Bhyb002091.1
Basic Information
- Insect
- Bolitophila hybrida
- Gene Symbol
- hang
- Assembly
- GCA_027564075.1
- Location
- JANSTU010013699.1:1337-9540[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.00083 0.05 14.2 0.6 3 23 267 288 266 288 0.96 2 23 5 3.1e+02 2.3 4.0 3 22 362 381 361 381 0.92 3 23 0.19 11 6.8 1.1 3 21 391 409 390 410 0.94 4 23 0.012 0.72 10.6 0.6 3 23 452 473 450 473 0.93 5 23 0.0014 0.086 13.5 0.9 3 23 588 609 586 609 0.95 6 23 8.5e-05 0.0052 17.3 0.8 1 23 617 640 617 640 0.97 7 23 6.4 3.9e+02 2.0 0.1 2 23 653 675 652 675 0.92 8 23 0.092 5.6 7.8 1.5 1 23 678 700 678 700 0.97 9 23 0.0028 0.17 12.6 1.9 1 23 706 729 706 730 0.95 10 23 0.12 7 7.5 1.2 2 23 821 842 821 842 0.94 11 23 0.099 6 7.7 4.0 2 23 861 883 860 883 0.95 12 23 0.0061 0.37 11.5 0.3 2 23 892 914 891 914 0.95 13 23 5.3e-05 0.0032 18.0 0.6 1 23 951 974 951 974 0.97 14 23 0.00022 0.013 16.0 0.8 2 23 1008 1029 1007 1029 0.97 15 23 0.0062 0.38 11.5 2.0 2 23 1038 1060 1038 1060 0.96 16 23 0.00019 0.011 16.2 2.0 3 23 1069 1089 1068 1089 0.98 17 23 0.0076 0.46 11.2 2.8 2 23 1125 1146 1124 1146 0.96 18 23 0.016 0.95 10.2 0.0 1 23 1190 1212 1190 1212 0.93 19 23 0.0024 0.14 12.8 0.1 3 23 1249 1270 1248 1270 0.91 20 23 0.026 1.6 9.5 0.6 2 23 1295 1316 1294 1316 0.95 21 23 6.8e-06 0.00041 20.8 0.1 3 23 1330 1350 1330 1350 0.99 22 23 0.00028 0.017 15.7 1.0 1 23 1498 1520 1498 1520 0.97 23 23 0.069 4.2 8.2 0.9 2 23 1568 1590 1567 1590 0.95
Sequence Information
- Coding Sequence
- ATGACGACGGAAGACCCGCTTCGCCGGTCGCTTATTCAACGGGGCGGATGTCGACTGTGCATGGCCCCAGACTCAGAGTGTGTTCCCATTTTTGCTACTGCCGCTGCTGACAAAGAGCCACTCTCGTCGAAAATCCAGGCCTGCGTTCAAATTAAGATTCAACAAGCCGACCGACTTTCGGGACGAGTATGCCACGCTTGCATCAGCTACCTGAACTCTTGGCAGAGTTTCAAAAATCGCTGCTATGCATCTCAAAAGAAGCAACGGGGTCTATTGGAGTTATATATGACCAAAGAGCGAGCAAAACAAAAGTTGGGAGGTGCTGCTCAACAGCAAAACTCCTCCACAGAGTCGATTAGTTTGCAAAGACAGCGACAGCTGGATCACCAAAGAGCACAATTACAACAACAGCGAATACTGAAGCAGGCATTAAGTCAGCCGCCAAACAATAAAATAACTGATGTAGATGTCAGTTTCATAAAAGCGGAACCAGTTGATGCACCGCatgaggatggtgatttcgatgaaggtcataatggtgaagatgacgtcgatgaaatggatccaacacagtttcttgcccgagacgatgaagacgatgatgatggtgGCATTAGTGATGCGGTTCCCTTCGAAGATGGACCACAGATTCTGACATCACTCGGTCTAACACATATAAATCATAACACCGATATGGATATCGATCCGTCAATGGCCGAAACCGATGATTCAATGATTTATGCAGCCATGCTTGAATCATCGACCCCACGTCGCCTGGGACCACCACAGCAACCAGCCTGTACTATTTGCAACATGAAATTCTCAAATCGAGCAAATGCTCGTCGTCATGAACGTAATATACATGGCAAGAAAACTAGCTCCATGATGCCTATGCAAAACAATCATCATCAAATATCCATAAATGCACCATTGCGACCACGCCTGCAAGCCATTCTTGCCAAACGTAGTACTGTTCTATTTGACTATGATCGACCTGAATTATACCGTGAATTGCTCACCGACTCCAAATTGCATTTCATCAAACGTCACATTGATTTTCTAGAACAATACCAGAATATGCACTGCACTTGTTGTGACAAAGATTTTCCCACGTATAAATTCTTTATGTTGCACATGCGCAAAAAATATTCGACACTCTCACGAAATCTTTGCTTCAAGTGTCTCAAGCAATTCGAAACAAAATCTCAGTTTATTGGTCATTTGAAAAAGAAGAACTGCATTAATTTGTATAAAGTTTATTGTGCTGATGATACAATCTCTAAGGAACCATTGCCACCGACACCGTCTAGTCGTGTTGGTACCAAAGAGATTATTGCCAATAAAGTGTATGGTTGCAAGCTATGCGAGAAAACATTCCGATTGAAGGTCGACTATCGTAATCATGTATTTGTTGAGCACGCCGAAGAGCTGAAGAAAGAGACAATGGGTCCATCATGTGGTTTTTGTAAGGCTGAATTTGAAGATCCGGCCATACGTAAGCGTCACTTTAACAATATGGAGTGTATTGTATTCCTGATATGCGGAACGTGTGAGGATAAATTTGATAATTTGGCACAATACATTGAACATGTGTACGCTGCTCATTTGCAGCCACCAGCCTCAGCAGCTTCAGCTGCAGCAACGAATGGGGCGGCTCCAGTAACAAGTACACTCAGTGATGATAGTGCCATGTACAGTTCAGGCGGAGAGTATGATCCAATGTCACCGGCACAACAGGCACGCATGCGTAATCCACAAAATTGTCGAGTATGTGGAAAACAGTATAATAACTATTACAATGTTTTGCGACACATGGAATCGAAACATCCAGATCAGTTGCCAAGTACATATCGTTGTGAAAAATGCTCTACCGGTTATCCACGTCAGTCAGAGCTACGTGATCATATGTACAAAGAACACGGAATCACATTACCTAAGATCAAGCGAGAATTCTTGAATTGTCGTATATGTGGATCAATTTCCGAGAATCGTGAGATGTGGATAGAACATCAGGCCTCAACGCATTCCAAATTCTATTGTAATCTCTGTGAACATGAAACTGAAAACAAAGAAGAATTCGAGACACATTTAAATGACCATCAGAATACAAAACAGTTTACCTGTACAATATGTCAGCACTCGTTTAACTCTGAGCGTGGTCTGGTTACGCATCTTGCGGTTATGCATCATATGAAAAAAGATGAAATGCCAACCCAAGCTGATGATGGTGAACAAGAAGAAAGTTTTGAGTTTCCAACGGCAATGCTTGAACCAAGTGTTGGTGTTCATGTCAATGGTGACACAGAGGACGAGGCAAGTCATACACTGAATGGTGACACCGAATATTCTGGTGATGAAACGATGGCAATCGATGCAGACAACGATGAAACATTTGAAGAACAGGCAACCAAGAAACGAAAACTTGATCTATCCGAAAGTATTGCCGAAAGCAAACGTAGACAGTGTATGATATGCCATGATTGGTTTTCAAATACAGCCGCACTTTCAAATCATATGCGTACCCATTCGACGCCATTGGTTGGTGTTCATGGACAAAATAAGCACGCAACCAGTCGTATGCGTTGTCGTATTTGTCAGAAACGTATTCACACAAAACAAAGCTACAAACGACACATGCTTAATGAACATCAGGTCAAGGACTGTGTTTTCATTCGTTGTAAACTTTGTCCGGCTGAATTTAGCAATGATAAGGGTTTGAAGGTACACATGTTCCGAACGCACAATATAACCGTACAACAAATGCAACAGGACGAACGATTGCGTCCGATTCCAAAGCAGGAGTCAACTACACCGACACCGGTTCTGGCAAAGATTCAGCCGAAGCTTATGTATGAATGCGATATTTGTCATACTGTGTACAGGAATCTGGAACAACTACGAGCACATAAGAACGTTGTTCATGGTCCCGAGAGTAACGCTACTACTCCAATGGACGCATCCTATGCTGAAAACACCTTTGAAGATGTACCCGAACCAAAGACCTCCATTGAATCCTGGTGGCAGTGTCGCTATTGTGACGAAAACTTTAATGCCAGCAAGAAATTGACAATTCACATGAACACTCACCAGGAGCACGATAATACAAATAATACATGCAAGGACTGTGGTAATGTGTACGCATCACGTAAGTCACTGTGGGTGCACAGACACAAAAAGCATCCACGTCATCCGAATCCATCGGCATGTGAACTCTGTGACAAGATATTCTTTGACAAAACCGAGCTGTTCCATCATTTGAAGACTCACTCGAATTCCGATGTTTTCTCGCATCTACAAGATATGCAAATGCAACTAGAAGAAGAACACGGAATGAAACAACAACAGAATAACTATCCGGATGATGATGATTTATCGTGTCATCTATGCGGTCAGAAGTTCTATGACAAACGTGTAATGAGCAAGCATTTAAGATTGCATGAGACTGGTCAGTTGGCTAGTACACCATTGGAAGCAATGCTGGCCGATACACCTATTAAAATGGAGGATACCGGTGCTAGTGATAGTTATAGTTATCCATCGTATCAAGGTCAAATGGTTGATGGTGAGTATGCCTGTGACATGTGTCCGAAAACGTTCCCGTTGATAAATGCCCTGAAAGTACATCGTGGCTGGCACTTTAGAAGTCCGGACGGACGTCAAGTAACCGATCCAGATAATATGTGGCAACCAGACTCAATTCCAGCTAGTAAAGGTCGACGTTCGAGATCATCAAATCCACCTATATGTCCATACTGTAATTCGACATTTGCTAGTGGTAATAATTTGCGCCGGCACATTGTGGAGGTACACAAGCGAAACGAAGCAAAGATGATGCGTGAAAATGGTACAGTCAGCGAATCGGTGTACGTGGAAAAAGAACTAGAGTGTCATACGTGCTCGATTACATTTAGTAATAGACCAGAGTGGGTGGACCACAAGATATCACATGCACGTACCATGAAACCATCAACCACATTCGAGTGGGGCTGTGAGATCTGTGGTAAAGTGTTTACGCGCAAGGAACGACTGTTGGCACATATGATTGTGCATTTGAGTGGTAAGGACGAGGATAGTCAGCAGAACAGTGAGATTGGTGGTGAGAGTAACTCGCGTAGTTCGATTTCATCACAATCACAATCGCAACAGTCACAAGAAtcgacgacggcacatgttcagctaaaaaagcaattacagcaacagattaaaatgcaacaaccacgtcataaggtcggcgatgaggaagatgatgaagaggttgacgatgaagatgttgttgatgaggttgaagaggatattgatgaagaagaacaaccagaagatgatgatgatgttgaagaaatagccgatgacgatgatgaagtcgacgatgatgacgaagatgtgatcgaagacgatgatgctgttgaagacgaagatgtaatcgaagaggatgaagttgttgaggaagaggtacttgaacatgaaCCGGATACTGTTAAACCCGAAGCTGCCTATTCCTGTGATCTGTGTCAGGTATTCTTCCGTACCGCAAAGGAACTACGACGACATGTGACTAGTCACATTTTAACTGAAACCGGTTCTGGCGGAGATGGATTTCCGGCAGTAAACGATGGATTCAAGTGTAGGCTGTGTGGATCAAGTAGTGCCTCACATCTCGGTATGATTCAATGTATGGAAAAGCACAAAGTGCCAACCAGCCTCAGGTGTGCCGAATGTCAAATGTACTTTGCTGATGCTAAGCAGGTGATGAGACACGAACGACTATGTCATCCGAATGTGGACGAAGACGACGAATAA
- Protein Sequence
- MTTEDPLRRSLIQRGGCRLCMAPDSECVPIFATAAADKEPLSSKIQACVQIKIQQADRLSGRVCHACISYLNSWQSFKNRCYASQKKQRGLLELYMTKERAKQKLGGAAQQQNSSTESISLQRQRQLDHQRAQLQQQRILKQALSQPPNNKITDVDVSFIKAEPVDAPHEDGDFDEGHNGEDDVDEMDPTQFLARDDEDDDDGGISDAVPFEDGPQILTSLGLTHINHNTDMDIDPSMAETDDSMIYAAMLESSTPRRLGPPQQPACTICNMKFSNRANARRHERNIHGKKTSSMMPMQNNHHQISINAPLRPRLQAILAKRSTVLFDYDRPELYRELLTDSKLHFIKRHIDFLEQYQNMHCTCCDKDFPTYKFFMLHMRKKYSTLSRNLCFKCLKQFETKSQFIGHLKKKNCINLYKVYCADDTISKEPLPPTPSSRVGTKEIIANKVYGCKLCEKTFRLKVDYRNHVFVEHAEELKKETMGPSCGFCKAEFEDPAIRKRHFNNMECIVFLICGTCEDKFDNLAQYIEHVYAAHLQPPASAASAAATNGAAPVTSTLSDDSAMYSSGGEYDPMSPAQQARMRNPQNCRVCGKQYNNYYNVLRHMESKHPDQLPSTYRCEKCSTGYPRQSELRDHMYKEHGITLPKIKREFLNCRICGSISENREMWIEHQASTHSKFYCNLCEHETENKEEFETHLNDHQNTKQFTCTICQHSFNSERGLVTHLAVMHHMKKDEMPTQADDGEQEESFEFPTAMLEPSVGVHVNGDTEDEASHTLNGDTEYSGDETMAIDADNDETFEEQATKKRKLDLSESIAESKRRQCMICHDWFSNTAALSNHMRTHSTPLVGVHGQNKHATSRMRCRICQKRIHTKQSYKRHMLNEHQVKDCVFIRCKLCPAEFSNDKGLKVHMFRTHNITVQQMQQDERLRPIPKQESTTPTPVLAKIQPKLMYECDICHTVYRNLEQLRAHKNVVHGPESNATTPMDASYAENTFEDVPEPKTSIESWWQCRYCDENFNASKKLTIHMNTHQEHDNTNNTCKDCGNVYASRKSLWVHRHKKHPRHPNPSACELCDKIFFDKTELFHHLKTHSNSDVFSHLQDMQMQLEEEHGMKQQQNNYPDDDDLSCHLCGQKFYDKRVMSKHLRLHETGQLASTPLEAMLADTPIKMEDTGASDSYSYPSYQGQMVDGEYACDMCPKTFPLINALKVHRGWHFRSPDGRQVTDPDNMWQPDSIPASKGRRSRSSNPPICPYCNSTFASGNNLRRHIVEVHKRNEAKMMRENGTVSESVYVEKELECHTCSITFSNRPEWVDHKISHARTMKPSTTFEWGCEICGKVFTRKERLLAHMIVHLSGKDEDSQQNSEIGGESNSRSSISSQSQSQQSQESTTAHVQLKKQLQQQIKMQQPRHKVGDEEDDEEVDDEDVVDEVEEDIDEEEQPEDDDDVEEIADDDDEVDDDDEDVIEDDDAVEDEDVIEEDEVVEEEVLEHEPDTVKPEAAYSCDLCQVFFRTAKELRRHVTSHILTETGSGGDGFPAVNDGFKCRLCGSSSASHLGMIQCMEKHKVPTSLRCAECQMYFADAKQVMRHERLCHPNVDEDDE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -