACAAAATGTCAGAGATCCTACACACTTTATTATAATTTAGTACGTCATTTTCAACAGGCGAAACACAAAGGATCACTACCACCTCGGAGCTTTTTCACTAAGGTACGATCTGCACCGTATTCTTCAAATCCGTCCAATGCTATAAAAATGCTTATAAGATCAAATGATCCCGATCGTCCGTATAAGTGTCCAGACTGCCCAAAAACCTACATCAATAAAACGCATCTGAGACGACATTATCTAAATGCAAAGCACCAAGGTGAATTGCTAGATTATTATGAATCTCTTCCACGTTCTTTTAAATGCGATATATGCTTACGATCTTTTACCAGACTTCATCATTACAATAATCATAAATTGAAACCATGTGAACCAATACCAGAAAATCCTCCGTCTTTCAAATGTTTGGACTGCAATTGCGAGTGTTCAAGCCAATATGCTTTAGATCGTCACAATCGAGCGAATCATGCCATTGCCGATGCACTTACCGAAGAACAGATCAAGAGCACGGCTCTTTTAGAAGAAAGTATTGGTACAATACGTCAATCGGAAAAAGTAATGCAGTGTGCTTGGTGTTTGGACACATTTGATTTGAAATACGATCTAATTCGTCACACTCGTTCAAAAATATGTAACACTGAGAACGTTTTACAATGTAACAACTGTTGTCATCTCTTTTGTAAAGCGTCAACATTGCGTCGTCACCAGAAAAAACATCATGAAACCAGAAAACGTAATGGCATATATTCCTGTAGCTACTGTAAAATTTCACTGAAAAGCATACGCGGAATAGTTGAGCACGAACGTTTGCATAATATGGAAAAACCATACAAATGTTTTCACTGTTCGAAAAAATTCGTTCGACGCACTGGTCTGATGCAGCATAAAATTAAGTGCCAACCAGTTGTAATTGAAGAGACTTTTCCTGACAATCAGTGTCGTATATGCTTAAAAATGTTTGCAAACAGACATATTTTGATTCGGCACAATATACGCGTTCAGTGTGTACCTGCAGGTACAGATGAAGCTATACATCAAGAGCCAGACATTGAAATCATTGCAGCAGAAGATGTAATTGAGCACTTTGAAAATGCTGTTTCACAACATAAATGCGAAATTTGTACTAAAACCTTTAACACAAAGCGAATGTTGGCGTTCCATAAAAAGGTGTGCAACTTAGTCTTAGCCGAGAATCAATGTCCGAAATGTTACAAGTTATTTAAGAACAAGTACATTATGACGGCTCACCAACAAAAAGTTCAATGTACTAAATCTAAATTAGAACCGCAAATTAAAGAAGAGATCCCGATCAAGCAAGAATTTAAATTCAATCAACATTCAAATAAGCGTCAGAAAAAGATATATACTTGTGTGGGATGTAAGAAGATTTTCAAAAAAAAATGGAACTGTGATATACATCAGGGAAGATGTAAACTGCTTAAAAAATCGAAAAAGCTTACACAGGTAGGTTTTAAGTGCAAATACTGTGTAGAGCACTTCTACAATGAACAAGATCATAAGAATCATTCCACAAAATGCGAGAATAGTCCTGCACTAAAGCAGCTGCGTCAGTTAATTGAGAACAATCAATGTTCTGTTTGTCTGACAGCATTTGAAACGCGTAACGAACTGCAAGATCATCTAACTGGAAAACAATGTGTACAAGGTATTTTATCCAAAGATATGATTGTGGAAAATCGATATACAACGGATGCTTTAAAACGTTACAAATGCTCCAATTGTCCTCGGAAATTTAGTACGAAAACAGAACGTCGAAAGCATTTTATTCAATGTTGTCGAATTGTATCGAAATCAAATAATATAAAAACAGAATCAACTGATAATATCTATAAGAATGAAATCATGGACATGGAAAAACCATTTCATTGTACCGTTTGCACTGCACTGTTTGCAACCATGGGAGAATTATTACAACATAAGTACGAGCAACACATCAAAACGGTTGATACAAGTAACGTTATTCTAAAGAAATCTTGTGAGAAAGCATTTCAGTGCACGATGTGTGACCAAATGTTTGATTCGATCAGCGAACTGATGAGTCACGAAAAGCAACACACTAGCGGAAGACCCTACGAATGTACATTGTGTAAAGAACGTTTTGCGAGCGTTTCGAATTGGGCAAGACACGAGGACAATCGTGAATGTGAACGTAATATTGTTCCATCAACTGTTGTGGAATGCCCAAAGCCATGTGCGGTAGTTAAACCTACTGCTAGGGTGATCGCACCAACAGAATCTTATGAGGAGTCTACATCGTCACAGTTTCCTTTACAGTGTTCAACATGTTTGCGATCGCAAAAGAGTAAAGCTGCATTACAGAAACACATACAGGAATCAAACTGTACAGAACCGGATGAGTTCGTGACCTGTAATGTTTGCTTGAAAAAATTGCGAAAATCTTCGCATCTGATGAAACACTTGTTATACGTACACAATATTAATTCAAAGTAA
- Protein Sequence
- MVYHPQLLDVKVEEEIDVDDDETQSCTECGMMFPDGPSLKDHILSSSCGTYNEFENNMIIEEDASSYLQDNSEYQEPRITYNCIECGEPFDELDTYREHFRNVCGATYSFVHTENEADPLDTSDDLIEPMSTQPEVVDFEPYNVQSDPNRIYTSLGNSSQGITYYCQFCDYSSTRKSDQSRHINRHHPERILHQSEDFGVVVNIPDPLKTTMKTTLKTTLKTTMKTTMNSTHKIPNKTVNVSKSHTSHAFKCTKCQRSYTLYYNLVRHFQQAKHKGSLPPRSFFTKVRSAPYSSNPSNAIKMLIRSNDPDRPYKCPDCPKTYINKTHLRRHYLNAKHQGELLDYYESLPRSFKCDICLRSFTRLHHYNNHKLKPCEPIPENPPSFKCLDCNCECSSQYALDRHNRANHAIADALTEEQIKSTALLEESIGTIRQSEKVMQCAWCLDTFDLKYDLIRHTRSKICNTENVLQCNNCCHLFCKASTLRRHQKKHHETRKRNGIYSCSYCKISLKSIRGIVEHERLHNMEKPYKCFHCSKKFVRRTGLMQHKIKCQPVVIEETFPDNQCRICLKMFANRHILIRHNIRVQCVPAGTDEAIHQEPDIEIIAAEDVIEHFENAVSQHKCEICTKTFNTKRMLAFHKKVCNLVLAENQCPKCYKLFKNKYIMTAHQQKVQCTKSKLEPQIKEEIPIKQEFKFNQHSNKRQKKIYTCVGCKKIFKKKWNCDIHQGRCKLLKKSKKLTQVGFKCKYCVEHFYNEQDHKNHSTKCENSPALKQLRQLIENNQCSVCLTAFETRNELQDHLTGKQCVQGILSKDMIVENRYTTDALKRYKCSNCPRKFSTKTERRKHFIQCCRIVSKSNNIKTESTDNIYKNEIMDMEKPFHCTVCTALFATMGELLQHKYEQHIKTVDTSNVILKKSCEKAFQCTMCDQMFDSISELMSHEKQHTSGRPYECTLCKERFASVSNWARHEDNRECERNIVPSTVVECPKPCAVVKPTARVIAPTESYEESTSSQFPLQCSTCLRSQKSKAALQKHIQESNCTEPDEFVTCNVCLKKLRKSSHLMKHLLYVHNINSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -