Bhyb021626.1
Basic Information
- Insect
- Bolitophila hybrida
- Gene Symbol
- ttk
- Assembly
- GCA_027564075.1
- Location
- JANSTU010049505.1:5648-8702[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4 2.7e+03 -1.7 0.1 8 19 358 371 358 372 0.86 2 2 6.1e-17 1.2e-13 50.6 0.0 2 45 526 570 525 570 0.95
Sequence Information
- Coding Sequence
- ATGTCCGTGCagcagttttgtttacgctggaataaccatcagccgaattttatatctgtgttctcatcgcttttgcataatgaagctctagttgatgtcacattggcagcagaaggaagacaactgcaagcccacaaagttgtcctgtctgcgtgtagttcatattttcagtcattgttcacatcgaatccatgtcagcatcccatcgttattctgaaggatgttcaatataatgatctgaagactatggttgattttatgtactatggcgaagttaatgtatcccaagagcagttgcctcatattctcaaaacggctgagatgctaaagatcaagggtcttgccgaaatgcCCGATCCAGCAACGCTTACAAAATCAGAAAATAAATCGCCGGTTCAACCCGATAATAATACTgcaccaaacagtggtaacacaggcggcgaatcgatgtggggtaccgaaaatcatcaacaacaacaatttcaccaacaacagcagcagcagcagcagcagcaacaacagcagcagcaacaacaacagcagcagcaacaCGGACAACAGagaagaactccatcaccgggtgctatgtcaccatcggcaacCCGTCGGAAACGTCTTCGTAAATCATCTACAGGTTCAGGATCTGCATCCACTGAACGCGTCTCTGAGGAGCATAGTAGCATTGAAGGACCAATCGGATTAAACATGTCACAGTCACAGATGGATCAAATGTCCGCATTTGCACAGGCACCCACTAATCTATCGTCACAAGGCATGTCAAATACAAAAAAGGAATCATGCGGAAGTTCAGACGAAATACCACAACACGACTCATCCCAGGAAAGCGTAGAAGATGTTCACCATAGTCACCATCACATCCACCAAAACGTTATTCCTTTTTTCAAGAAATCCGATGGTGGTGAACTGTCTGGGATGACACAGCAGATGCCAATTGACATTACAAGTCCGACAACTCCTTCCGAGCATGGTTCATCCGTAAGTTGCCCCCAATCGCAACCATCACACTCAGGTGTGCAATGGACCGTAGTCGACTCGAACTATCCAAGGTTTGCGTTGTCATCGTGCCAGACGAACGTCGGTGGCATGTCAACTGCCGGTCACAGTAATCCGAACGAGAATCAGCACAGTTCAAGTACGACCTCAGCCAACACGGCGGCTTCTTCGACGCATACGCATAACATGCACGGCGGCGGTGGTGGCACTGGTGGTGGTGGCGGCGGAGCTAGCAGTTACCAAGGCGGTGGACCCTCATCGTATTCACCTCAGATTATATCTGTTAATCCTAGCAACTTAGTAAATAACTATCCTCCAAGCCTATCAACACCAACCTCTCCGCAGGGCAATTCAAATATGGTGCAGTCTGTGTATAGTCAAGGACctacacccaatcagtcaccaggacaacaacagcagcagcagcaacaacaacaacagcagcaacaacaacaacagcagcagcagcaaatgagtagcaatagtcaagcaactgccggtgctactactccccagcaagcagtgacacaaAAACGAAAGCGTTCGGTTAATCCACAAGGTGATGAGAATTTCTTGCGAGCCTTGGAAGCCGTTCGTTTCGGTGGTATTGGTTTCTGTAAGGCTGCTCGAATGTACGGTGTAAATAATCGAACATTATGGCTCGAATACAAAAAGCGTGGTTATCCAATCAGTCGACCAAGCATTAAAAATCGAATAAAACTAGAGCCAAACATGACACCACCACCATCATCGACACCCACAAATGAGGATAATACATCGATGGAAACATATGATCATATGTCACAGTCATCGTTAAATATGTCCGTACCGCCACCAGCCGACACGCCTACCTCGCTTATGTGTCCTCCGCACGCACATCCGATGGGCGTTATGAGTTTTCTAGACACACGACACGTTGAATTTGCTCCAGGAATACATCCGATGGCACGCCAAAGGTTTCCCGATGGTGCTGTTAATGTGAATACAACAGCAATGAATTTGCAGGGTCTCAACTTTAATTCCATGTAG
- Protein Sequence
- MSVQQFCLRWNNHQPNFISVFSSLLHNEALVDVTLAAEGRQLQAHKVVLSACSSYFQSLFTSNPCQHPIVILKDVQYNDLKTMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEMPDPATLTKSENKSPVQPDNNTAPNSGNTGGESMWGTENHQQQQFHQQQQQQQQQQQQQQQQQQQQQHGQQRRTPSPGAMSPSATRRKRLRKSSTGSGSASTERVSEEHSSIEGPIGLNMSQSQMDQMSAFAQAPTNLSSQGMSNTKKESCGSSDEIPQHDSSQESVEDVHHSHHHIHQNVIPFFKKSDGGELSGMTQQMPIDITSPTTPSEHGSSVSCPQSQPSHSGVQWTVVDSNYPRFALSSCQTNVGGMSTAGHSNPNENQHSSSTTSANTAASSTHTHNMHGGGGGTGGGGGGASSYQGGGPSSYSPQIISVNPSNLVNNYPPSLSTPTSPQGNSNMVQSVYSQGPTPNQSPGQQQQQQQQQQQQQQQQQQQQQMSSNSQATAGATTPQQAVTQKRKRSVNPQGDENFLRALEAVRFGGIGFCKAARMYGVNNRTLWLEYKKRGYPISRPSIKNRIKLEPNMTPPPSSTPTNEDNTSMETYDHMSQSSLNMSVPPPADTPTSLMCPPHAHPMGVMSFLDTRHVEFAPGIHPMARQRFPDGAVNVNTTAMNLQGLNFNSM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00210891;
- 90% Identity
- iTF_00211715;
- 80% Identity
- iTF_00211715;