Basic Information

Gene Symbol
ct
Assembly
GCA_027564075.1
Location
JANSTU010052838.1:3471-17237[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.7e-27 1.6e-23 82.6 0.0 3 72 358 428 356 433 0.95
2 3 3.9e-32 3.9e-28 97.4 0.0 3 77 760 835 758 837 0.96
3 3 2.2e-30 2.2e-26 91.8 0.0 3 75 1009 1082 1007 1086 0.95

Sequence Information

Coding Sequence
ATGATTTTGGCTTTAGTAGAGGAAGTAACAAGACTGAGTAGTGCACTGACTGTTCTGCAGGAAACGCACAATACACAAATACAACGGCTCGAAGAGCGTCTGGAAGCCAAGCGACAGCATATCTCAAGGCTTGAGTCTCGTTTGGACAAGCAGTCCGACTATGAGGATGTAAAAAAGGAGAACAGTGAGCTAAGATCAGTGGACGTATTACCAGATGCGAAACAATTTGAAGAGTTGCTGCTGGAACGGACGAAAGCGTTTGCTGCACAGGCAAATTCAACGATAATCACTGAAGAACCGCACTCAGCTGTCGCTACTACGCCACTTCGTCACATCAATTATCCAAAATTGTCTACTTCTTCGACACCACCACCACAGCATGCGTTACCACAACCACCAGCCTCGACTTCTACATCGAGCGCTGCTGCTTCCGCGACTAGTTCTGCAATTACTCATTGCAATTCCACAACAATTGCCACCACCAATACAACCACTACCACAACACCATCGTCTTTACTTCCACCGCCACTACAAAATGTCGATGCGTTTAGCTCATTTCTAGGCGAGGAGATTGTTAGCAATTGGCGGCGAGGTTTGGAACTTCCACCTCCGCCACCAGGTGTTGCCACTCTTCGCTCATCTATGCAATCGATGCAACTAAATCATCATATCCGTTCACCCTCAGCCGACGATCATGTAAGCACACATCGCCAGGACGACAAGAGCAGTCATCACGATGCCTCCTCGACAGCTAGCACACCCATTCTACAGGACAGTCGTTCCGATGAACAATTAAACGGAGGAGGAATTACACCAATGTCTTTGGCACGCTCTAAATCACCCGAGGACAATAACAATCACCTGGGCTCTCTGCCTCATGGTCCTGCCAATTTTCCGCTTGGTCTTCCCTTTCAATTCCCAGATCGTGGTCATTTCCGTTTCGCAGACGACCTTCAAATGCCACCTGGATCGATGGCCGGTCGTCTTGGTGACTCACTTATACCGAAAGGTGATCCAATGGAGGCAAAACTTCAGGAAATGTTGCGCTACAACATGGACAAGTATGCCAATCAAAATCTAGACACCCTGCATATATCGCGGCGCGTTCGTGAACTGCTGTCTGTCCACAATATCGGTCAACGTTTGTTTGCCAAATACGTGCTTGGCCTGTCCCAGGGCACCGTATCTGAACTGTTGTCCAAACCAAAGCCATGGGACAAGCTGACAGAGAAAGGACGTGACAGCTATCGCAAGATGCACGCCTGGGCGTGTGACGATAACGCTGTACTGCTGCTGAAATCATTGATCCCGAAAAAAGGTACTTTAGACTCTGGAATGCCTTCGTTCAATCGATCCGATGATGGAATGGCAGACGATAGAATTGCACATATTCTGTCCGAGGCTTCAAGCAtgataaagccaacacatccacaacaccatcacttgcagcagcaacaacaacaacaccaacaaatgcatcaccagcaactcagccagcaCAGTATGCAAGAAGACTCGCGCAGCAACGATGACTCCAAATCACCACATCCCGAGTGTGAGTCTCCGTTCTCGAGAGACTCCCAAAGCCGACGACTCCGAAAATACGACAATGACGACATTCCACACGACAAGGTCACACGTATCTATCACGAGGAACTGGCCAAGTTGATGTCACGTGGACCACGAGAATCCTTCCCAAGTATTCTTTTTCCACACTTTTTCAGTGGTGGTATGCCACCGAATGCTCAGATGCCCGACGAGAACATTCGAATGGCACTGGAAGCCTACCACCGTGAGATTTCAAAGTTACAACAAAACGGAGCCGGAAATATTCCCAACTTTCCAAATCTTCCTGGTTTATTGGCTCTACAACAACAAGCATTGAACGGTGCTCAAGATTTGTCCGTTAAAAAAGAGGGCAGCGTAAAGATGAATGGACAAACTCCATCACTAAACATGGATGAACTGAGCAAAGATAGCGAAGATCAACGTCACTTAGGCAGTGCCTTTAGTTTGGTACGACCCAAGCAAGAACCTGGTACAACACCAACTACAACAGCTTCATCTGCCGCTCCAAGTCCACTTGGTAATAACATTCTACCACCAGCAATGACACCCACCGATGATTTCTCATCAGCAGCAAGTCCATTGCAGCGTATGGCTTCCATCACAAACTCATTGATTTCACAGTCGCCAGTGTCCAGTCATCATAACAGTCCACAACGTCCATTAAAAGCTGTTTTGCCGCCCATTACCCAACAACAGTTTGACATGTTCAACAATCTGAATACTGAAGATATTGTGCGACGCGTCAAGGAAGCTCTATCGCAGTATTCCATAAGCCAACGTTTGTTTGGTGAATCTGTTCTGGGATTATCTCAGGGTTCAGTAAGTGATCTACTTGCACGTCCAAAACCCTGGCATATGCTTACGCAAAAGGGTCGAGAACCATTTATTCGAATGAAAATGTTCTTGGAAGATGATAATGCTGTACACAAACTTGTTGCCAGTCAATATAAGATTGCACCCGAAAAACTGATGCGTACAGGAAACTATAGTGGTTCACCACAGATTCCCCAGGGCATTGGTAAACAAATGCCACCAATGCAAAAAATGATGAGTGAAATGTCAAAACTACAACAGGAACAACATCTGATGCATATGCAACAAATGCAACAGCAAATGCCAATGCCATCCCAACAACAGGCAATGCTATTGACACCACCAGGTATGCCGCCACACCACCGAATCAGTTTGCCTTccgaagaaaagaaaccccaggtacctatggcggtgccagtacattcaccacaacaacaacagcagcagcaacagcagcaacaacaagcgcagcaacaacaacagcagcaacatcagcagcagcaacagcttcaacagcatcatctggctcagcaacaggcacaggctgcacaacaacagcatcatcagcaacaacaacagaatgcaatgcgtggaatgcatcagcacatgtcgcccacagtatacgaaatggctgcattaacCCAAGATCTGGATACACAAATCATTACCACCAAGATTAAGGAAGCATTGCTTGCCAATAACATTGGACAAAAGATCTTCGGTGAAGCAGTTCTTGGACTCTCGCAGGGCTCTGTATCGGAGCTTCTGTCCAAGCCCAAGCCATGGCATATGTTGAGCATCAAGGGACGCGAACCATTTATTCGAATGCAACTGTGGCTTGCTGATGCAAATAATGTAGACAGATTACAGGCATTAAAGAATGAACGTCGTGAGGCCAACAAAAGACGTCGTTCTACTGGTCCTGGTGTACAGGATAATAGTTCTGACACAAGCAGCAATGATACCTCTGAGTTTTACACAACCAATTCACCAGGTCCTGGTTCGGTATGCTCAGCAGGTGCACCACCCAACAAAAAGCAACGTGTACTTTTCTCGGAAGAGCAAAAAGAAGCTTTGCGACTGGCATTCGCCCTGGATCCATATCCAAATGTTGCTACAATTGAGTTTTTGGCTTCCGAGCTAGGTCTATCGAGCAGAACGATAACAAACTGGTTCCATAATCACCGAATGCGTCTAAAGCAACAGGTTCCCCATGGTGGACCAACTGAACCGGTGCCATCACGTGAAAATCAAACAGGACAACCTTTCGATCCCGTACAGTTTCGAATTTTACTGAATCAACGCCTAATGGAACAGCAAAAAGAACGTATGGGCCTAGCAGGTATGCCGATTCCCTATCCACCTTACTTTGCTGCAAATCCCAATTTAGCTGCGCTCATTGGTCGCGGTCTATTGCCAGGAAATGAAGCTGAACTGTCTGCACTTAATAATGCTTTTAAAGAACAAATGAGTGGTCTTGATCTAACAATGGGTTCACTTAAGCGTGAACGTGATGATGATTTCGATGAAATGGATGGTGATGATTGTGGTAATTCTGATGTTGAGGACGGTGATGACGATGATAATGCTGACGGTAAATCTGAGTCCAACAAAGATATGACATCCTTACAGTCCCTGCAGTCACGAACGTCACGAAGAAAACCAGCAGCTCCACAATGGGTGAATCCCGTGTGGCAAGATGACAAGAAACCCAAAACCTCTGCCGAAGATGAAGTTATTATAAATGGTGTATGTGTTATGCAACAAGCCGCCGACTATAGTCGACTAGGCGATGAGACAGTACGTGTCGAACCTCAAGCCGTTGCTGAACGCTTTAATAATGATGAAGATGAAGCAGCTTATCGTTCAGACGAAGATGATGAGGAAAGTCCAAAGAAACGTTCAGAAAATGAACGTGAACCAATGCGCAGCGTTGAAAATAATGCAGTCGATGACGAACAACCCAAGTCCGATACGATGCTTCAGACACTGAAATTGGAGGCTGAAGACATCGATACTGACCGGTGGGACTATTAA
Protein Sequence
MILALVEEVTRLSSALTVLQETHNTQIQRLEERLEAKRQHISRLESRLDKQSDYEDVKKENSELRSVDVLPDAKQFEELLLERTKAFAAQANSTIITEEPHSAVATTPLRHINYPKLSTSSTPPPQHALPQPPASTSTSSAAASATSSAITHCNSTTIATTNTTTTTTPSSLLPPPLQNVDAFSSFLGEEIVSNWRRGLELPPPPPGVATLRSSMQSMQLNHHIRSPSADDHVSTHRQDDKSSHHDASSTASTPILQDSRSDEQLNGGGITPMSLARSKSPEDNNNHLGSLPHGPANFPLGLPFQFPDRGHFRFADDLQMPPGSMAGRLGDSLIPKGDPMEAKLQEMLRYNMDKYANQNLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVLLLKSLIPKKGTLDSGMPSFNRSDDGMADDRIAHILSEASSMIKPTHPQHHHLQQQQQQHQQMHHQQLSQHSMQEDSRSNDDSKSPHPECESPFSRDSQSRRLRKYDNDDIPHDKVTRIYHEELAKLMSRGPRESFPSILFPHFFSGGMPPNAQMPDENIRMALEAYHREISKLQQNGAGNIPNFPNLPGLLALQQQALNGAQDLSVKKEGSVKMNGQTPSLNMDELSKDSEDQRHLGSAFSLVRPKQEPGTTPTTTASSAAPSPLGNNILPPAMTPTDDFSSAASPLQRMASITNSLISQSPVSSHHNSPQRPLKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGNYSGSPQIPQGIGKQMPPMQKMMSEMSKLQQEQHLMHMQQMQQQMPMPSQQQAMLLTPPGMPPHHRISLPSEEKKPQVPMAVPVHSPQQQQQQQQQQQQAQQQQQQQHQQQQQLQQHHLAQQQAQAAQQQHHQQQQQNAMRGMHQHMSPTVYEMAALTQDLDTQIITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLADANNVDRLQALKNERREANKRRRSTGPGVQDNSSDTSSNDTSEFYTTNSPGPGSVCSAGAPPNKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLASELGLSSRTITNWFHNHRMRLKQQVPHGGPTEPVPSRENQTGQPFDPVQFRILLNQRLMEQQKERMGLAGMPIPYPPYFAANPNLAALIGRGLLPGNEAELSALNNAFKEQMSGLDLTMGSLKRERDDDFDEMDGDDCGNSDVEDGDDDDNADGKSESNKDMTSLQSLQSRTSRRKPAAPQWVNPVWQDDKKPKTSAEDEVIINGVCVMQQAADYSRLGDETVRVEPQAVAERFNNDEDEAAYRSDEDDEESPKKRSENEREPMRSVENNAVDDEQPKSDTMLQTLKLEAEDIDTDRWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00211518;
90% Identity
iTF_00211518;
80% Identity
iTF_00211518;