Basic Information

Gene Symbol
SMARCC2
Assembly
GCA_027564075.1
Location
JANSTU010024805.1:7372-11337[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.3e-13 1.4e-10 41.3 0.2 3 44 650 691 648 693 0.95

Sequence Information

Coding Sequence
ATGGCTTTGCTGGGCCCCAAAAAGGATGGTGGACCAAACATAGAGTTTTTCCAATCGGCTGAGTCCATGCAAGGATTCGAGACGGTGCGACAGTGGCTTCAAAAAAACTGCAAAAAGTACGTTCAAACGGATCCACCGACAAAAGAATCGCTTTGTCAGCTTATCATTCAGTTCATTCAGTACCAAGAAACTAAACTAGGTAAAAAGGAAGATGAACCCGTATTGACCAGACTACCGATGCGATGCTTTCTAGACTTTAAGAATGGCGGTAGCCTTTGTCATATTCTGGCCAGCATGTATCGGTATAAGTTCGATCAGAAATGGAGAAAATTCGATTTCTCACTTGGCAAGAATGCATCTCGAAAGGATCCCAATATACAGATGCTTATGGAAATCGAAACGGCTCTCATTGAAGCGGAATGCTTTCGATTGCCGGTAGTATTCGTGCGTCCAGAAGTAGACAAAACATTGGCATTGCAGATTAAGTCCATCATTGAAAATCACCAGGGCGAGGTCACTGAGGACGAGGAAGAGGCTTCACACATTGTATGTCGCATTGTTGAGCCATTCCAAGAAGACTACGCACGTCCAACTTTGCGCAAAGGCAATCATGTGATGATGCATTGGTACTATTTCCCGGAGTCGTACGATTCTTGGGTGCCCAATACATTTGATTTACCGGATAACATTCCCGAGAATCCAGGTTCACCAGAAGATCGTTGGCGTGTTTCAGCCTCGTGGGTGCTGGATCTTGACCAGTACAATGAATGGATGGCAGAAGAGGACTACGAAGTTGATGACAAAGGCAACAAAAAAGTACATAAGCTTCGAATGTCAGTAGAAGAGATTCAACTTGCCAGCGGTATGGATGAGAAACGTTCAAAAGGGCTTGCAGGTAGTAGTGGAAAGGCGAAAAGGCGCCGTTCGCCATCTCCACCACCTACAAAAGGATCCAACAAACGAAAGAGTGGCAGGTCACCGGCAGTGTTCCAGCGGAACAAGCAACGCAGCAGCGACGGAATACTGGACGACGAGGAAGATTTGACTAGAGACATGGATGATCCTTTACCCGAACCAAATATAAGTGAAGTACCAAAATCCATTATAGCTGGTCTGTCTGCGTCCAGCCCAGCACCATCAATATTGGGAATCAAACAACGCGGTGACTCCGACATGTTGCCAATAAAAGGTGGAATTGTTGCTGATCTAGATGAAGATATGGAGCGCACTGGTGGTGAAGACTCTCAAACAGGAAAAGGTAGTGAGAACAGTAACACACAAGATTTTCCACCAAACAAAGACGATTTAGAGGATAATGTAACAGAGCAAACGCACCACATCATTGTCCCATCTTATTCGGCATGGTTTGATTATAACTCTATTCACGTAATTGAGAAGCGTGCCATGCCTGAATTTTTTAATGGCAAAAACAAATCTAAAACACCGGAAATCTACATGGCCTACCGTAATTTCATGATAGACACGTACCGATTGAATCCGACTGAATATCTGACCAGTACGGCATGTCGTCGTAACTTGGCCGGAGACGTGTGCGCAATAATGCGTGTTCACGCATTTCTGGAACAATGGGGTTTGATTAACTATCAAATTGATGCTGAGTCTCGTCCTACCCCAATGGGACCTCCACCAACATCGCACTTTCACATTCTTAGTGACACACCGTCCGGTTTGCAACCGGTTAATGCGCCAAAAACGACACAGCCATCTGCAGCCAAGGCATTGTTCGATCTTGACAAGAAAGGTAAAGATAAGGATATTGACGCTTCCTCACCAGCAGCAGCTGCTGCGACCATTGCTGCTATTACTCCTAATGCACCCGGTAAAGAGACCAATTTCGACGCGAATGCTCAATTCGGCCTCAAATTGGATCAGTACTCTAAAAAACCAGCTGCTTTACGTAATCGTACAGCGGCTAGTATGACACGCGAATGGTCCGAACAGGAGACGTTATTGCTTCTTGAAGGACTTGAAATTTATCGTGACGATTGGAACAAGGTTTGCGAGCATGTCGGTACACGTACTCAGGATGAATGTATTCTACACTTTCTGCGGTTGCCTATCGAGGATCCGTACTTGGAAGATGACAGTGGCTATCTGGGTCCTCTTGCTTATCAACCAGTTCCATTCAGTAAATCAGGAAATCCGATTATGTCAACTGTCGCATTTCTGGCTTCAATCGTTGATCCACGCATTGCTGCTTCCGCTGCAAAGGCAGCCATGGAGGAGTTTGCAACAATTCGAGAGGAAGTCCCACCAGGTATCTATTATGCACACTACAAAAATGTCGAAAAGACTGCAGTAGAAGGTAAATTCGATCCAAATGCTGGTCTGGCGATTAGTGGTATTGCTGGCACTGGTACAGATAAGGAAGATGACGACTCCAAATCACCAGCAGATGAAGAGATGAAAGATCTTACGAAAAAGGACGGCGAAAAACTTGACGACAAAGAAAAGTCTGATAGTAAAGATAATGACGTTGAAACGGTTGAAGATACCATTAAGCCAAAAGATTCATCTTCTACTATTATGGCAGCCGTAGACAAAGAGTCGGTCGTAATTAAGCTGGAGAACGATTCTGGTATCGAAGGTTCTCTGGTAAAGGCAACCACAACAATCGAGGGAGGCGCAGATGCTACTACATTGCCCACAACAAACGGCAGTGACAAGGATCTGGAAGAGAGCAAAAAATTATTTAATGAATCGGACTTGCAGCGAGCAGCTGCAGCGGCTCTAGCTTCCGCAGCAGTTAAAGCAAAACACATGGCTGCACTCGAGGAACGCAAAATTAAGAGTCTTGTTGCGTTGTTGGTCGAAACACAGATGAAGAAATTGGAGATTAAATTGAGACATTTTGAAGAACTTGAAACTACAATGGAACGCGAACGCGAAGGATTAGAATATCAGCGTCAGCAGTTGATCACCGAACGTCAACAGTTTCATTTGGAACAGTTAAAAGCCGCCGAATTCCGGGCTAGACAACAGGCTCACCATCGCTTGCAGCAGGAACAACAGGGACAATGGCCTGCTGGATCTCAACCGCCACCAGCCGGTGCTGTAATACCATCTACTACCGCTGTTGCAACCCCATCAGTTCTGAGTGCTCCAGTCGCCAGTGAAGCGTCATTGACTGCTCCGTCACCGCCCAGTGTGACAGCCACACCATCTGGTCCAACAAACCCTGTTGCATCACCATTACCCACAGTTTTGCCGGTTCCATAA
Protein Sequence
MALLGPKKDGGPNIEFFQSAESMQGFETVRQWLQKNCKKYVQTDPPTKESLCQLIIQFIQYQETKLGKKEDEPVLTRLPMRCFLDFKNGGSLCHILASMYRYKFDQKWRKFDFSLGKNASRKDPNIQMLMEIETALIEAECFRLPVVFVRPEVDKTLALQIKSIIENHQGEVTEDEEEASHIVCRIVEPFQEDYARPTLRKGNHVMMHWYYFPESYDSWVPNTFDLPDNIPENPGSPEDRWRVSASWVLDLDQYNEWMAEEDYEVDDKGNKKVHKLRMSVEEIQLASGMDEKRSKGLAGSSGKAKRRRSPSPPPTKGSNKRKSGRSPAVFQRNKQRSSDGILDDEEDLTRDMDDPLPEPNISEVPKSIIAGLSASSPAPSILGIKQRGDSDMLPIKGGIVADLDEDMERTGGEDSQTGKGSENSNTQDFPPNKDDLEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNGKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDAESRPTPMGPPPTSHFHILSDTPSGLQPVNAPKTTQPSAAKALFDLDKKGKDKDIDASSPAAAAATIAAITPNAPGKETNFDANAQFGLKLDQYSKKPAALRNRTAASMTREWSEQETLLLLEGLEIYRDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDDSGYLGPLAYQPVPFSKSGNPIMSTVAFLASIVDPRIAASAAKAAMEEFATIREEVPPGIYYAHYKNVEKTAVEGKFDPNAGLAISGIAGTGTDKEDDDSKSPADEEMKDLTKKDGEKLDDKEKSDSKDNDVETVEDTIKPKDSSSTIMAAVDKESVVIKLENDSGIEGSLVKATTTIEGGADATTLPTTNGSDKDLEESKKLFNESDLQRAAAAALASAAVKAKHMAALEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQQEQQGQWPAGSQPPPAGAVIPSTTAVATPSVLSAPVASEASLTAPSPPSVTATPSGPTNPVASPLPTVLPVP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00210744;
90% Identity
iTF_00210744;
80% Identity
-