Bhyb008872.1
Basic Information
- Insect
- Bolitophila hybrida
- Gene Symbol
- -
- Assembly
- GCA_027564075.1
- Location
- JANSTU010024094.1:6533-9587[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.4e-09 1.5e-05 24.8 0.0 4 35 20 52 18 60 0.92
Sequence Information
- Coding Sequence
- ATGGTCAGGAGTTACGCCTGCTTCCTTAAGCTAAAAGCACCCACCTGGAATCAGTCCCAACTGCATGAGGCCATTGCTGCAGTGGTCACGCAGAAGCTACGCTTCACCCAAGCATCGGCACGCTATAACATTCCCAAGGGTACACTATACGATAACATTCTGGGCAAATCCAATCGTATGCAGGTACTCGAAGAGGCCGGACTTGATGCATTCGCCGAAAAAGCCATTCTGGAGTTTTGCTGTGACGTCTCCGTGTCTCCGTATAATAGACGCACTAAAAAACCACTGTCAAAGATCCTCGAATTTGTTCAACACCTCAGCCAATCATCCGAAAGACCGTTTGAATTCACCAATAAGTTTGGCTTTCGTTGGTGGTGGGCATTCTGCAAGAAGTACTCCATCGTGTCACTATACTACAATGATACGGTCAGCGTGGATGCGTGTGACCGGAAACTGGGCATGATGCAGGCATTGCAACTGCAGAACATGGCCAGCCAGAAGAACGAGTACTGTGAAAATTGA
- Protein Sequence
- MVRSYACFLKLKAPTWNQSQLHEAIAAVVTQKLRFTQASARYNIPKGTLYDNILGKSNRMQVLEEAGLDAFAEKAILEFCCDVSVSPYNRRTKKPLSKILEFVQHLSQSSERPFEFTNKFGFRWWWAFCKKYSIVSLYYNDTVSVDACDRKLGMMQALQLQNMASQKNEYCEN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00210736;
- 90% Identity
- iTF_00210736;
- 80% Identity
- -