Bhyb009433.1
Basic Information
- Insect
- Bolitophila hybrida
- Gene Symbol
- -
- Assembly
- GCA_027564075.1
- Location
- JANSTU010002488.1:1-1453[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.9e-12 7.6e-09 35.3 0.0 1 45 52 96 52 96 0.92 2 2 0.058 1.1e+02 2.7 0.6 4 20 193 208 192 208 0.91
Sequence Information
- Coding Sequence
- AAAATCAGATACGATGAACCTCATTCACCGTTCACGGACAAGTCCTTCGAAGATGATGCAATGGACTCATCGAATCATTACTCGGTCGGAGACTCACGCATCACTTCGTACGCTCCACAACAAAAACCCGAATGGAAACGTTATAAACAGTACACCCGTGCCGATATTCTGTCTGCTATTGAATGTGTTAAAAATGGAATGAGTGCCTTGCAGGCATCTCGAAAGTTCGGTGTTCCATCGCGTACCTTGTATGACAAAGTAAAAAAAATGGGAATTACAACAGGTCGCCCAATGAATCATCGTTCAATCAAGCGTAGTCCATCGAATTCAGACAGTCCTTCGGCGGCATTCCCATACGGACTAAGCGGTACCAGCAGCCCTTACTCGCATTCAGAAATTAACTCTGCACCAATTCGTAACGAGTCTCCTGATCAAGAGACACATTCAAAACGTGAACATCATATGCAACCAACAATTCCACATCCAGCTGCAGCTCTATTGGATGCCAAATTCTTGCAACAAGCATTCGAGGCACGTGGTGGTGACATAGCTGGACGTGAAGCTCTGCATGCTATGGCTTTTGCGGCAGCCGCACACGCTGCCGTTAATGGCATATCCACAAGTCCTGGCACTCATGGGACAGCTCGATCACCAAGTCCAAGTATTCTCATGAAATACATGCGACCACCAACTATTCCATCACCATCAGACGACAAATTCATTTCACATGAGTCAACCGGTGTTGATGTTGCAAATGAGCAAACAGACATTGAACGAAACGAAGATCGAGTTGAAGACTTGTCAATGGCCAAGAGCAAGGATCTAGCAAGTGAGATGAAGCAAACGGGTGCAATTGTTCCTCCCAAGATCACTGTGACAACAGAAGAATCTAGTACACTGCCAGTATCTGCAAAACTAGAGATAGACGTCGCAGATGATTAA
- Protein Sequence
- KIRYDEPHSPFTDKSFEDDAMDSSNHYSVGDSRITSYAPQQKPEWKRYKQYTRADILSAIECVKNGMSALQASRKFGVPSRTLYDKVKKMGITTGRPMNHRSIKRSPSNSDSPSAAFPYGLSGTSSPYSHSEINSAPIRNESPDQETHSKREHHMQPTIPHPAAALLDAKFLQQAFEARGGDIAGREALHAMAFAAAAHAAVNGISTSPGTHGTARSPSPSILMKYMRPPTIPSPSDDKFISHESTGVDVANEQTDIERNEDRVEDLSMAKSKDLASEMKQTGAIVPPKITVTTEESSTLPVSAKLEIDVADD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -