Basic Information

Gene Symbol
Snapc4
Assembly
GCA_027564075.1
Location
JANSTU010016709.1:5338-7768[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 8.4 9.2e+03 -3.0 0.0 2 18 150 166 149 166 0.83
2 6 1.4 1.6e+03 -0.6 0.1 23 46 227 252 226 252 0.73
3 6 1.6e-11 1.7e-08 34.5 0.1 1 38 258 296 258 301 0.94
4 6 2.9e-07 0.00032 20.9 0.0 3 43 314 358 312 361 0.95
5 6 2e-10 2.2e-07 31.0 0.0 1 45 367 412 367 413 0.95
6 6 9.6e-09 1e-05 25.6 0.0 4 42 422 461 421 464 0.89

Sequence Information

Coding Sequence
ATGTCGCATGTAAATTCCGACGATGAGGATATCCGATCCGAGTATACAGAACAATCAGCCAACGAAAATGAGGACGAAGATGATGACCAGGTCGATTATATGGCCGAAATCCGTTATAATATTATGGCCCACGAAGAGATCAACACCACAAATGCACTGTACCTTAACAAATGTATGCAGAAAAGTCTCAAGGAATTGCGAACACAACTCCAGGACATGCTAAAAAAGTGTAACGAAAAGTATCAGGCAAACGAGATGTATTTAACAAGAGCGGCCAACACTAGCAGTTCTTTGACCAACAGCATTGGACGACCTTACTCAGCCTACTACTGTGGTGCTCCATACTTTAAGAATCACTTACTTTTCTCACCACCACCGAACGAGGACTACCTGTACCGGAAAAACTATTTGAAAGAGTATTTCCCAATGGATCGAGTTGATAATAAAGTAAACTGGGTGTCAAAGGATAAGATATTTCTGATAAAAGCGGTCAAGCAGCAACTAATCCAATTCCTGGAATCACAACAGCGTGACCGTATAAGACAACTTAGAAACAATGCAAAAACTAGTACCCAGTCTGAACATGAGTCCACTGAGATAATTGTAGATTTTAATATAAAAACACTGGCTCAACTCTATCCAATGATTGAGACTGCCGATCGTGAATTTATCATAGATTGGTATACAATTTCAATGCAAGATCTAAATGGACGTCATTTACCGAATGCATGTATTGCAATGTGGAAGAATTACCTGATGCCGACGCTTAATCGTGATCCATGGACACCTGAAGAAACAGAAAAACTTATGGACGTTGCCGAAGCTATGAATAATCAAAATTGGAAAGTAATTGCTGAACAAATGCAACGACGCTCAGCGTATCAGTGTCTGGTTCAATTCAAGGCTATGGAAGCGGAACGAAATGTATTGCGAAACGTTAAATGGACACCGAGCGAAGATGCACTGTTGCTGGCCAGCATTGAAGATCTCCGCGTTGGGAATATGATACCGTGGAGTAATGTTGTGGAACGAATGCCGGGTCGTAAGAAAATTCAAGTGTATACTCGTTACATGTTTACACTGAAGCCGGGCATTTGTAAGGAAAAGTTTACTGTTGCCGAGGATTGTATTTTAATGGCTGCAATAAAAGAGTACGGTACAAATTTTCATATGTTTCCGGCCAAACTGCTGCCCGGACGAACAGCTGTTCAGATACGCAATCGCTACAACAATAAACTAAAGTATGCGGCTAACTCACGATTCTGGACACGTGATGATGACGAACGTATGATGAGTTTAGTTGAAAAATACGGACCCACCAATTGGGTACAGATCGCAAGTGAAATGGAAATTTTCACGCGTACTCGATGTCGTTCGCGCTACGTTGTTATCACAAAATTTCTAGAGAAAAATCCTGATAAAACATTACGAGATGTCCCACTTAGACATAAACCATCCACCTTAAATGTAACAGAAGAAAATTGGATGACGACATTAATCAAGGAACAATGTGATGCAAATAAACCGAAGGATATACAGGTCAAGGAGAAACGGGTCAAAGAAATACCTGCTTCGAGCAAGTTATCTGCAAATACAGTGGAAATGCCAGCCCAATCGTCTAGATACCGAACAATGAATCAACGAATGAACAACAATATGTTTGAGTACCTAAAGTACTCTTATGGATTTAAAATGAAACCTATGCTTCCACCGGAGTTATTGGCAACGGACAGTAGTCGTGTTGTATGTCAACTTCTTTACAATGCTATATGTCCAAATGATTATCAGCTCTTGTTCGGCAAAGACGGTATACAGATCGATTTAGAGTATTTTGGTTTCTCAGATCGAGATCAGTATAACTATGTATTACCGCCGAGCTGGTGCTCAACACTTGCCCTACGCGCTATGTCAATAATGTTTAGTAATTTATCTGATGATAATAACCGAACATATTATCCGCCGATTTTGCCTAAGATCGAGAAACCACAAGCACTGGAATTGTTTAAGAAACGTTTCTTTTCACTATTTTTCTCTACTCAATTAGCTGCTTCGGCCATTTCCACGCGAATGGTATCCGAAGTGAAACCGGGCAATCCAACGGAAAGCGGCGCTCAGAGTGATGATGAACAATGTGATTTTTTAGGTTTTGAGATTGATGAGAACAAGGACAGTGTACAGGATGATATAGATCAGACATTGGTTCAATACAGTGTTAGTACAGATAATGGTGAAATACAGATTTCGGTAGGTGAACCGACTCAGGACTATAAGAGAAAAGTTGTTGACGAACAGGACGTCATCGAATGCAAGCGTCCCAAATTGTAG
Protein Sequence
MSHVNSDDEDIRSEYTEQSANENEDEDDDQVDYMAEIRYNIMAHEEINTTNALYLNKCMQKSLKELRTQLQDMLKKCNEKYQANEMYLTRAANTSSSLTNSIGRPYSAYYCGAPYFKNHLLFSPPPNEDYLYRKNYLKEYFPMDRVDNKVNWVSKDKIFLIKAVKQQLIQFLESQQRDRIRQLRNNAKTSTQSEHESTEIIVDFNIKTLAQLYPMIETADREFIIDWYTISMQDLNGRHLPNACIAMWKNYLMPTLNRDPWTPEETEKLMDVAEAMNNQNWKVIAEQMQRRSAYQCLVQFKAMEAERNVLRNVKWTPSEDALLLASIEDLRVGNMIPWSNVVERMPGRKKIQVYTRYMFTLKPGICKEKFTVAEDCILMAAIKEYGTNFHMFPAKLLPGRTAVQIRNRYNNKLKYAANSRFWTRDDDERMMSLVEKYGPTNWVQIASEMEIFTRTRCRSRYVVITKFLEKNPDKTLRDVPLRHKPSTLNVTEENWMTTLIKEQCDANKPKDIQVKEKRVKEIPASSKLSANTVEMPAQSSRYRTMNQRMNNNMFEYLKYSYGFKMKPMLPPELLATDSSRVVCQLLYNAICPNDYQLLFGKDGIQIDLEYFGFSDRDQYNYVLPPSWCSTLALRAMSIMFSNLSDDNNRTYYPPILPKIEKPQALELFKKRFFSLFFSTQLAASAISTRMVSEVKPGNPTESGAQSDDEQCDFLGFEIDENKDSVQDDIDQTLVQYSVSTDNGEIQISVGEPTQDYKRKVVDEQDVIECKRPKL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-